RNA–Protein interactions for RNA: ENST00000476581.6

XPC-205, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 1 (best)

Gene XPC, Length 2,944 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-205ENST00000476581 CRBNQ96SW2 442 aa15.35■□□□□ 0.05
XPC-205ENST00000476581 RLBP1P12271 317 aa15.34■□□□□ 0.05
XPC-205ENST00000476581 C1orf141Q5JVX7 400 aa15.34■□□□□ 0.05
XPC-205ENST00000476581 PANK1Q8TE04 598 aa15.34■□□□□ 0.05
XPC-205ENST00000476581 TWISTNBQ3B726 338 aaPredicted RBP15.33■□□□□ 0.05
XPC-205ENST00000476581 PARP4Q9UKK3 1724 aaKnown RBP15.33■□□□□ 0.05
XPC-205ENST00000476581 JCADQ9P266 1359 aa15.33■□□□□ 0.04
XPC-205ENST00000476581 CALD1Q05682 793 aaKnown RBP15.33■□□□□ 0.04
XPC-205ENST00000476581 CLUAP1Q96AJ1 413 aa15.33■□□□□ 0.04
XPC-205ENST00000476581 SIPA1L3O60292 1781 aaPredicted RBP15.33■□□□□ 0.04
XPC-205ENST00000476581 SCN11AQ9UI33 1791 aa15.33■□□□□ 0.04
XPC-205ENST00000476581 HTATSF1O43719 755 aaKnown RBP15.33■□□□□ 0.04
XPC-205ENST00000476581 DDX54Q8TDD1 881 aaKnown RBP15.33■□□□□ 0.04
XPC-205ENST00000476581 NECTIN2Q92692 538 aa15.33■□□□□ 0.04
XPC-205ENST00000476581 ADAMTS7Q9UKP4 1686 aa15.32■□□□□ 0.04
XPC-205ENST00000476581 IL2RBP14784 551 aa15.32■□□□□ 0.04
XPC-205ENST00000476581 SMC4Q9NTJ3 1288 aa15.32■□□□□ 0.04
XPC-205ENST00000476581 TAF7Q15545 349 aaPredicted RBP15.32■□□□□ 0.04
XPC-205ENST00000476581 PRAMEF22A3QJZ6 481 aa15.31■□□□□ 0.04
XPC-205ENST00000476581 SLC39A6Q13433 755 aa15.31■□□□□ 0.04
XPC-205ENST00000476581 SLIT2O94813 1529 aa15.31■□□□□ 0.04
XPC-205ENST00000476581 NFATC2IPQ8NCF5 419 aa15.31■□□□□ 0.04
XPC-205ENST00000476581 ZCRB1Q8TBF4 217 aaKnown RBP15.31■□□□□ 0.04
XPC-205ENST00000476581 KDM3BQ7LBC6 1761 aa15.31■□□□□ 0.04
XPC-205ENST00000476581 NOB1Q9ULX3 412 aaKnown RBP15.3■□□□□ 0.04
XPC-205ENST00000476581 SPG7Q9UQ90 795 aa15.3■□□□□ 0.04
XPC-205ENST00000476581 BCL9LQ86UU0 1499 aa15.3■□□□□ 0.04
XPC-205ENST00000476581 DISP2A7MBM2 1401 aa15.29■□□□□ 0.04
XPC-205ENST00000476581 IFNL2Q8IZJ0 200 aa15.29■□□□□ 0.04
XPC-205ENST00000476581 TOGARAM1Q9Y4F4 1720 aa15.29■□□□□ 0.04
XPC-205ENST00000476581 NGLY1Q96IV0 654 aa15.29■□□□□ 0.04
XPC-205ENST00000476581 WNK3Q9BYP7 1800 aa15.28■□□□□ 0.04
XPC-205ENST00000476581 BTBD11A6QL63 1104 aa15.28■□□□□ 0.04
XPC-205ENST00000476581 TEFQ10587 303 aa15.28■□□□□ 0.04
XPC-205ENST00000476581 SPATA31A1Q5TZJ5 1347 aa15.28■□□□□ 0.04
XPC-205ENST00000476581 MRPL50Q8N5N7 158 aaKnown RBP15.28■□□□□ 0.04
XPC-205ENST00000476581 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.28■□□□□ 0.042e-6■■■□□ 16.5
XPC-205ENST00000476581 COG6Q9Y2V7 657 aa15.28■□□□□ 0.04
XPC-205ENST00000476581 KAT6BQ8WYB5 2073 aa15.27■□□□□ 0.03
XPC-205ENST00000476581 TRIM27P14373 513 aa15.27■□□□□ 0.03
XPC-205ENST00000476581 ZMYND15Q9H091 742 aa15.27■□□□□ 0.03
XPC-205ENST00000476581 CCDC9Q9Y3X0 531 aaKnown RBP15.27■□□□□ 0.03
XPC-205ENST00000476581 NWD2Q9ULI1 1742 aa15.27■□□□□ 0.03
XPC-205ENST00000476581 CANXP27824 592 aaKnown RBP15.27■□□□□ 0.03
XPC-205ENST00000476581 EIF4A1P60842 406 aaKnown RBP15.26■□□□□ 0.03
XPC-205ENST00000476581 SLC52A2Q9HAB3 445 aa15.26■□□□□ 0.03
XPC-205ENST00000476581 G2E3Q7L622 706 aa15.26■□□□□ 0.03
XPC-205ENST00000476581 SPATA31A5Q5VU36 1347 aa15.26■□□□□ 0.03
XPC-205ENST00000476581 SPATA31A7Q8IWB4 1347 aa15.26■□□□□ 0.03
XPC-205ENST00000476581 PCDH11XQ9BZA7 1347 aa15.25■□□□□ 0.03
XPC-205ENST00000476581 PCDH11YQ9BZA8 1340 aa15.25■□□□□ 0.03
XPC-205ENST00000476581 CT47B1P0C2W7 299 aaPredicted RBP15.25■□□□□ 0.03
XPC-205ENST00000476581 UNC5CLQ8IV45 518 aa15.24■□□□□ 0.03
XPC-205ENST00000476581 FAM98CQ17RN3 349 aaKnown RBP15.24■□□□□ 0.03
XPC-205ENST00000476581 DCAF5Q96JK2 942 aa15.24■□□□□ 0.03
XPC-205ENST00000476581 ANXA1P04083 346 aa15.23■□□□□ 0.03
XPC-205ENST00000476581 C5P01031 1676 aa15.23■□□□□ 0.03
XPC-205ENST00000476581 VSIG10Q8N0Z9 540 aa15.23■□□□□ 0.03
XPC-205ENST00000476581 SPATA31A6Q5VVP1 1343 aa15.23■□□□□ 0.03
XPC-205ENST00000476581 EIF2S2P20042 333 aaKnown RBP15.23■□□□□ 0.03
XPC-205ENST00000476581 ALDH1L2Q3SY69 923 aa15.23■□□□□ 0.03
XPC-205ENST00000476581 FNBP4Q8N3X1 1017 aaPredicted RBP15.23■□□□□ 0.03
XPC-205ENST00000476581 DAXXQ9UER7 740 aaPredicted RBP15.23■□□□□ 0.03
XPC-205ENST00000476581 MRC1P22897 1456 aa15.22■□□□□ 0.03
XPC-205ENST00000476581 SLC4A2P04920 1241 aa15.22■□□□□ 0.03
XPC-205ENST00000476581 ZKSCAN2Q63HK3 967 aa15.22■□□□□ 0.03
XPC-205ENST00000476581 ATF7IPQ6VMQ6 1270 aa15.22■□□□□ 0.03
XPC-205ENST00000476581 USP21Q9UK80 565 aa15.22■□□□□ 0.03
XPC-205ENST00000476581 ZNF790Q6PG37 636 aa15.21■□□□□ 0.03
XPC-205ENST00000476581 GLI3P10071 1580 aa15.21■□□□□ 0.03
XPC-205ENST00000476581 PIP4K2AP48426 406 aaPredicted RBP15.21■□□□□ 0.03
XPC-205ENST00000476581 SKAP1Q86WV1 359 aa15.21■□□□□ 0.03
XPC-205ENST00000476581 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.21■□□□□ 0.03
XPC-205ENST00000476581 ZNF496Q96IT1 587 aaPredicted RBP15.21■□□□□ 0.03
XPC-205ENST00000476581 ITGB4P16144 1822 aa15.21■□□□□ 0.03
XPC-205ENST00000476581 RGS12O14924 1447 aa15.21■□□□□ 0.02
XPC-205ENST00000476581 CABP4P57796 275 aa15.2■□□□□ 0.02
XPC-205ENST00000476581 NKX1-1Q15270 411 aaPredicted RBP15.2■□□□□ 0.02
XPC-205ENST00000476581 MEX3CQ5U5Q3 659 aaKnown RBP15.2■□□□□ 0.02
XPC-205ENST00000476581 TMEM57Q8N5G2 664 aa15.2■□□□□ 0.02
XPC-205ENST00000476581 FRAT2O75474 233 aaPredicted RBP15.2■□□□□ 0.02
XPC-205ENST00000476581 PROSER3Q2NL68 480 aa15.2■□□□□ 0.02
XPC-205ENST00000476581 FAM182BQ5T319 152 aa15.2■□□□□ 0.02
XPC-205ENST00000476581 AFF2P51816 1311 aa15.2■□□□□ 0.02
XPC-205ENST00000476581 SLC4A3P48751 1232 aa15.2■□□□□ 0.02
XPC-205ENST00000476581 MARCH10Q8NA82 808 aaPredicted RBP15.2■□□□□ 0.02
XPC-205ENST00000476581 PHAXQ9H814 394 aaKnown RBP15.2■□□□□ 0.02
XPC-205ENST00000476581 GIGYF1O75420 1035 aaPredicted RBP15.19■□□□□ 0.02
XPC-205ENST00000476581 PDE3AQ14432 1141 aa15.19■□□□□ 0.02
XPC-205ENST00000476581 DZIP1LQ8IYY4 767 aaKnown RBP15.19■□□□□ 0.02
XPC-205ENST00000476581 RRAGDQ9NQL2 400 aaPredicted RBP15.19■□□□□ 0.02
XPC-205ENST00000476581 HEG1Q9ULI3 1381 aa15.19■□□□□ 0.02
XPC-205ENST00000476581 F6X3S4 739 aa15.19■□□□□ 0.02
XPC-205ENST00000476581 EXOC5O00471 708 aa15.19■□□□□ 0.02
XPC-205ENST00000476581 CHPF2Q9P2E5 772 aa15.18■□□□□ 0.02
XPC-205ENST00000476581 TNS2Q63HR2 1409 aa15.18■□□□□ 0.02
XPC-205ENST00000476581 BRPF1P55201 1214 aaPredicted RBP15.18■□□□□ 0.02
XPC-205ENST00000476581 VPS72Q15906 364 aa15.18■□□□□ 0.02
XPC-205ENST00000476581 HDGFL1Q5TGJ6 251 aa15.18■□□□□ 0.02
XPC-205ENST00000476581 PIGBQ92521 554 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms