RNA–Protein interactions for RNA: ENST00000476517.1

CDKAL1-203, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 2

Gene CDKAL1, Length 840 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-203ENST00000476517 TATP17735 454 aaPredicted RBP15.91■□□□□ 0.14
CDKAL1-203ENST00000476517 POLA2Q14181 598 aa15.91■□□□□ 0.14
CDKAL1-203ENST00000476517 AKAP4Q5JQC9 854 aa15.91■□□□□ 0.14
CDKAL1-203ENST00000476517 EXOC6Q8TAG9 804 aa15.91■□□□□ 0.14
CDKAL1-203ENST00000476517 CRBNQ96SW2 442 aa15.91■□□□□ 0.14
CDKAL1-203ENST00000476517 BABAM1Q9NWV8 329 aa15.91■□□□□ 0.14
CDKAL1-203ENST00000476517 WDR17Q8IZU2 1322 aa15.91■□□□□ 0.14
CDKAL1-203ENST00000476517 NRAPQ86VF7 1730 aa15.91■□□□□ 0.14
CDKAL1-203ENST00000476517 SHANK3Q9BYB0 1731 aa15.91■□□□□ 0.14
CDKAL1-203ENST00000476517 MEGF6O75095 1541 aa15.9■□□□□ 0.14
CDKAL1-203ENST00000476517 FRAT1Q92837 279 aaPredicted RBP15.9■□□□□ 0.14
CDKAL1-203ENST00000476517 USP21Q9UK80 565 aa15.9■□□□□ 0.14
CDKAL1-203ENST00000476517 CEMIPQ8WUJ3 1361 aa15.89■□□□□ 0.13
CDKAL1-203ENST00000476517 TWISTNBQ3B726 338 aaPredicted RBP15.89■□□□□ 0.13
CDKAL1-203ENST00000476517 ZKSCAN2Q63HK3 967 aa15.89■□□□□ 0.13
CDKAL1-203ENST00000476517 TSPYL4Q9UJ04 414 aa15.89■□□□□ 0.13
CDKAL1-203ENST00000476517 SPG7Q9UQ90 795 aa15.89■□□□□ 0.13
CDKAL1-203ENST00000476517 N4BP2Q86UW6 1770 aaPredicted RBP15.88■□□□□ 0.13
CDKAL1-203ENST00000476517 IPO8O15397 1037 aaKnown RBP15.88■□□□□ 0.13
CDKAL1-203ENST00000476517 B4GALNT3Q6L9W6 998 aa15.88■□□□□ 0.13
CDKAL1-203ENST00000476517 BCL2L13Q9BXK5 485 aa15.88■□□□□ 0.13
CDKAL1-203ENST00000476517 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.88■□□□□ 0.13
CDKAL1-203ENST00000476517 SOS1Q07889 1333 aaPredicted RBP15.88■□□□□ 0.13
CDKAL1-203ENST00000476517 ADAMTS2O95450 1211 aa15.87■□□□□ 0.13
CDKAL1-203ENST00000476517 SSH1Q8WYL5 1049 aa15.87■□□□□ 0.13
CDKAL1-203ENST00000476517 VAMP4O75379 141 aa15.86■□□□□ 0.13
CDKAL1-203ENST00000476517 ATXN8OSP0DMR3 200 aa15.86■□□□□ 0.13
CDKAL1-203ENST00000476517 BRPF1P55201 1214 aaPredicted RBP15.86■□□□□ 0.13
CDKAL1-203ENST00000476517 AAMPQ13685 434 aa15.86■□□□□ 0.13
CDKAL1-203ENST00000476517 C20orf194Q5TEA3 1177 aa15.86■□□□□ 0.13
CDKAL1-203ENST00000476517 TOM1L2Q6ZVM7 507 aa15.86■□□□□ 0.13
CDKAL1-203ENST00000476517 FTSJ3Q8IY81 847 aaKnown RBP15.86■□□□□ 0.13
CDKAL1-203ENST00000476517 MRC1P22897 1456 aa15.85■□□□□ 0.13
CDKAL1-203ENST00000476517 BCL9LQ86UU0 1499 aa15.85■□□□□ 0.13
CDKAL1-203ENST00000476517 TEFQ10587 303 aa15.85■□□□□ 0.13
CDKAL1-203ENST00000476517 TAF7Q15545 349 aaPredicted RBP15.85■□□□□ 0.13
CDKAL1-203ENST00000476517 EVA1CP58658 441 aa15.84■□□□□ 0.13
CDKAL1-203ENST00000476517 C8orf58Q8NAV2 365 aa15.84■□□□□ 0.13
CDKAL1-203ENST00000476517 IL17REQ8NFR9 667 aa15.84■□□□□ 0.13
CDKAL1-203ENST00000476517 ATF5Q9Y2D1 282 aaPredicted RBP15.84■□□□□ 0.13
CDKAL1-203ENST00000476517 LAMB4A4D0S4 1761 aa15.83■□□□□ 0.12
CDKAL1-203ENST00000476517 ATF7IPQ6VMQ6 1270 aa15.83■□□□□ 0.12
CDKAL1-203ENST00000476517 DZIP1LQ8IYY4 767 aaKnown RBP15.83■□□□□ 0.12
CDKAL1-203ENST00000476517 TSPYL6Q8N831 410 aa15.83■□□□□ 0.12
CDKAL1-203ENST00000476517 CARD10Q9BWT7 1032 aa15.83■□□□□ 0.12
CDKAL1-203ENST00000476517 RNMTO43148 476 aaKnown RBP15.82■□□□□ 0.12
CDKAL1-203ENST00000476517 HSP90AB1P08238 724 aaKnown RBP15.82■□□□□ 0.12
CDKAL1-203ENST00000476517 DEFB132Q7Z7B7 95 aa15.82■□□□□ 0.12
CDKAL1-203ENST00000476517 ELL2O00472 640 aaPredicted RBP15.81■□□□□ 0.12
CDKAL1-203ENST00000476517 IFNL2Q8IZJ0 200 aa15.81■□□□□ 0.12
CDKAL1-203ENST00000476517 PANK1Q8TE04 598 aa15.81■□□□□ 0.12
CDKAL1-203ENST00000476517 ARHGAP45Q92619 1136 aa15.81■□□□□ 0.12
CDKAL1-203ENST00000476517 CHMP4AQ9BY43 222 aa15.81■□□□□ 0.12
CDKAL1-203ENST00000476517 PCDH11XQ9BZA7 1347 aa15.81■□□□□ 0.12
CDKAL1-203ENST00000476517 PCDH11YQ9BZA8 1340 aa15.81■□□□□ 0.12
CDKAL1-203ENST00000476517 STRN4Q9NRL3 753 aa15.81■□□□□ 0.12
CDKAL1-203ENST00000476517 NOB1Q9ULX3 412 aaKnown RBP15.81■□□□□ 0.12
CDKAL1-203ENST00000476517 PAPPAQ13219 1627 aa15.8■□□□□ 0.12
CDKAL1-203ENST00000476517 KDM6AO15550 1401 aaPredicted RBP15.8■□□□□ 0.12
CDKAL1-203ENST00000476517 MPRIPQ6WCQ1 1025 aa15.8■□□□□ 0.12
CDKAL1-203ENST00000476517 MRPL50Q8N5N7 158 aaKnown RBP15.8■□□□□ 0.12
CDKAL1-203ENST00000476517 COG6Q9Y2V7 657 aa15.8■□□□□ 0.12
CDKAL1-203ENST00000476517 TRIM27P14373 513 aa15.79■□□□□ 0.12
CDKAL1-203ENST00000476517 IL2RBP14784 551 aa15.79■□□□□ 0.12
CDKAL1-203ENST00000476517 PHKG2P15735 406 aa15.79■□□□□ 0.12
CDKAL1-203ENST00000476517 MVPQ14764 893 aaKnown RBP15.79■□□□□ 0.12
CDKAL1-203ENST00000476517 API5Q9BZZ5 524 aaKnown RBP15.79■□□□□ 0.12
CDKAL1-203ENST00000476517 CHMP4BQ9H444 224 aaKnown RBP15.79■□□□□ 0.12
CDKAL1-203ENST00000476517 BTG4Q9NY30 223 aa15.79■□□□□ 0.12
CDKAL1-203ENST00000476517 MIS18AQ9NYP9 233 aa15.79■□□□□ 0.12
CDKAL1-203ENST00000476517 UBR2Q8IWV8 1755 aa15.79■□□□□ 0.12
CDKAL1-203ENST00000476517 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.79■□□□□ 0.12
CDKAL1-203ENST00000476517 C5P01031 1676 aa15.79■□□□□ 0.12
CDKAL1-203ENST00000476517 BTBD11A6QL63 1104 aa15.78■□□□□ 0.12
CDKAL1-203ENST00000476517 IFFO2Q5TF58 517 aa15.78■□□□□ 0.12
CDKAL1-203ENST00000476517 GJD4Q96KN9 370 aaPredicted RBP15.78■□□□□ 0.12
CDKAL1-203ENST00000476517 STK31Q9BXU1 1019 aa15.78■□□□□ 0.12
CDKAL1-203ENST00000476517 LGR6Q9HBX8 967 aa15.78■□□□□ 0.12
CDKAL1-203ENST00000476517 DDX19BQ9UMR2 479 aa15.78■□□□□ 0.12
CDKAL1-203ENST00000476517 ITGB4P16144 1822 aa15.78■□□□□ 0.12
CDKAL1-203ENST00000476517 TOGARAM1Q9Y4F4 1720 aa15.77■□□□□ 0.12
CDKAL1-203ENST00000476517 PTPRCP08575 1304 aa15.77■□□□□ 0.12
CDKAL1-203ENST00000476517 HOXB7P09629 217 aa15.77■□□□□ 0.12
CDKAL1-203ENST00000476517 YY1P25490 414 aa15.77■□□□□ 0.12
CDKAL1-203ENST00000476517 LARP1Q6PKG0 1096 aaKnown RBP15.77■□□□□ 0.12
CDKAL1-203ENST00000476517 CLUAP1Q96AJ1 413 aa15.77■□□□□ 0.12
CDKAL1-203ENST00000476517 DCAF5Q96JK2 942 aa15.77■□□□□ 0.12
CDKAL1-203ENST00000476517 KRT24Q2M2I5 525 aa15.76■□□□□ 0.11
CDKAL1-203ENST00000476517 CCDC30Q5VVM6 783 aa15.76■□□□□ 0.11
CDKAL1-203ENST00000476517 ZCRB1Q8TBF4 217 aaKnown RBP15.76■□□□□ 0.11
CDKAL1-203ENST00000476517 RLBP1P12271 317 aa15.75■□□□□ 0.11
CDKAL1-203ENST00000476517 ITPRIPQ8IWB1 547 aa15.75■□□□□ 0.11
CDKAL1-203ENST00000476517 ABCC4O15439 1325 aa15.74■□□□□ 0.11
CDKAL1-203ENST00000476517 BRWD3Q6RI45 1802 aa15.74■□□□□ 0.11
CDKAL1-203ENST00000476517 PSDA5PKW4 1024 aaPredicted RBP15.74■□□□□ 0.11
CDKAL1-203ENST00000476517 SF3B2Q13435 895 aaKnown RBP15.74■□□□□ 0.11
CDKAL1-203ENST00000476517 CENPQQ7L2Z9 268 aaPredicted RBP15.74■□□□□ 0.11
CDKAL1-203ENST00000476517 RBM42Q9BTD8 480 aaKnown RBP15.74■□□□□ 0.11
CDKAL1-203ENST00000476517 SLC52A2Q9HAB3 445 aa15.74■□□□□ 0.11
CDKAL1-203ENST00000476517 TNNQ9UQP3 1299 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms