RNA–Protein interactions for RNA: ENST00000476126.1

SP140-209, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 463 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-209ENST00000476126 NPC1L1Q9UHC9 1359 aa9.37□□□□□ -0.91
SP140-209ENST00000476126 COL3A1P02461 1466 aaPredicted RBP9.36□□□□□ -0.91
SP140-209ENST00000476126 DIAPH1O60610 1272 aaKnown RBP9.36□□□□□ -0.91
SP140-209ENST00000476126 HMOX1P09601 288 aa9.36□□□□□ -0.91
SP140-209ENST00000476126 POLD1P28340 1107 aa9.36□□□□□ -0.91
SP140-209ENST00000476126 IL13P35225 146 aa9.36□□□□□ -0.91
SP140-209ENST00000476126 PIGBQ92521 554 aa9.36□□□□□ -0.91
SP140-209ENST00000476126 AK7Q96M32 723 aa9.36□□□□□ -0.91
SP140-209ENST00000476126 UBR2Q8IWV8 1755 aa9.36□□□□□ -0.91
SP140-209ENST00000476126 KDM6AO15550 1401 aaPredicted RBP9.36□□□□□ -0.91
SP140-209ENST00000476126 ADAMTS7Q9UKP4 1686 aa9.36□□□□□ -0.91
SP140-209ENST00000476126 MYH14Q7Z406 1995 aaKnown RBP9.35□□□□□ -0.91
SP140-209ENST00000476126 U2SURPO15042 1029 aaKnown RBP9.35□□□□□ -0.91
SP140-209ENST00000476126 SLC16A10Q8TF71 515 aa9.35□□□□□ -0.91
SP140-209ENST00000476126 DCAF5Q96JK2 942 aa9.35□□□□□ -0.91
SP140-209ENST00000476126 LOC102724428A0A0B4J2F2 783 aa9.34□□□□□ -0.91
SP140-209ENST00000476126 ATP6V1AP38606 617 aa9.34□□□□□ -0.91
SP140-209ENST00000476126 PTGER2P43116 358 aa9.34□□□□□ -0.91
SP140-209ENST00000476126 SIK1P57059 783 aa9.34□□□□□ -0.91
SP140-209ENST00000476126 CABP4P57796 275 aa9.34□□□□□ -0.91
SP140-209ENST00000476126 CFAP53Q96M91 514 aa9.34□□□□□ -0.91
SP140-209ENST00000476126 ARXQ96QS3 562 aa9.34□□□□□ -0.91
SP140-209ENST00000476126 ERVV-2B6SEH9 535 aa9.33□□□□□ -0.92
SP140-209ENST00000476126 PHF14O94880 888 aa9.33□□□□□ -0.92
SP140-209ENST00000476126 FLAD1Q8NFF5 587 aa9.33□□□□□ -0.92
SP140-209ENST00000476126 RBM42Q9BTD8 480 aaKnown RBP9.33□□□□□ -0.92
SP140-209ENST00000476126 FHDC1Q9C0D6 1143 aaPredicted RBP9.33□□□□□ -0.92
SP140-209ENST00000476126 ASAP1Q9ULH1 1129 aa9.33□□□□□ -0.92
SP140-209ENST00000476126 MRC1P22897 1456 aa9.33□□□□□ -0.92
SP140-209ENST00000476126 AKAP4Q5JQC9 854 aa9.32□□□□□ -0.92
SP140-209ENST00000476126 MSL1Q68DK7 614 aa9.32□□□□□ -0.92
SP140-209ENST00000476126 COL23A1Q86Y22 540 aaPredicted RBP9.32□□□□□ -0.92
SP140-209ENST00000476126 ATG3Q9NT62 314 aa9.32□□□□□ -0.92
SP140-209ENST00000476126 GNPATO15228 680 aa9.31□□□□□ -0.92
SP140-209ENST00000476126 LINC00116Q8NCU8 138 aa9.31□□□□□ -0.92
SP140-209ENST00000476126 SGIP1Q9BQI5 828 aa9.31□□□□□ -0.92
SP140-209ENST00000476126 N4BP2Q86UW6 1770 aaPredicted RBP9.31□□□□□ -0.92
SP140-209ENST00000476126 KIF13BQ9NQT8 1826 aa9.31□□□□□ -0.92
SP140-209ENST00000476126 NFATC2IPQ8NCF5 419 aa9.3□□□□□ -0.92
SP140-209ENST00000476126 SYT17Q9BSW7 474 aa9.3□□□□□ -0.92
SP140-209ENST00000476126 NUDCQ9Y266 331 aa9.3□□□□□ -0.92
SP140-209ENST00000476126 LAMB4A4D0S4 1761 aa9.29□□□□□ -0.92
SP140-209ENST00000476126 MAP3K5Q99683 1374 aa9.29□□□□□ -0.92
SP140-209ENST00000476126 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.29□□□□□ -0.92
SP140-209ENST00000476126 PTCD1O75127 700 aaKnown RBP9.29□□□□□ -0.92
SP140-209ENST00000476126 SSFA2P28290 1259 aa9.29□□□□□ -0.92
SP140-209ENST00000476126 PPP2R1AP30153 589 aa9.29□□□□□ -0.92
SP140-209ENST00000476126 ITPK1Q13572 414 aa9.29□□□□□ -0.92
SP140-209ENST00000476126 MTHFSDQ2M296 383 aaKnown RBP9.29□□□□□ -0.92
SP140-209ENST00000476126 PELP1Q8IZL8 1130 aaKnown RBP9.29□□□□□ -0.92
SP140-209ENST00000476126 AFDNP55196 1824 aaKnown RBP9.28□□□□□ -0.92
SP140-209ENST00000476126 KCPQ6ZWJ8 1503 aa9.28□□□□□ -0.92
SP140-209ENST00000476126 RNMTO43148 476 aaKnown RBP9.28□□□□□ -0.92
SP140-209ENST00000476126 GAS2L2Q8NHY3 880 aa9.28□□□□□ -0.92
SP140-209ENST00000476126 SLC52A2Q9HAB3 445 aa9.28□□□□□ -0.92
SP140-209ENST00000476126 RTCBQ9Y3I0 505 aaKnown RBP9.28□□□□□ -0.92
SP140-209ENST00000476126 BRCA1P38398 1863 aaKnown RBP9.28□□□□□ -0.92
SP140-209ENST00000476126 CACNA1SQ13698 1873 aa9.28□□□□□ -0.92
SP140-209ENST00000476126 NEFMP07197 916 aa9.27□□□□□ -0.93
SP140-209ENST00000476126 U2AF1L5P0DN76 240 aaPredicted RBP9.27□□□□□ -0.93
SP140-209ENST00000476126 YY1P25490 414 aa9.27□□□□□ -0.93
SP140-209ENST00000476126 PRKAR2BP31323 418 aa9.27□□□□□ -0.93
SP140-209ENST00000476126 U2AF1Q01081 240 aaKnown RBP eCLIP9.27□□□□□ -0.93
SP140-209ENST00000476126 TEFQ10587 303 aa9.27□□□□□ -0.93
SP140-209ENST00000476126 SMIM5Q71RC9 77 aa9.27□□□□□ -0.93
SP140-209ENST00000476126 LGR6Q9HBX8 967 aa9.27□□□□□ -0.93
SP140-209ENST00000476126 KIAA1551Q9HCM1 1747 aa9.27□□□□□ -0.93
SP140-209ENST00000476126 CNTNAP4Q9C0A0 1308 aa9.27□□□□□ -0.93
SP140-209ENST00000476126 KDM3BQ7LBC6 1761 aa9.27□□□□□ -0.93
SP140-209ENST00000476126 SCN7AQ01118 1682 aa9.26□□□□□ -0.93
SP140-209ENST00000476126 GNAT3A8MTJ3 354 aa9.26□□□□□ -0.93
SP140-209ENST00000476126 GPR162Q16538 588 aa9.26□□□□□ -0.93
SP140-209ENST00000476126 TRAPPC3LQ5T215 181 aa9.26□□□□□ -0.93
SP140-209ENST00000476126 AMIGO3Q86WK7 504 aa9.26□□□□□ -0.93
SP140-209ENST00000476126 TTC5Q8N0Z6 440 aa9.26□□□□□ -0.93
SP140-209ENST00000476126 SLC4A9Q96Q91 983 aa9.26□□□□□ -0.93
SP140-209ENST00000476126 BCORQ6W2J9 1755 aa9.26□□□□□ -0.93
SP140-209ENST00000476126 RFC4P35249 363 aa9.25□□□□□ -0.93
SP140-209ENST00000476126 SLC39A6Q13433 755 aa9.25□□□□□ -0.93
SP140-209ENST00000476126 NLGN2Q8NFZ4 835 aa9.25□□□□□ -0.93
SP140-209ENST00000476126 RSPH6AQ9H0K4 717 aa9.25□□□□□ -0.93
SP140-209ENST00000476126 ARFGEF1Q9Y6D6 1849 aa9.25□□□□□ -0.93
SP140-209ENST00000476126 CRKLP46109 303 aaKnown RBP9.24□□□□□ -0.93
SP140-209ENST00000476126 RC3H1Q5TC82 1133 aaKnown RBP9.24□□□□□ -0.93
SP140-209ENST00000476126 DLEC1Q9Y238 1755 aa9.24□□□□□ -0.93
SP140-209ENST00000476126 RPS6KA4O75676 772 aa9.23□□□□□ -0.93
SP140-209ENST00000476126 DDX10Q13206 875 aaKnown RBP9.23□□□□□ -0.93
SP140-209ENST00000476126 DNAJC10Q8IXB1 793 aa9.23□□□□□ -0.93
SP140-209ENST00000476126 RTF1Q92541 710 aaKnown RBP9.23□□□□□ -0.93
SP140-209ENST00000476126 CCDC88AQ3V6T2 1871 aa9.22□□□□□ -0.93
SP140-209ENST00000476126 MMP10P09238 476 aa9.22□□□□□ -0.93
SP140-209ENST00000476126 ARHGEF1Q92888 912 aaKnown RBP9.22□□□□□ -0.93
SP140-209ENST00000476126 PHACTR3Q96KR7 559 aa9.22□□□□□ -0.93
SP140-209ENST00000476126 CCDC87Q9NVE4 849 aa9.22□□□□□ -0.93
SP140-209ENST00000476126 CD2APQ9Y5K6 639 aa9.22□□□□□ -0.93
SP140-209ENST00000476126 MAPK8IP3Q9UPT6 1336 aa9.22□□□□□ -0.93
SP140-209ENST00000476126 COL15A1P39059 1388 aa9.22□□□□□ -0.93
SP140-209ENST00000476126 NRXN2Q9P2S2 1712 aa9.22□□□□□ -0.93
SP140-209ENST00000476126 FCHSD2O94868 740 aa9.21□□□□□ -0.94
SP140-209ENST00000476126 NLGN1Q8N2Q7 840 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms