RNA–Protein interactions for RNA: ENST00000475775.1

TRIM11-203, Transcript of tripartite motif containing 11, humanhuman

TSL 2

Gene TRIM11, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-203ENST00000475775 KIF13BQ9NQT8 1826 aa20.27■□□□□ 0.84
TRIM11-203ENST00000475775 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.27■□□□□ 0.84
TRIM11-203ENST00000475775 EYA1Q99502 592 aa20.27■□□□□ 0.84
TRIM11-203ENST00000475775 ZEB1P37275 1124 aaPredicted RBP20.26■□□□□ 0.83
TRIM11-203ENST00000475775 COL13A1Q5TAT6 717 aaPredicted RBP20.26■□□□□ 0.83
TRIM11-203ENST00000475775 IFNL2Q8IZJ0 200 aa20.26■□□□□ 0.83
TRIM11-203ENST00000475775 MAP2P11137 1827 aaKnown RBP20.25■□□□□ 0.83
TRIM11-203ENST00000475775 TMOD3Q9NYL9 352 aa20.25■□□□□ 0.83
TRIM11-203ENST00000475775 KIAA1551Q9HCM1 1747 aa20.24■□□□□ 0.83
TRIM11-203ENST00000475775 CAPN15O75808 1086 aa20.24■□□□□ 0.83
TRIM11-203ENST00000475775 HSPA5P11021 654 aaKnown RBP20.24■□□□□ 0.83
TRIM11-203ENST00000475775 TNNT2P45379 298 aaPredicted RBP20.24■□□□□ 0.83
TRIM11-203ENST00000475775 EIF4A2Q14240 407 aaKnown RBP20.23■□□□□ 0.83
TRIM11-203ENST00000475775 PIGBQ92521 554 aa20.23■□□□□ 0.83
TRIM11-203ENST00000475775 NMRK2Q9NPI5 230 aa20.23■□□□□ 0.83
TRIM11-203ENST00000475775 PHKG2P15735 406 aa20.22■□□□□ 0.83
TRIM11-203ENST00000475775 SSFA2P28290 1259 aa20.22■□□□□ 0.83
TRIM11-203ENST00000475775 BRCA1P38398 1863 aaKnown RBP20.22■□□□□ 0.83
TRIM11-203ENST00000475775 HTRA3P83110 453 aa20.21■□□□□ 0.83
TRIM11-203ENST00000475775 KLRG1Q96E93 195 aa20.21■□□□□ 0.83
TRIM11-203ENST00000475775 PANK3Q9H999 370 aa20.21■□□□□ 0.83
TRIM11-203ENST00000475775 BCS1LQ9Y276 419 aa20.21■□□□□ 0.83
TRIM11-203ENST00000475775 LOC102724428A0A0B4J2F2 783 aa20.2■□□□□ 0.82
TRIM11-203ENST00000475775 SIK1P57059 783 aa20.2■□□□□ 0.82
TRIM11-203ENST00000475775 ARHGAP27Q6ZUM4 889 aa20.2■□□□□ 0.82
TRIM11-203ENST00000475775 HSP90AB1P08238 724 aaKnown RBP20.19■□□□□ 0.82
TRIM11-203ENST00000475775 RBM46Q8TBY0 533 aaKnown RBP20.19■□□□□ 0.82
TRIM11-203ENST00000475775 PXDNLA1KZ92 1463 aa20.18■□□□□ 0.82
TRIM11-203ENST00000475775 JMYQ8N9B5 988 aa20.18■□□□□ 0.82
TRIM11-203ENST00000475775 LINC00116Q8NCU8 138 aa20.18■□□□□ 0.82
TRIM11-203ENST00000475775 ARFGEF1Q9Y6D6 1849 aa20.18■□□□□ 0.82
TRIM11-203ENST00000475775 A0A0G2JLW4 131 aa20.17■□□□□ 0.82
TRIM11-203ENST00000475775 MMP10P09238 476 aa20.17■□□□□ 0.82
TRIM11-203ENST00000475775 TGFB2P61812 414 aa20.17■□□□□ 0.82
TRIM11-203ENST00000475775 MORC1Q86VD1 984 aa20.17■□□□□ 0.82
TRIM11-203ENST00000475775 C16orf71Q8IYS4 520 aaPredicted RBP20.17■□□□□ 0.82
TRIM11-203ENST00000475775 AMOTQ4VCS5 1084 aa20.16■□□□□ 0.82
TRIM11-203ENST00000475775 TNS4Q8IZW8 715 aa20.16■□□□□ 0.82
TRIM11-203ENST00000475775 SBF1O95248 1867 aa20.16■□□□□ 0.82
TRIM11-203ENST00000475775 GNPATO15228 680 aa20.15■□□□□ 0.82
TRIM11-203ENST00000475775 ATP6V1AP38606 617 aa20.15■□□□□ 0.82
TRIM11-203ENST00000475775 PLEKHO1Q53GL0 409 aaPredicted RBP20.15■□□□□ 0.82
TRIM11-203ENST00000475775 DCAF5Q96JK2 942 aa20.15■□□□□ 0.82
TRIM11-203ENST00000475775 KNSTRNQ9Y448 316 aa20.15■□□□□ 0.82
TRIM11-203ENST00000475775 ERVV-2B6SEH9 535 aa20.14■□□□□ 0.81
TRIM11-203ENST00000475775 ASAP1Q9ULH1 1129 aa20.14■□□□□ 0.81
TRIM11-203ENST00000475775 FCHSD2O94868 740 aa20.13■□□□□ 0.81
TRIM11-203ENST00000475775 PRELPP51888 382 aa20.13■□□□□ 0.81
TRIM11-203ENST00000475775 FSTL1Q12841 308 aa20.13■□□□□ 0.81
TRIM11-203ENST00000475775 ITPK1Q13572 414 aa20.12■□□□□ 0.81
TRIM11-203ENST00000475775 ATG3Q9NT62 314 aa20.12■□□□□ 0.81
TRIM11-203ENST00000475775 KDRP35968 1356 aa20.11■□□□□ 0.81
TRIM11-203ENST00000475775 DPEP1P16444 411 aa20.11■□□□□ 0.81
TRIM11-203ENST00000475775 C1orf141Q5JVX7 400 aa20.11■□□□□ 0.81
TRIM11-203ENST00000475775 C9orf131Q5VYM1 1079 aa20.11■□□□□ 0.81
TRIM11-203ENST00000475775 ZNF530Q6P9A1 599 aaPredicted RBP20.1■□□□□ 0.81
TRIM11-203ENST00000475775 CABP4P57796 275 aa20.09■□□□□ 0.81
TRIM11-203ENST00000475775 NLGN1Q8N2Q7 840 aa20.09■□□□□ 0.81
TRIM11-203ENST00000475775 C4AP0C0L4 1744 aa20.09■□□□□ 0.81
TRIM11-203ENST00000475775 ZNF831Q5JPB2 1677 aa20.09■□□□□ 0.81
TRIM11-203ENST00000475775 KCPQ6ZWJ8 1503 aa20.08■□□□□ 0.81
TRIM11-203ENST00000475775 TRAPPC3LQ5T215 181 aa20.08■□□□□ 0.81
TRIM11-203ENST00000475775 RRAGCQ9HB90 399 aa20.08■□□□□ 0.81
TRIM11-203ENST00000475775 CCDC87Q9NVE4 849 aa20.08■□□□□ 0.81
TRIM11-203ENST00000475775 RTCBQ9Y3I0 505 aaKnown RBP20.08■□□□□ 0.81
TRIM11-203ENST00000475775 C10orf71Q711Q0 1435 aa20.08■□□□□ 0.8
TRIM11-203ENST00000475775 KDM2BQ8NHM5 1336 aa20.07■□□□□ 0.8
TRIM11-203ENST00000475775 TNRC6CQ9HCJ0 1690 aaKnown RBP20.07■□□□□ 0.8
TRIM11-203ENST00000475775 ADRA2BP18089 450 aa20.07■□□□□ 0.8
TRIM11-203ENST00000475775 MTHFSP49914 203 aa20.07■□□□□ 0.8
TRIM11-203ENST00000475775 RBM42Q9BTD8 480 aaKnown RBP20.07■□□□□ 0.8
TRIM11-203ENST00000475775 KDM6AO15550 1401 aaPredicted RBP20.07■□□□□ 0.8
TRIM11-203ENST00000475775 CCDC88AQ3V6T2 1871 aa20.07■□□□□ 0.8
TRIM11-203ENST00000475775 MYH14Q7Z406 1995 aaKnown RBP20.06■□□□□ 0.8
TRIM11-203ENST00000475775 SULT6B1Q6IMI4 303 aa20.06■□□□□ 0.8
TRIM11-203ENST00000475775 CNTNAP4Q9C0A0 1308 aa20.05■□□□□ 0.8
TRIM11-203ENST00000475775 KCNA3P22001 575 aa20.05■□□□□ 0.8
TRIM11-203ENST00000475775 RC3H1Q5TC82 1133 aaKnown RBP20.04■□□□□ 0.8
TRIM11-203ENST00000475775 AEBP1Q8IUX7 1158 aa20.04■□□□□ 0.8
TRIM11-203ENST00000475775 PARP3Q9Y6F1 533 aa20.04■□□□□ 0.8
TRIM11-203ENST00000475775 KIF7Q2M1P5 1343 aa20.03■□□□□ 0.8
TRIM11-203ENST00000475775 COL5A3P25940 1745 aaPredicted RBP20.03■□□□□ 0.8
TRIM11-203ENST00000475775 IL13P35225 146 aa20.03■□□□□ 0.8
TRIM11-203ENST00000475775 AMER1Q5JTC6 1135 aaPredicted RBP20.03■□□□□ 0.8
TRIM11-203ENST00000475775 ARHGEF1Q92888 912 aaKnown RBP20.03■□□□□ 0.8
TRIM11-203ENST00000475775 RNF181Q9P0P0 153 aa20.03■□□□□ 0.8
TRIM11-203ENST00000475775 PIM2Q9P1W9 311 aa20.03■□□□□ 0.8
TRIM11-203ENST00000475775 GYS1P13807 737 aa20.02■□□□□ 0.8
TRIM11-203ENST00000475775 RFC4P35249 363 aa20.01■□□□□ 0.79
TRIM11-203ENST00000475775 SMC1BQ8NDV3 1235 aa20.01■□□□□ 0.79
TRIM11-203ENST00000475775 HSPA1AP0DMV8 641 aaKnown RBP20■□□□□ 0.79
TRIM11-203ENST00000475775 HSPA1BP0DMV9 641 aaKnown RBP20■□□□□ 0.79
TRIM11-203ENST00000475775 AKAP4Q5JQC9 854 aa20■□□□□ 0.79
TRIM11-203ENST00000475775 SLC4A9Q96Q91 983 aa20■□□□□ 0.79
TRIM11-203ENST00000475775 RPS6KA4O75676 772 aa19.99■□□□□ 0.79
TRIM11-203ENST00000475775 DALRD3Q5D0E6 543 aaKnown RBP19.99■□□□□ 0.79
TRIM11-203ENST00000475775 PTCD1O75127 700 aaKnown RBP19.98■□□□□ 0.79
TRIM11-203ENST00000475775 NFATC2IPQ8NCF5 419 aa19.98■□□□□ 0.79
TRIM11-203ENST00000475775 DIAPH1O60610 1272 aaKnown RBP19.95■□□□□ 0.78
TRIM11-203ENST00000475775 MRC1P22897 1456 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms