RNA–Protein interactions for RNA: ENST00000475684.2

CCHCR1-212, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 786 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-212ENST00000475684 CGNL1Q0VF96 1302 aa14.39□□□□□ -0.11
CCHCR1-212ENST00000475684 RAPGEF4Q8WZA2 1011 aa14.38□□□□□ -0.11
CCHCR1-212ENST00000475684 SBNO2Q9Y2G9 1366 aa14.37□□□□□ -0.11
CCHCR1-212ENST00000475684 CREBZFQ9NS37 354 aa14.37□□□□□ -0.11
CCHCR1-212ENST00000475684 PARP3Q9Y6F1 533 aa14.37□□□□□ -0.11
CCHCR1-212ENST00000475684 ARFGEF1Q9Y6D6 1849 aa14.36□□□□□ -0.11
CCHCR1-212ENST00000475684 RAB3GAP2Q9H2M9 1393 aa14.36□□□□□ -0.11
CCHCR1-212ENST00000475684 LOC102724428A0A0B4J2F2 783 aa14.36□□□□□ -0.11
CCHCR1-212ENST00000475684 GLTPD2A6NH11 291 aa14.36□□□□□ -0.11
CCHCR1-212ENST00000475684 TATP17735 454 aaPredicted RBP14.36□□□□□ -0.11
CCHCR1-212ENST00000475684 HOXC9P31274 260 aa14.36□□□□□ -0.11
CCHCR1-212ENST00000475684 AMPHP49418 695 aa14.36□□□□□ -0.11
CCHCR1-212ENST00000475684 SIK1P57059 783 aa14.36□□□□□ -0.11
CCHCR1-212ENST00000475684 TRAPPC3LQ5T215 181 aa14.36□□□□□ -0.11
CCHCR1-212ENST00000475684 USHBP1Q8N6Y0 703 aa14.36□□□□□ -0.11
CCHCR1-212ENST00000475684 PCDH11XQ9BZA7 1347 aa14.36□□□□□ -0.11
CCHCR1-212ENST00000475684 PCDH11YQ9BZA8 1340 aa14.36□□□□□ -0.11
CCHCR1-212ENST00000475684 BRCA1P38398 1863 aaKnown RBP14.35□□□□□ -0.11
CCHCR1-212ENST00000475684 LBX1P52954 281 aa14.35□□□□□ -0.11
CCHCR1-212ENST00000475684 NBPF6Q5VWK0 638 aa14.35□□□□□ -0.11
CCHCR1-212ENST00000475684 PIGBQ92521 554 aa14.35□□□□□ -0.11
CCHCR1-212ENST00000475684 NBPF4Q96M43 638 aa14.35□□□□□ -0.11
CCHCR1-212ENST00000475684 ZC3H4Q9UPT8 1303 aaKnown RBP14.35□□□□□ -0.11
CCHCR1-212ENST00000475684 RGPD2P0DJD1 1756 aa14.34□□□□□ -0.11
CCHCR1-212ENST00000475684 CCDC85CA6NKD9 419 aa14.34□□□□□ -0.11
CCHCR1-212ENST00000475684 ATP6V1AP38606 617 aa14.34□□□□□ -0.11
CCHCR1-212ENST00000475684 ITPK1Q13572 414 aa14.34□□□□□ -0.11
CCHCR1-212ENST00000475684 HDGFL2Q7Z4V5 671 aaPredicted RBP14.34□□□□□ -0.11
CCHCR1-212ENST00000475684 C4AP0C0L4 1744 aa14.33□□□□□ -0.12
CCHCR1-212ENST00000475684 TMC1Q8TDI8 760 aa14.33□□□□□ -0.12
CCHCR1-212ENST00000475684 RTCBQ9Y3I0 505 aaKnown RBP14.33□□□□□ -0.12
CCHCR1-212ENST00000475684 MAP3K19Q56UN5 1328 aa14.33□□□□□ -0.12
CCHCR1-212ENST00000475684 RGS19P49795 217 aa14.32□□□□□ -0.12
CCHCR1-212ENST00000475684 RASSF7Q02833 373 aa14.32□□□□□ -0.12
CCHCR1-212ENST00000475684 CD163L1Q9NR16 1453 aa14.31□□□□□ -0.12
CCHCR1-212ENST00000475684 CYP27B1O15528 508 aa14.31□□□□□ -0.12
CCHCR1-212ENST00000475684 GYS1P13807 737 aa14.31□□□□□ -0.12
CCHCR1-212ENST00000475684 LMNB1P20700 586 aa14.31□□□□□ -0.12
CCHCR1-212ENST00000475684 FBLN1P23142 703 aa14.31□□□□□ -0.12
CCHCR1-212ENST00000475684 ARHGEF1Q92888 912 aaKnown RBP14.31□□□□□ -0.12
CCHCR1-212ENST00000475684 CNTNAP1P78357 1384 aa14.31□□□□□ -0.12
CCHCR1-212ENST00000475684 EDC4Q6P2E9 1401 aaKnown RBP14.31□□□□□ -0.12
CCHCR1-212ENST00000475684 SBF1O95248 1867 aa14.3□□□□□ -0.12
CCHCR1-212ENST00000475684 CHRNA5P30532 468 aa14.3□□□□□ -0.12
CCHCR1-212ENST00000475684 ITGB4P16144 1822 aa14.29□□□□□ -0.12
CCHCR1-212ENST00000475684 POTECB2RU33 542 aa14.29□□□□□ -0.12
CCHCR1-212ENST00000475684 RFC4P35249 363 aa14.29□□□□□ -0.12
CCHCR1-212ENST00000475684 VEGFBP49765 207 aa14.29□□□□□ -0.12
CCHCR1-212ENST00000475684 CHADLQ6NUI6 762 aa14.29□□□□□ -0.12
CCHCR1-212ENST00000475684 WBP1LQ9NX94 342 aa14.29□□□□□ -0.12
CCHCR1-212ENST00000475684 ASAP1Q9ULH1 1129 aa14.29□□□□□ -0.12
CCHCR1-212ENST00000475684 MAP2P11137 1827 aaKnown RBP14.29□□□□□ -0.12
CCHCR1-212ENST00000475684 KDM6AO15550 1401 aaPredicted RBP14.28□□□□□ -0.12
CCHCR1-212ENST00000475684 DPY19L2Q6NUT2 758 aa14.28□□□□□ -0.12
CCHCR1-212ENST00000475684 COG3Q96JB2 828 aa14.28□□□□□ -0.12
CCHCR1-212ENST00000475684 SLC12A5Q9H2X9 1139 aa14.28□□□□□ -0.12
CCHCR1-212ENST00000475684 HSPA8P11142 646 aaKnown RBP14.27□□□□□ -0.13
CCHCR1-212ENST00000475684 TERF2IPQ9NYB0 399 aa14.27□□□□□ -0.13
CCHCR1-212ENST00000475684 TMOD3Q9NYL9 352 aa14.27□□□□□ -0.13
CCHCR1-212ENST00000475684 SMG6Q86US8 1419 aaKnown RBP14.26□□□□□ -0.13
CCHCR1-212ENST00000475684 CFAP44Q96MT7 982 aa14.25□□□□□ -0.13
CCHCR1-212ENST00000475684 NKX1-1Q15270 411 aaPredicted RBP14.24□□□□□ -0.13
CCHCR1-212ENST00000475684 TNRC18O15417 2968 aaPredicted RBP14.24□□□□□ -0.13
CCHCR1-212ENST00000475684 A0A1W2PP64 1363 aa14.23□□□□□ -0.13
CCHCR1-212ENST00000475684 RTL1A6NKG5 1358 aa14.23□□□□□ -0.13
CCHCR1-212ENST00000475684 RPS6KA4O75676 772 aa14.23□□□□□ -0.13
CCHCR1-212ENST00000475684 SLC4A2P04920 1241 aa14.23□□□□□ -0.13
CCHCR1-212ENST00000475684 RRS1Q15050 365 aaKnown RBP14.23□□□□□ -0.13
CCHCR1-212ENST00000475684 RC3H1Q5TC82 1133 aaKnown RBP14.23□□□□□ -0.13
CCHCR1-212ENST00000475684 ATG3Q9NT62 314 aa14.23□□□□□ -0.13
CCHCR1-212ENST00000475684 TIAM2Q8IVF5 1701 aa14.22□□□□□ -0.13
CCHCR1-212ENST00000475684 TMEM88BA6NKF7 163 aa14.22□□□□□ -0.13
CCHCR1-212ENST00000475684 POTEIP0CG38 1075 aa14.22□□□□□ -0.13
CCHCR1-212ENST00000475684 POTEJP0CG39 1038 aa14.22□□□□□ -0.13
CCHCR1-212ENST00000475684 DDR1Q08345 913 aa14.22□□□□□ -0.13
CCHCR1-212ENST00000475684 MAP2K1Q02750 393 aaPredicted RBP14.21□□□□□ -0.13
CCHCR1-212ENST00000475684 FKBP8Q14318 412 aa14.21□□□□□ -0.13
CCHCR1-212ENST00000475684 RBM42Q9BTD8 480 aaKnown RBP14.21□□□□□ -0.13
CCHCR1-212ENST00000475684 SPG7Q9UQ90 795 aa14.21□□□□□ -0.13
CCHCR1-212ENST00000475684 ROCK2O75116 1388 aaKnown RBP14.21□□□□□ -0.14
CCHCR1-212ENST00000475684 PASKQ96RG2 1323 aa14.2□□□□□ -0.14
CCHCR1-212ENST00000475684 SRP68Q9UHB9 627 aaKnown RBP14.2□□□□□ -0.14
CCHCR1-212ENST00000475684 CNTNAP4Q9C0A0 1308 aa14.19□□□□□ -0.14
CCHCR1-212ENST00000475684 HSP90AB2PQ58FF8 381 aa14.19□□□□□ -0.14
CCHCR1-212ENST00000475684 SLC4A9Q96Q91 983 aa14.19□□□□□ -0.14
CCHCR1-212ENST00000475684 VIRMAQ69YN4 1812 aaKnown RBP14.19□□□□□ -0.14
CCHCR1-212ENST00000475684 NFKBIEO00221 500 aa14.18□□□□□ -0.14
CCHCR1-212ENST00000475684 DEFB115Q30KQ5 88 aa14.18□□□□□ -0.14
CCHCR1-212ENST00000475684 ERFEQ4G0M1 354 aa14.18□□□□□ -0.14
CCHCR1-212ENST00000475684 TTLL6Q8N841 843 aa14.18□□□□□ -0.14
CCHCR1-212ENST00000475684 KDRP35968 1356 aa14.18□□□□□ -0.14
CCHCR1-212ENST00000475684 POLRMTO00411 1230 aaKnown RBP14.17□□□□□ -0.14
CCHCR1-212ENST00000475684 RNF39Q9H2S5 420 aa14.17□□□□□ -0.14
CCHCR1-212ENST00000475684 INSRP06213 1382 aa14.17□□□□□ -0.14
CCHCR1-212ENST00000475684 WDR33Q9C0J8 1336 aaKnown RBP14.16□□□□□ -0.14
CCHCR1-212ENST00000475684 DDNO94850 711 aaPredicted RBP14.16□□□□□ -0.14
CCHCR1-212ENST00000475684 TM4SF1P30408 202 aa14.16□□□□□ -0.14
CCHCR1-212ENST00000475684 LDHDQ86WU2 507 aa14.16□□□□□ -0.14
CCHCR1-212ENST00000475684 L3MBTL2Q969R5 705 aa14.16□□□□□ -0.14
CCHCR1-212ENST00000475684 USP42Q9H9J4 1324 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms