RNA–Protein interactions for RNA: ENST00000475663.2

NIPAL3-206, Transcript of NIPA like domain containing 3, humanhuman

TSL 3

Gene NIPAL3, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-206ENST00000475663 LINC00116Q8NCU8 138 aa17.64■□□□□ 0.41
NIPAL3-206ENST00000475663 SLC4A9Q96Q91 983 aa17.64■□□□□ 0.41
NIPAL3-206ENST00000475663 RSPH6AQ9H0K4 717 aa17.64■□□□□ 0.41
NIPAL3-206ENST00000475663 PPP1R1BQ9UD71 204 aaPredicted RBP17.64■□□□□ 0.41
NIPAL3-206ENST00000475663 NUDCQ9Y266 331 aa17.64■□□□□ 0.41
NIPAL3-206ENST00000475663 ATP6V1AP38606 617 aa17.63■□□□□ 0.41
NIPAL3-206ENST00000475663 PTCD1O75127 700 aaKnown RBP17.62■□□□□ 0.41
NIPAL3-206ENST00000475663 PTGER2P43116 358 aa17.62■□□□□ 0.41
NIPAL3-206ENST00000475663 COL23A1Q86Y22 540 aaPredicted RBP17.62■□□□□ 0.41
NIPAL3-206ENST00000475663 PHF14O94880 888 aa17.61■□□□□ 0.41
NIPAL3-206ENST00000475663 SLC39A6Q13433 755 aa17.61■□□□□ 0.41
NIPAL3-206ENST00000475663 MTFR1LQ9H019 292 aa17.61■□□□□ 0.41
NIPAL3-206ENST00000475663 MSL1Q68DK7 614 aa17.6■□□□□ 0.41
NIPAL3-206ENST00000475663 AK7Q96M32 723 aa17.6■□□□□ 0.41
NIPAL3-206ENST00000475663 SLC52A2Q9HAB3 445 aa17.6■□□□□ 0.41
NIPAL3-206ENST00000475663 RALBP1Q15311 655 aa17.58■□□□□ 0.4
NIPAL3-206ENST00000475663 IL17REQ8NFR9 667 aa17.58■□□□□ 0.4
NIPAL3-206ENST00000475663 GAS2L2Q8NHY3 880 aa17.58■□□□□ 0.4
NIPAL3-206ENST00000475663 C5P01031 1676 aa17.58■□□□□ 0.4
NIPAL3-206ENST00000475663 MAP3K5Q99683 1374 aa17.57■□□□□ 0.4
NIPAL3-206ENST00000475663 TUBGCP6Q96RT7 1819 aa17.57■□□□□ 0.4
NIPAL3-206ENST00000475663 GNAT3A8MTJ3 354 aa17.57■□□□□ 0.4
NIPAL3-206ENST00000475663 GNPATO15228 680 aa17.57■□□□□ 0.4
NIPAL3-206ENST00000475663 SGIP1Q9BQI5 828 aa17.57■□□□□ 0.4
NIPAL3-206ENST00000475663 C4BP0C0L5 1744 aa17.56■□□□□ 0.4
NIPAL3-206ENST00000475663 FCHSD2O94868 740 aa17.56■□□□□ 0.4
NIPAL3-206ENST00000475663 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.55■□□□□ 0.4
NIPAL3-206ENST00000475663 DCTN1Q14203 1278 aa17.55■□□□□ 0.4
NIPAL3-206ENST00000475663 KLHL34Q8N239 644 aa17.55■□□□□ 0.4
NIPAL3-206ENST00000475663 SCN11AQ9UI33 1791 aa17.53■□□□□ 0.4
NIPAL3-206ENST00000475663 MYBBP1AQ9BQG0 1328 aaKnown RBP17.53■□□□□ 0.4
NIPAL3-206ENST00000475663 MCM10Q7L590 875 aa17.53■□□□□ 0.4
NIPAL3-206ENST00000475663 SLC16A10Q8TF71 515 aa17.53■□□□□ 0.4
NIPAL3-206ENST00000475663 ARXQ96QS3 562 aa17.53■□□□□ 0.4
NIPAL3-206ENST00000475663 FHDC1Q9C0D6 1143 aaPredicted RBP17.53■□□□□ 0.4
NIPAL3-206ENST00000475663 TAF1LQ8IZX4 1826 aa17.53■□□□□ 0.4
NIPAL3-206ENST00000475663 MRC1P22897 1456 aa17.52■□□□□ 0.4
NIPAL3-206ENST00000475663 ZNF316A6NFI3 1004 aaPredicted RBP17.52■□□□□ 0.4
NIPAL3-206ENST00000475663 TEFQ10587 303 aa17.52■□□□□ 0.4
NIPAL3-206ENST00000475663 DNAJC10Q8IXB1 793 aa17.52■□□□□ 0.4
NIPAL3-206ENST00000475663 KCNQ3O43525 872 aa17.51■□□□□ 0.39
NIPAL3-206ENST00000475663 CRKLP46109 303 aaKnown RBP17.51■□□□□ 0.39
NIPAL3-206ENST00000475663 PRKRIP1Q9H875 184 aaPredicted RBP17.51■□□□□ 0.39
NIPAL3-206ENST00000475663 PLEKHF1Q96S99 279 aa17.5■□□□□ 0.39
NIPAL3-206ENST00000475663 SSFA2P28290 1259 aa17.49■□□□□ 0.39
NIPAL3-206ENST00000475663 POLD1P28340 1107 aa17.49■□□□□ 0.39
NIPAL3-206ENST00000475663 FLAD1Q8NFF5 587 aa17.49■□□□□ 0.39
NIPAL3-206ENST00000475663 RTCBQ9Y3I0 505 aaKnown RBP17.49■□□□□ 0.39
NIPAL3-206ENST00000475663 QSER1Q2KHR3 1735 aa17.49■□□□□ 0.39
NIPAL3-206ENST00000475663 ADAMTS7Q9UKP4 1686 aa17.48■□□□□ 0.39
NIPAL3-206ENST00000475663 CCDC146Q8IYE0 955 aa17.48■□□□□ 0.39
NIPAL3-206ENST00000475663 TTC5Q8N0Z6 440 aa17.48■□□□□ 0.39
NIPAL3-206ENST00000475663 RTF1Q92541 710 aaKnown RBP17.48■□□□□ 0.39
NIPAL3-206ENST00000475663 SYT17Q9BSW7 474 aa17.48■□□□□ 0.39
NIPAL3-206ENST00000475663 THUMPD2Q9BTF0 503 aaKnown RBP17.48■□□□□ 0.39
NIPAL3-206ENST00000475663 CNTNAP4Q9C0A0 1308 aa17.47■□□□□ 0.39
NIPAL3-206ENST00000475663 KCPQ6ZWJ8 1503 aa17.47■□□□□ 0.39
NIPAL3-206ENST00000475663 RC3H1Q5TC82 1133 aaKnown RBP17.47■□□□□ 0.39
NIPAL3-206ENST00000475663 INTS5Q6P9B9 1019 aaKnown RBP17.47■□□□□ 0.39
NIPAL3-206ENST00000475663 ARHGEF1Q92888 912 aaKnown RBP17.47■□□□□ 0.39
NIPAL3-206ENST00000475663 ZNF496Q96IT1 587 aaPredicted RBP17.47■□□□□ 0.39
NIPAL3-206ENST00000475663 CEMIPQ8WUJ3 1361 aa17.47■□□□□ 0.39
NIPAL3-206ENST00000475663 BTBD11A6QL63 1104 aa17.46■□□□□ 0.39
NIPAL3-206ENST00000475663 RPS6KA4O75676 772 aa17.46■□□□□ 0.39
NIPAL3-206ENST00000475663 NEFMP07197 916 aa17.46■□□□□ 0.39
NIPAL3-206ENST00000475663 HMGB2P26583 209 aaKnown RBP17.46■□□□□ 0.39
NIPAL3-206ENST00000475663 TRAPPC3LQ5T215 181 aa17.46■□□□□ 0.39
NIPAL3-206ENST00000475663 ZNF790Q6PG37 636 aa17.46■□□□□ 0.39
NIPAL3-206ENST00000475663 MIS18AQ9NYP9 233 aa17.46■□□□□ 0.39
NIPAL3-206ENST00000475663 UBR3Q6ZT12 1888 aa17.46■□□□□ 0.38
NIPAL3-206ENST00000475663 MAPK8IP3Q9UPT6 1336 aa17.46■□□□□ 0.38
NIPAL3-206ENST00000475663 TJP1Q07157 1748 aa17.45■□□□□ 0.38
NIPAL3-206ENST00000475663 CYP19A1P11511 503 aaPredicted RBP17.45■□□□□ 0.38
NIPAL3-206ENST00000475663 SRP68Q9UHB9 627 aaKnown RBP17.45■□□□□ 0.38
NIPAL3-206ENST00000475663 RRP7AQ9Y3A4 280 aaKnown RBP17.45■□□□□ 0.38
NIPAL3-206ENST00000475663 NFE2L2Q16236 605 aa17.44■□□□□ 0.38
NIPAL3-206ENST00000475663 CCDC184Q52MB2 194 aa17.44■□□□□ 0.38
NIPAL3-206ENST00000475663 NLGN2Q8NFZ4 835 aa17.44■□□□□ 0.38
NIPAL3-206ENST00000475663 CCDC87Q9NVE4 849 aa17.44■□□□□ 0.38
NIPAL3-206ENST00000475663 VIRMAQ69YN4 1812 aaKnown RBP17.43■□□□□ 0.38
NIPAL3-206ENST00000475663 PRAMEF22A3QJZ6 481 aa17.43■□□□□ 0.38
NIPAL3-206ENST00000475663 WDR43Q15061 677 aaKnown RBP eCLIP17.43■□□□□ 0.38
NIPAL3-206ENST00000475663 ADAMTS8Q9UP79 889 aa17.43■□□□□ 0.38
NIPAL3-206ENST00000475663 ZBTB1Q9Y2K1 713 aa17.43■□□□□ 0.38
NIPAL3-206ENST00000475663 COL5A3P25940 1745 aaPredicted RBP17.43■□□□□ 0.38
NIPAL3-206ENST00000475663 CANXP27824 592 aaKnown RBP17.42■□□□□ 0.38
NIPAL3-206ENST00000475663 RFC4P35249 363 aa17.42■□□□□ 0.38
NIPAL3-206ENST00000475663 NEUROD2Q15784 382 aa17.42■□□□□ 0.38
NIPAL3-206ENST00000475663 HEG1Q9ULI3 1381 aa17.41■□□□□ 0.38
NIPAL3-206ENST00000475663 MYH14Q7Z406 1995 aaKnown RBP17.41■□□□□ 0.38
NIPAL3-206ENST00000475663 HTATSF1O43719 755 aaKnown RBP17.41■□□□□ 0.38
NIPAL3-206ENST00000475663 PIP4K2AP48426 406 aaPredicted RBP17.41■□□□□ 0.38
NIPAL3-206ENST00000475663 ZNF831Q5JPB2 1677 aa17.41■□□□□ 0.38
NIPAL3-206ENST00000475663 MMP10P09238 476 aa17.4■□□□□ 0.38
NIPAL3-206ENST00000475663 GYS1P13807 737 aa17.4■□□□□ 0.38
NIPAL3-206ENST00000475663 RIPK4P57078 832 aa17.4■□□□□ 0.38
NIPAL3-206ENST00000475663 FMNL2Q96PY5 1086 aa17.4■□□□□ 0.38
NIPAL3-206ENST00000475663 WWC3Q9ULE0 1092 aa17.4■□□□□ 0.38
NIPAL3-206ENST00000475663 SENP3-EIF4A1A0A087X0R7 540 aa17.39■□□□□ 0.37
NIPAL3-206ENST00000475663 ADRA2BP18089 450 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms