RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 ATG3Q9NT62 314 aa17.11■□□□□ 0.33
CCDC57-208ENST00000475635 CLSPNQ9HAW4 1339 aa17.11■□□□□ 0.33
CCDC57-208ENST00000475635 ATP10DQ9P241 1426 aa17.11■□□□□ 0.33
CCDC57-208ENST00000475635 CEP350Q5VT06 3117 aa17.1■□□□□ 0.33
CCDC57-208ENST00000475635 VIRMAQ69YN4 1812 aaKnown RBP17.1■□□□□ 0.33
CCDC57-208ENST00000475635 GNPATO15228 680 aa17.1■□□□□ 0.33
CCDC57-208ENST00000475635 IGSF1Q8N6C5 1336 aa17.1■□□□□ 0.33
CCDC57-208ENST00000475635 PLEKHG2Q9H7P9 1386 aa17.1■□□□□ 0.33
CCDC57-208ENST00000475635 WWC3Q9ULE0 1092 aa17.09■□□□□ 0.33
CCDC57-208ENST00000475635 KIAA1551Q9HCM1 1747 aa17.08■□□□□ 0.32
CCDC57-208ENST00000475635 KDRP35968 1356 aa17.08■□□□□ 0.32
CCDC57-208ENST00000475635 C4AP0C0L4 1744 aa17.07■□□□□ 0.32
CCDC57-208ENST00000475635 PANK3Q9H999 370 aa17.07■□□□□ 0.32
CCDC57-208ENST00000475635 ADCY9O60503 1353 aa17.06■□□□□ 0.32
CCDC57-208ENST00000475635 BRCA1P38398 1863 aaKnown RBP17.06■□□□□ 0.32
CCDC57-208ENST00000475635 HSPA5P11021 654 aaKnown RBP17.06■□□□□ 0.32
CCDC57-208ENST00000475635 EIF4G2P78344 907 aaKnown RBP eCLIP17.06■□□□□ 0.32
CCDC57-208ENST00000475635 SCN11AQ9UI33 1791 aa17.06■□□□□ 0.32
CCDC57-208ENST00000475635 ERVV-2B6SEH9 535 aa17.05■□□□□ 0.32
CCDC57-208ENST00000475635 HSP90AB1P08238 724 aaKnown RBP17.05■□□□□ 0.32
CCDC57-208ENST00000475635 MMP10P09238 476 aa17.05■□□□□ 0.32
CCDC57-208ENST00000475635 CICQ96RK0 1608 aaPredicted RBP17.05■□□□□ 0.32
CCDC57-208ENST00000475635 PLEKHO1Q53GL0 409 aaPredicted RBP17.04■□□□□ 0.32
CCDC57-208ENST00000475635 DCAF5Q96JK2 942 aa17.04■□□□□ 0.32
CCDC57-208ENST00000475635 SLC4A9Q96Q91 983 aa17.04■□□□□ 0.32
CCDC57-208ENST00000475635 RBM42Q9BTD8 480 aaKnown RBP17.04■□□□□ 0.32
CCDC57-208ENST00000475635 GPBP1L1Q9HC44 474 aaPredicted RBP17.04■□□□□ 0.32
CCDC57-208ENST00000475635 RTCBQ9Y3I0 505 aaKnown RBP17.04■□□□□ 0.32
CCDC57-208ENST00000475635 KDM6AO15550 1401 aaPredicted RBP17.04■□□□□ 0.32
CCDC57-208ENST00000475635 TRAPPC3LQ5T215 181 aa17.03■□□□□ 0.32
CCDC57-208ENST00000475635 ZNF530Q6P9A1 599 aaPredicted RBP17.03■□□□□ 0.32
CCDC57-208ENST00000475635 AMOTQ4VCS5 1084 aa17.02■□□□□ 0.32
CCDC57-208ENST00000475635 ZNF526Q8TF50 670 aaPredicted RBP17.02■□□□□ 0.32
CCDC57-208ENST00000475635 TJP1Q07157 1748 aa17.01■□□□□ 0.31
CCDC57-208ENST00000475635 PXDNLA1KZ92 1463 aa17.01■□□□□ 0.31
CCDC57-208ENST00000475635 CABP4P57796 275 aa17.01■□□□□ 0.31
CCDC57-208ENST00000475635 MORC1Q86VD1 984 aa17.01■□□□□ 0.31
CCDC57-208ENST00000475635 AEBP1Q8IUX7 1158 aa17.01■□□□□ 0.31
CCDC57-208ENST00000475635 ARFGEF1Q9Y6D6 1849 aa17■□□□□ 0.31
CCDC57-208ENST00000475635 CNTNAP4Q9C0A0 1308 aa17■□□□□ 0.31
CCDC57-208ENST00000475635 ADRA2BP18089 450 aa17■□□□□ 0.31
CCDC57-208ENST00000475635 RC3H1Q5TC82 1133 aaKnown RBP17■□□□□ 0.31
CCDC57-208ENST00000475635 NLGN1Q8N2Q7 840 aa17■□□□□ 0.31
CCDC57-208ENST00000475635 ARHGEF1Q92888 912 aaKnown RBP17■□□□□ 0.31
CCDC57-208ENST00000475635 MTHFSP49914 203 aa16.99■□□□□ 0.31
CCDC57-208ENST00000475635 C1orf141Q5JVX7 400 aa16.99■□□□□ 0.31
CCDC57-208ENST00000475635 C10orf71Q711Q0 1435 aa16.98■□□□□ 0.31
CCDC57-208ENST00000475635 RPS6KA4O75676 772 aa16.98■□□□□ 0.31
CCDC57-208ENST00000475635 RFC4P35249 363 aa16.98■□□□□ 0.31
CCDC57-208ENST00000475635 GYS1P13807 737 aa16.97■□□□□ 0.31
CCDC57-208ENST00000475635 TGFB2P61812 414 aa16.97■□□□□ 0.31
CCDC57-208ENST00000475635 SULT6B1Q6IMI4 303 aa16.97■□□□□ 0.31
CCDC57-208ENST00000475635 A0A0G2JLW4 131 aa16.96■□□□□ 0.31
CCDC57-208ENST00000475635 PTCD1O75127 700 aaKnown RBP16.96■□□□□ 0.31
CCDC57-208ENST00000475635 NFATC2IPQ8NCF5 419 aa16.96■□□□□ 0.31
CCDC57-208ENST00000475635 KNSTRNQ9Y448 316 aa16.96■□□□□ 0.31
CCDC57-208ENST00000475635 ADAMTS7Q9UKP4 1686 aa16.95■□□□□ 0.3
CCDC57-208ENST00000475635 CCDC87Q9NVE4 849 aa16.95■□□□□ 0.3
CCDC57-208ENST00000475635 BCS1LQ9Y276 419 aa16.95■□□□□ 0.3
CCDC57-208ENST00000475635 IL13P35225 146 aa16.94■□□□□ 0.3
CCDC57-208ENST00000475635 CRKLP46109 303 aaKnown RBP16.94■□□□□ 0.3
CCDC57-208ENST00000475635 PARP3Q9Y6F1 533 aa16.94■□□□□ 0.3
CCDC57-208ENST00000475635 SBF1O95248 1867 aa16.94■□□□□ 0.3
CCDC57-208ENST00000475635 AFDNP55196 1824 aaKnown RBP16.93■□□□□ 0.3
CCDC57-208ENST00000475635 DPEP1P16444 411 aa16.93■□□□□ 0.3
CCDC57-208ENST00000475635 KIF3CO14782 793 aa16.92■□□□□ 0.3
CCDC57-208ENST00000475635 HSPA6P17066 643 aa16.92■□□□□ 0.3
CCDC57-208ENST00000475635 CCER1Q8TC90 406 aaPredicted RBP16.92■□□□□ 0.3
CCDC57-208ENST00000475635 AMER1Q5JTC6 1135 aaPredicted RBP16.91■□□□□ 0.3
CCDC57-208ENST00000475635 ARHGAP27Q6ZUM4 889 aa16.91■□□□□ 0.3
CCDC57-208ENST00000475635 SRP68Q9UHB9 627 aaKnown RBP16.91■□□□□ 0.3
CCDC57-208ENST00000475635 USP42Q9H9J4 1324 aaKnown RBP16.91■□□□□ 0.3
CCDC57-208ENST00000475635 FCHSD2O94868 740 aa16.9■□□□□ 0.3
CCDC57-208ENST00000475635 FKBP8Q14318 412 aa16.9■□□□□ 0.3
CCDC57-208ENST00000475635 AKAP4Q5JQC9 854 aa16.9■□□□□ 0.3
CCDC57-208ENST00000475635 MRC1P22897 1456 aa16.9■□□□□ 0.3
CCDC57-208ENST00000475635 CCDC88AQ3V6T2 1871 aa16.89■□□□□ 0.29
CCDC57-208ENST00000475635 SLC52A2Q9HAB3 445 aa16.89■□□□□ 0.29
CCDC57-208ENST00000475635 UBR2Q8IWV8 1755 aa16.89■□□□□ 0.29
CCDC57-208ENST00000475635 KCNA3P22001 575 aa16.88■□□□□ 0.29
CCDC57-208ENST00000475635 DDR1Q08345 913 aa16.88■□□□□ 0.29
CCDC57-208ENST00000475635 INTS5Q6P9B9 1019 aaKnown RBP16.88■□□□□ 0.29
CCDC57-208ENST00000475635 LGR6Q9HBX8 967 aa16.88■□□□□ 0.29
CCDC57-208ENST00000475635 DLEC1Q9Y238 1755 aa16.87■□□□□ 0.29
CCDC57-208ENST00000475635 HMOX1P09601 288 aa16.87■□□□□ 0.29
CCDC57-208ENST00000475635 DNAJC10Q8IXB1 793 aa16.87■□□□□ 0.29
CCDC57-208ENST00000475635 PIM2Q9P1W9 311 aa16.87■□□□□ 0.29
CCDC57-208ENST00000475635 KIF7Q2M1P5 1343 aa16.87■□□□□ 0.29
CCDC57-208ENST00000475635 KCPQ6ZWJ8 1503 aa16.86■□□□□ 0.29
CCDC57-208ENST00000475635 NRXN2Q9P2S2 1712 aa16.85■□□□□ 0.29
CCDC57-208ENST00000475635 RNMTO43148 476 aaKnown RBP16.85■□□□□ 0.29
CCDC57-208ENST00000475635 ZPR1O75312 459 aa16.85■□□□□ 0.29
CCDC57-208ENST00000475635 SLC39A6Q13433 755 aa16.85■□□□□ 0.29
CCDC57-208ENST00000475635 USPL1Q5W0Q7 1092 aa16.85■□□□□ 0.29
CCDC57-208ENST00000475635 POLRMTO00411 1230 aaKnown RBP16.84■□□□□ 0.29
CCDC57-208ENST00000475635 DALRD3Q5D0E6 543 aaKnown RBP16.84■□□□□ 0.29
CCDC57-208ENST00000475635 SOS1Q07889 1333 aaPredicted RBP16.84■□□□□ 0.29
CCDC57-208ENST00000475635 SIPA1L3O60292 1781 aaPredicted RBP16.84■□□□□ 0.29
CCDC57-208ENST00000475635 TOMM70O94826 608 aa16.83■□□□□ 0.28
CCDC57-208ENST00000475635 CYP19A1P11511 503 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms