RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-222ENST00000475580 ZNF831Q5JPB2 1677 aa22.21■■□□□ 1.15
VPS8-222ENST00000475580 ITPK1Q13572 414 aa22.21■■□□□ 1.15
VPS8-222ENST00000475580 NFATC2IPQ8NCF5 419 aa22.21■■□□□ 1.15
VPS8-222ENST00000475580 SLC4A9Q96Q91 983 aa22.21■■□□□ 1.15
VPS8-222ENST00000475580 SGIP1Q9BQI5 828 aa22.21■■□□□ 1.15
VPS8-222ENST00000475580 NUDCQ9Y266 331 aa22.21■■□□□ 1.15
VPS8-222ENST00000475580 ATF5Q9Y2D1 282 aaPredicted RBP22.21■■□□□ 1.15
VPS8-222ENST00000475580 COL24A1Q17RW2 1714 aa22.2■■□□□ 1.14
VPS8-222ENST00000475580 RNMTO43148 476 aaKnown RBP22.2■■□□□ 1.14
VPS8-222ENST00000475580 PRKAR2BP31323 418 aa22.19■■□□□ 1.14
VPS8-222ENST00000475580 LINC00116Q8NCU8 138 aa22.19■■□□□ 1.14
VPS8-222ENST00000475580 PHACTR3Q96KR7 559 aa22.19■■□□□ 1.14
VPS8-222ENST00000475580 UBR3Q6ZT12 1888 aa22.19■■□□□ 1.14
VPS8-222ENST00000475580 U2AF1L5P0DN76 240 aaPredicted RBP22.18■■□□□ 1.14
VPS8-222ENST00000475580 U2AF1Q01081 240 aaKnown RBP eCLIP22.18■■□□□ 1.14
VPS8-222ENST00000475580 RALBP1Q15311 655 aa22.18■■□□□ 1.14
VPS8-222ENST00000475580 AMIGO3Q86WK7 504 aa22.18■■□□□ 1.14
VPS8-222ENST00000475580 SLC52A2Q9HAB3 445 aa22.18■■□□□ 1.14
VPS8-222ENST00000475580 ATP6V1AP38606 617 aa22.17■■□□□ 1.14
VPS8-222ENST00000475580 COL23A1Q86Y22 540 aaPredicted RBP22.17■■□□□ 1.14
VPS8-222ENST00000475580 COL5A3P25940 1745 aaPredicted RBP22.17■■□□□ 1.14
VPS8-222ENST00000475580 MAP3K5Q99683 1374 aa22.16■■□□□ 1.14
VPS8-222ENST00000475580 GAS2L2Q8NHY3 880 aa22.16■■□□□ 1.14
VPS8-222ENST00000475580 SLC16A10Q8TF71 515 aa22.16■■□□□ 1.14
VPS8-222ENST00000475580 HMGB2P26583 209 aaKnown RBP22.15■■□□□ 1.14
VPS8-222ENST00000475580 CICQ96RK0 1608 aaPredicted RBP22.14■■□□□ 1.14
VPS8-222ENST00000475580 FCHSD2O94868 740 aa22.14■■□□□ 1.13
VPS8-222ENST00000475580 RBM42Q9BTD8 480 aaKnown RBP22.14■■□□□ 1.13
VPS8-222ENST00000475580 PPP1R1BQ9UD71 204 aaPredicted RBP22.14■■□□□ 1.13
VPS8-222ENST00000475580 SIPA1L3O60292 1781 aaPredicted RBP22.13■■□□□ 1.13
VPS8-222ENST00000475580 SMIM5Q71RC9 77 aa22.13■■□□□ 1.13
VPS8-222ENST00000475580 IL17REQ8NFR9 667 aa22.13■■□□□ 1.13
VPS8-222ENST00000475580 AK7Q96M32 723 aa22.13■■□□□ 1.13
VPS8-222ENST00000475580 TJP1Q07157 1748 aa22.13■■□□□ 1.13
VPS8-222ENST00000475580 GNAT3A8MTJ3 354 aa22.12■■□□□ 1.13
VPS8-222ENST00000475580 KCPQ6ZWJ8 1503 aa22.11■■□□□ 1.13
VPS8-222ENST00000475580 PTCD1O75127 700 aaKnown RBP22.11■■□□□ 1.13
VPS8-222ENST00000475580 FLAD1Q8NFF5 587 aa22.1■■□□□ 1.13
VPS8-222ENST00000475580 MYH14Q7Z406 1995 aaKnown RBP22.1■■□□□ 1.13
VPS8-222ENST00000475580 CEMIPQ8WUJ3 1361 aa22.1■■□□□ 1.13
VPS8-222ENST00000475580 UBR2Q8IWV8 1755 aa22.1■■□□□ 1.13
VPS8-222ENST00000475580 MYBBP1AQ9BQG0 1328 aaKnown RBP22.09■■□□□ 1.13
VPS8-222ENST00000475580 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.09■■□□□ 1.13
VPS8-222ENST00000475580 SLC39A6Q13433 755 aa22.09■■□□□ 1.13
VPS8-222ENST00000475580 GNPATO15228 680 aa22.08■■□□□ 1.13
VPS8-222ENST00000475580 MSH5O43196 834 aa22.08■■□□□ 1.13
VPS8-222ENST00000475580 PHF14O94880 888 aa22.08■■□□□ 1.13
VPS8-222ENST00000475580 SSFA2P28290 1259 aa22.08■■□□□ 1.13
VPS8-222ENST00000475580 CNTNAP4Q9C0A0 1308 aa22.07■■□□□ 1.12
VPS8-222ENST00000475580 RC3H1Q5TC82 1133 aaKnown RBP22.07■■□□□ 1.12
VPS8-222ENST00000475580 ARXQ96QS3 562 aa22.07■■□□□ 1.12
VPS8-222ENST00000475580 PLEKHF1Q96S99 279 aa22.07■■□□□ 1.12
VPS8-222ENST00000475580 MSL1Q68DK7 614 aa22.06■■□□□ 1.12
VPS8-222ENST00000475580 FHDC1Q9C0D6 1143 aaPredicted RBP22.05■■□□□ 1.12
VPS8-222ENST00000475580 PRKRIP1Q9H875 184 aaPredicted RBP22.05■■□□□ 1.12
VPS8-222ENST00000475580 DLG5Q8TDM6 1919 aa22.04■■□□□ 1.12
VPS8-222ENST00000475580 POLD1P28340 1107 aa22.03■■□□□ 1.12
VPS8-222ENST00000475580 TEFQ10587 303 aa22.03■■□□□ 1.12
VPS8-222ENST00000475580 DNAJC10Q8IXB1 793 aa22.03■■□□□ 1.12
VPS8-222ENST00000475580 CRKLP46109 303 aaKnown RBP22.02■■□□□ 1.12
VPS8-222ENST00000475580 SYT17Q9BSW7 474 aa22.02■■□□□ 1.12
VPS8-222ENST00000475580 RTCBQ9Y3I0 505 aaKnown RBP22.02■■□□□ 1.12
VPS8-222ENST00000475580 C4AP0C0L4 1744 aa22.01■■□□□ 1.11
VPS8-222ENST00000475580 ZNF316A6NFI3 1004 aaPredicted RBP22.01■■□□□ 1.11
VPS8-222ENST00000475580 RPS6KA4O75676 772 aa22.01■■□□□ 1.11
VPS8-222ENST00000475580 MCM10Q7L590 875 aa22.01■■□□□ 1.11
VPS8-222ENST00000475580 HTATSF1O43719 755 aaKnown RBP22■■□□□ 1.11
VPS8-222ENST00000475580 DCTN1Q14203 1278 aa22■■□□□ 1.11
VPS8-222ENST00000475580 INTS5Q6P9B9 1019 aaKnown RBP22■■□□□ 1.11
VPS8-222ENST00000475580 CYP19A1P11511 503 aaPredicted RBP21.99■■□□□ 1.11
VPS8-222ENST00000475580 ZNF790Q6PG37 636 aa21.99■■□□□ 1.11
VPS8-222ENST00000475580 VSIG10Q8N0Z9 540 aa21.99■■□□□ 1.11
VPS8-222ENST00000475580 KCNQ3O43525 872 aa21.98■■□□□ 1.11
VPS8-222ENST00000475580 ADRA2BP18089 450 aa21.98■■□□□ 1.11
VPS8-222ENST00000475580 TRAPPC3LQ5T215 181 aa21.98■■□□□ 1.11
VPS8-222ENST00000475580 TTC5Q8N0Z6 440 aa21.98■■□□□ 1.11
VPS8-222ENST00000475580 RTF1Q92541 710 aaKnown RBP21.98■■□□□ 1.11
VPS8-222ENST00000475580 ARHGEF1Q92888 912 aaKnown RBP21.98■■□□□ 1.11
VPS8-222ENST00000475580 ZNF496Q96IT1 587 aaPredicted RBP21.98■■□□□ 1.11
VPS8-222ENST00000475580 NFE2L2Q16236 605 aa21.97■■□□□ 1.11
VPS8-222ENST00000475580 BTBD11A6QL63 1104 aa21.96■■□□□ 1.11
VPS8-222ENST00000475580 CCDC87Q9NVE4 849 aa21.96■■□□□ 1.11
VPS8-222ENST00000475580 HEG1Q9ULI3 1381 aa21.96■■□□□ 1.11
VPS8-222ENST00000475580 NEFMP07197 916 aa21.95■■□□□ 1.1
VPS8-222ENST00000475580 PNNQ9H307 717 aaKnown RBP21.95■■□□□ 1.1
VPS8-222ENST00000475580 SOS1Q07889 1333 aaPredicted RBP21.94■■□□□ 1.1
VPS8-222ENST00000475580 MAPK8IP3Q9UPT6 1336 aa21.94■■□□□ 1.1
VPS8-222ENST00000475580 ZBTB1Q9Y2K1 713 aa21.93■■□□□ 1.1
VPS8-222ENST00000475580 GYS1P13807 737 aa21.92■■□□□ 1.1
VPS8-222ENST00000475580 KLHL34Q8N239 644 aa21.92■■□□□ 1.1
VPS8-222ENST00000475580 FMNL2Q96PY5 1086 aa21.92■■□□□ 1.1
VPS8-222ENST00000475580 RFC4P35249 363 aa21.91■■□□□ 1.1
VPS8-222ENST00000475580 NLGN2Q8NFZ4 835 aa21.91■■□□□ 1.1
VPS8-222ENST00000475580 SRP68Q9UHB9 627 aaKnown RBP21.91■■□□□ 1.1
VPS8-222ENST00000475580 KDM3BQ7LBC6 1761 aa21.9■■□□□ 1.1
VPS8-222ENST00000475580 USP42Q9H9J4 1324 aaKnown RBP21.9■■□□□ 1.1
VPS8-222ENST00000475580 TAF7Q15545 349 aaPredicted RBP21.9■■□□□ 1.1
VPS8-222ENST00000475580 THUMPD2Q9BTF0 503 aaKnown RBP21.9■■□□□ 1.1
VPS8-222ENST00000475580 MMP10P09238 476 aa21.89■■□□□ 1.09
VPS8-222ENST00000475580 CCDC146Q8IYE0 955 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms