RNA–Protein interactions for RNA: ENST00000475501.1

LRP8-208, Transcript of LDL receptor related protein 8, humanhuman

TSL 3

Gene LRP8, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-208ENST00000475501 ATP6V1AP38606 617 aa12.25□□□□□ -0.45
LRP8-208ENST00000475501 TNNT2P45379 298 aaPredicted RBP12.25□□□□□ -0.45
LRP8-208ENST00000475501 ATG3Q9NT62 314 aa12.25□□□□□ -0.45
LRP8-208ENST00000475501 ASAP1Q9ULH1 1129 aa12.25□□□□□ -0.45
LRP8-208ENST00000475501 VIRMAQ69YN4 1812 aaKnown RBP12.25□□□□□ -0.45
LRP8-208ENST00000475501 KLHL34Q8N239 644 aa12.24□□□□□ -0.45
LRP8-208ENST00000475501 NPC1L1Q9UHC9 1359 aa12.23□□□□□ -0.45
LRP8-208ENST00000475501 CNTNAP4Q9C0A0 1308 aa12.23□□□□□ -0.45
LRP8-208ENST00000475501 AMER1Q5JTC6 1135 aaPredicted RBP12.23□□□□□ -0.45
LRP8-208ENST00000475501 C1orf141Q5JVX7 400 aa12.23□□□□□ -0.45
LRP8-208ENST00000475501 LINC00116Q8NCU8 138 aa12.23□□□□□ -0.45
LRP8-208ENST00000475501 NLGN2Q8NFZ4 835 aa12.23□□□□□ -0.45
LRP8-208ENST00000475501 MYH14Q7Z406 1995 aaKnown RBP12.23□□□□□ -0.45
LRP8-208ENST00000475501 GOLGB1Q14789 3259 aaKnown RBP12.22□□□□□ -0.45
LRP8-208ENST00000475501 IL13P35225 146 aa12.22□□□□□ -0.45
LRP8-208ENST00000475501 ITPK1Q13572 414 aa12.22□□□□□ -0.45
LRP8-208ENST00000475501 ZNF530Q6P9A1 599 aaPredicted RBP12.22□□□□□ -0.45
LRP8-208ENST00000475501 NLGN1Q8N2Q7 840 aa12.22□□□□□ -0.45
LRP8-208ENST00000475501 RTCBQ9Y3I0 505 aaKnown RBP12.22□□□□□ -0.45
LRP8-208ENST00000475501 KDM6AO15550 1401 aaPredicted RBP12.21□□□□□ -0.45
LRP8-208ENST00000475501 GNPATO15228 680 aa12.21□□□□□ -0.45
LRP8-208ENST00000475501 MTHFSP49914 203 aa12.21□□□□□ -0.45
LRP8-208ENST00000475501 CABP4P57796 275 aa12.21□□□□□ -0.45
LRP8-208ENST00000475501 TRAPPC3LQ5T215 181 aa12.21□□□□□ -0.45
LRP8-208ENST00000475501 MSL1Q68DK7 614 aa12.21□□□□□ -0.45
LRP8-208ENST00000475501 KIF7Q2M1P5 1343 aa12.2□□□□□ -0.46
LRP8-208ENST00000475501 PER1O15534 1290 aaPredicted RBP12.2□□□□□ -0.46
LRP8-208ENST00000475501 RPS6KA4O75676 772 aa12.2□□□□□ -0.46
LRP8-208ENST00000475501 YBX3P16989 372 aaKnown RBP eCLIP12.2□□□□□ -0.46
LRP8-208ENST00000475501 AKAP4Q5JQC9 854 aa12.2□□□□□ -0.46
LRP8-208ENST00000475501 SULT6B1Q6IMI4 303 aa12.2□□□□□ -0.46
LRP8-208ENST00000475501 ADAMTS7Q9UKP4 1686 aa12.19□□□□□ -0.46
LRP8-208ENST00000475501 PHF14O94880 888 aa12.19□□□□□ -0.46
LRP8-208ENST00000475501 TGFB2P61812 414 aa12.19□□□□□ -0.46
LRP8-208ENST00000475501 AMIGO3Q86WK7 504 aa12.19□□□□□ -0.46
LRP8-208ENST00000475501 PELP1Q8IZL8 1130 aaKnown RBP12.19□□□□□ -0.46
LRP8-208ENST00000475501 C4AP0C0L4 1744 aa12.19□□□□□ -0.46
LRP8-208ENST00000475501 C1QTNF8P60827 252 aa12.18□□□□□ -0.46
LRP8-208ENST00000475501 MRC1P22897 1456 aa12.18□□□□□ -0.46
LRP8-208ENST00000475501 BRCA1P38398 1863 aaKnown RBP12.17□□□□□ -0.46
LRP8-208ENST00000475501 AEBP1Q8IUX7 1158 aa12.17□□□□□ -0.46
LRP8-208ENST00000475501 NFATC2IPQ8NCF5 419 aa12.17□□□□□ -0.46
LRP8-208ENST00000475501 SLC4A9Q96Q91 983 aa12.17□□□□□ -0.46
LRP8-208ENST00000475501 RBM42Q9BTD8 480 aaKnown RBP12.17□□□□□ -0.46
LRP8-208ENST00000475501 TJP1Q07157 1748 aa12.17□□□□□ -0.46
LRP8-208ENST00000475501 KIAA1551Q9HCM1 1747 aa12.17□□□□□ -0.46
LRP8-208ENST00000475501 ARFGEF1Q9Y6D6 1849 aa12.16□□□□□ -0.46
LRP8-208ENST00000475501 GIGYF1O75420 1035 aaPredicted RBP12.16□□□□□ -0.46
LRP8-208ENST00000475501 RFC4P35249 363 aa12.16□□□□□ -0.46
LRP8-208ENST00000475501 ARHGEF1Q92888 912 aaKnown RBP12.16□□□□□ -0.46
LRP8-208ENST00000475501 SLC52A2Q9HAB3 445 aa12.16□□□□□ -0.46
LRP8-208ENST00000475501 ADCY9O60503 1353 aa12.16□□□□□ -0.46
LRP8-208ENST00000475501 C10orf71Q711Q0 1435 aa12.15□□□□□ -0.46
LRP8-208ENST00000475501 DIAPH1O60610 1272 aaKnown RBP12.15□□□□□ -0.46
LRP8-208ENST00000475501 MMP10P09238 476 aa12.15□□□□□ -0.46
LRP8-208ENST00000475501 GYS1P13807 737 aa12.15□□□□□ -0.46
LRP8-208ENST00000475501 VSIG10Q8N0Z9 540 aa12.15□□□□□ -0.46
LRP8-208ENST00000475501 CCDC87Q9NVE4 849 aa12.15□□□□□ -0.46
LRP8-208ENST00000475501 UBR2Q8IWV8 1755 aa12.15□□□□□ -0.46
LRP8-208ENST00000475501 N4BP2Q86UW6 1770 aaPredicted RBP12.13□□□□□ -0.47
LRP8-208ENST00000475501 RNMTO43148 476 aaKnown RBP12.13□□□□□ -0.47
LRP8-208ENST00000475501 CRKLP46109 303 aaKnown RBP12.13□□□□□ -0.47
LRP8-208ENST00000475501 PARP3Q9Y6F1 533 aa12.13□□□□□ -0.47
LRP8-208ENST00000475501 PXDNLA1KZ92 1463 aa12.13□□□□□ -0.47
LRP8-208ENST00000475501 PTCD1O75127 700 aaKnown RBP12.12□□□□□ -0.47
LRP8-208ENST00000475501 USP42Q9H9J4 1324 aaKnown RBP12.11□□□□□ -0.47
LRP8-208ENST00000475501 ATP10DQ9P241 1426 aa12.11□□□□□ -0.47
LRP8-208ENST00000475501 SIPA1L3O60292 1781 aaPredicted RBP12.11□□□□□ -0.47
LRP8-208ENST00000475501 COL3A1P02461 1466 aaPredicted RBP12.11□□□□□ -0.47
LRP8-208ENST00000475501 GAS2L2Q8NHY3 880 aa12.11□□□□□ -0.47
LRP8-208ENST00000475501 MTHFSDQ2M296 383 aaKnown RBP12.1□□□□□ -0.47
LRP8-208ENST00000475501 INTS5Q6P9B9 1019 aaKnown RBP12.1□□□□□ -0.47
LRP8-208ENST00000475501 SMIM5Q71RC9 77 aa12.1□□□□□ -0.47
LRP8-208ENST00000475501 TEX13AQ9BXU3 409 aaPredicted RBP12.1□□□□□ -0.47
LRP8-208ENST00000475501 GPBP1L1Q9HC44 474 aaPredicted RBP12.1□□□□□ -0.47
LRP8-208ENST00000475501 NRXN2Q9P2S2 1712 aa12.1□□□□□ -0.47
LRP8-208ENST00000475501 KCPQ6ZWJ8 1503 aa12.1□□□□□ -0.47
LRP8-208ENST00000475501 ZPR1O75312 459 aa12.09□□□□□ -0.47
LRP8-208ENST00000475501 HMOX1P09601 288 aa12.09□□□□□ -0.47
LRP8-208ENST00000475501 CC2D1BQ5T0F9 858 aaKnown RBP12.09□□□□□ -0.47
LRP8-208ENST00000475501 LGR6Q9HBX8 967 aa12.09□□□□□ -0.47
LRP8-208ENST00000475501 SOS1Q07889 1333 aaPredicted RBP12.09□□□□□ -0.47
LRP8-208ENST00000475501 SENP3-EIF4A1A0A087X0R7 540 aa12.08□□□□□ -0.48
LRP8-208ENST00000475501 GNAT3A8MTJ3 354 aa12.08□□□□□ -0.48
LRP8-208ENST00000475501 CYP19A1P11511 503 aaPredicted RBP12.08□□□□□ -0.48
LRP8-208ENST00000475501 TM4SF1P30408 202 aa12.08□□□□□ -0.48
LRP8-208ENST00000475501 CFAP53Q96M91 514 aa12.08□□□□□ -0.48
LRP8-208ENST00000475501 PIM2Q9P1W9 311 aa12.08□□□□□ -0.48
LRP8-208ENST00000475501 NARFQ9UHQ1 456 aa12.08□□□□□ -0.48
LRP8-208ENST00000475501 AFDNP55196 1824 aaKnown RBP12.08□□□□□ -0.48
LRP8-208ENST00000475501 DLEC1Q9Y238 1755 aa12.07□□□□□ -0.48
LRP8-208ENST00000475501 A0A087WZG4 1122 aa12.07□□□□□ -0.48
LRP8-208ENST00000475501 SBF1O95248 1867 aa12.07□□□□□ -0.48
LRP8-208ENST00000475501 STARD3NLO95772 234 aa12.07□□□□□ -0.48
LRP8-208ENST00000475501 DNAJC10Q8IXB1 793 aa12.07□□□□□ -0.48
LRP8-208ENST00000475501 TTC5Q8N0Z6 440 aa12.07□□□□□ -0.48
LRP8-208ENST00000475501 NUDCQ9Y266 331 aa12.07□□□□□ -0.48
LRP8-208ENST00000475501 A0A0G2JLW4 131 aa12.06□□□□□ -0.48
LRP8-208ENST00000475501 DPEP1P16444 411 aa12.06□□□□□ -0.48
LRP8-208ENST00000475501 TEFQ10587 303 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms