RNA–Protein interactions for RNA: ENST00000475141.2

FRMD4A-204, Transcript of FERM domain containing 4A, humanhuman

TSL 1 (best) BASIC

Gene FRMD4A, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-204ENST00000475141 KAT6BQ8WYB5 2073 aa18.58■□□□□ 0.57
FRMD4A-204ENST00000475141 FAM9BQ8IZU0 186 aa18.58■□□□□ 0.56
FRMD4A-204ENST00000475141 SPG7Q9UQ90 795 aa18.58■□□□□ 0.56
FRMD4A-204ENST00000475141 BCL9O00512 1426 aa18.57■□□□□ 0.56
FRMD4A-204ENST00000475141 PTGER2P43116 358 aa18.57■□□□□ 0.56
FRMD4A-204ENST00000475141 SLC15A2Q16348 729 aa18.57■□□□□ 0.56
FRMD4A-204ENST00000475141 AMOTQ4VCS5 1084 aa18.57■□□□□ 0.56
FRMD4A-204ENST00000475141 PLEKHO1Q53GL0 409 aaPredicted RBP18.57■□□□□ 0.56
FRMD4A-204ENST00000475141 ZCRB1Q8TBF4 217 aaKnown RBP18.56■□□□□ 0.56
FRMD4A-204ENST00000475141 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.56■□□□□ 0.56
FRMD4A-204ENST00000475141 PCDH11XQ9BZA7 1347 aa18.55■□□□□ 0.56
FRMD4A-204ENST00000475141 PCDH11YQ9BZA8 1340 aa18.55■□□□□ 0.56
FRMD4A-204ENST00000475141 CCDC146Q8IYE0 955 aa18.54■□□□□ 0.56
FRMD4A-204ENST00000475141 GAS2L2Q8NHY3 880 aa18.54■□□□□ 0.56
FRMD4A-204ENST00000475141 RUNDC1Q96C34 613 aa18.54■□□□□ 0.56
FRMD4A-204ENST00000475141 C1orf141Q5JVX7 400 aa18.53■□□□□ 0.56
FRMD4A-204ENST00000475141 ZNF530Q6P9A1 599 aaPredicted RBP18.53■□□□□ 0.56
FRMD4A-204ENST00000475141 SHANK3Q9BYB0 1731 aa18.53■□□□□ 0.56
FRMD4A-204ENST00000475141 FHDC1Q9C0D6 1143 aaPredicted RBP18.53■□□□□ 0.56
FRMD4A-204ENST00000475141 PLEKHF1Q96S99 279 aa18.52■□□□□ 0.56
FRMD4A-204ENST00000475141 NHSQ6T4R5 1651 aa18.51■□□□□ 0.55
FRMD4A-204ENST00000475141 DDX54Q8TDD1 881 aaKnown RBP18.51■□□□□ 0.55
FRMD4A-204ENST00000475141 SYT17Q9BSW7 474 aa18.51■□□□□ 0.55
FRMD4A-204ENST00000475141 IFNL2Q8IZJ0 200 aa18.5■□□□□ 0.55
FRMD4A-204ENST00000475141 PHACTR3Q96KR7 559 aa18.5■□□□□ 0.55
FRMD4A-204ENST00000475141 MTFR1LQ9H019 292 aa18.5■□□□□ 0.55
FRMD4A-204ENST00000475141 MTHFSDQ2M296 383 aaKnown RBP18.49■□□□□ 0.55
FRMD4A-204ENST00000475141 BTAF1O14981 1849 aa18.49■□□□□ 0.55
FRMD4A-204ENST00000475141 HSP90AB1P08238 724 aaKnown RBP18.48■□□□□ 0.55
FRMD4A-204ENST00000475141 AKAP4Q5JQC9 854 aa18.48■□□□□ 0.55
FRMD4A-204ENST00000475141 MAP3K5Q99683 1374 aa18.47■□□□□ 0.55
FRMD4A-204ENST00000475141 CYP27B1O15528 508 aa18.47■□□□□ 0.55
FRMD4A-204ENST00000475141 PHKG2P15735 406 aa18.47■□□□□ 0.55
FRMD4A-204ENST00000475141 NFE2L2Q16236 605 aa18.47■□□□□ 0.55
FRMD4A-204ENST00000475141 SGIP1Q9BQI5 828 aa18.47■□□□□ 0.55
FRMD4A-204ENST00000475141 LRRC4BQ9NT99 713 aa18.47■□□□□ 0.55
FRMD4A-204ENST00000475141 ZNF827Q17R98 1081 aa18.46■□□□□ 0.55
FRMD4A-204ENST00000475141 ARXQ96QS3 562 aa18.46■□□□□ 0.55
FRMD4A-204ENST00000475141 GNAT3A8MTJ3 354 aa18.45■□□□□ 0.54
FRMD4A-204ENST00000475141 APAF1O14727 1248 aa18.45■□□□□ 0.54
FRMD4A-204ENST00000475141 LMOD3Q0VAK6 560 aa18.45■□□□□ 0.54
FRMD4A-204ENST00000475141 ZNF784Q8NCA9 323 aaPredicted RBP18.45■□□□□ 0.54
FRMD4A-204ENST00000475141 RTF1Q92541 710 aaKnown RBP18.45■□□□□ 0.54
FRMD4A-204ENST00000475141 UTRNP46939 3433 aa18.45■□□□□ 0.54
FRMD4A-204ENST00000475141 DLG5Q8TDM6 1919 aa18.45■□□□□ 0.54
FRMD4A-204ENST00000475141 TMPOP42166 694 aaKnown RBP18.44■□□□□ 0.54
FRMD4A-204ENST00000475141 KCNQ4P56696 695 aa18.44■□□□□ 0.54
FRMD4A-204ENST00000475141 PAPPAQ13219 1627 aa18.43■□□□□ 0.54
FRMD4A-204ENST00000475141 RIPK4P57078 832 aa18.43■□□□□ 0.54
FRMD4A-204ENST00000475141 NEUROD2Q15784 382 aa18.43■□□□□ 0.54
FRMD4A-204ENST00000475141 KLHL34Q8N239 644 aa18.43■□□□□ 0.54
FRMD4A-204ENST00000475141 DCAF5Q96JK2 942 aa18.43■□□□□ 0.54
FRMD4A-204ENST00000475141 RRP7AQ9Y3A4 280 aaKnown RBP18.43■□□□□ 0.54
FRMD4A-204ENST00000475141 NKX1-1Q15270 411 aaPredicted RBP18.42■□□□□ 0.54
FRMD4A-204ENST00000475141 SYTL4Q96C24 671 aaPredicted RBP18.42■□□□□ 0.54
FRMD4A-204ENST00000475141 DOT1LQ8TEK3 1739 aa18.42■□□□□ 0.54
FRMD4A-204ENST00000475141 SCN11AQ9UI33 1791 aa18.41■□□□□ 0.54
FRMD4A-204ENST00000475141 HTATSF1O43719 755 aaKnown RBP18.41■□□□□ 0.54
FRMD4A-204ENST00000475141 VIRMAQ69YN4 1812 aaKnown RBP18.41■□□□□ 0.54
FRMD4A-204ENST00000475141 KDM6AO15550 1401 aaPredicted RBP18.4■□□□□ 0.54
FRMD4A-204ENST00000475141 MPRIPQ6WCQ1 1025 aa18.4■□□□□ 0.54
FRMD4A-204ENST00000475141 CHD4Q14839 1912 aa18.4■□□□□ 0.54
FRMD4A-204ENST00000475141 PRIM1P49642 420 aaKnown RBP18.39■□□□□ 0.53
FRMD4A-204ENST00000475141 NGEFQ8N5V2 710 aa18.39■□□□□ 0.53
FRMD4A-204ENST00000475141 TOGARAM1Q9Y4F4 1720 aa18.39■□□□□ 0.53
FRMD4A-204ENST00000475141 ADAMTS7Q9UKP4 1686 aa18.38■□□□□ 0.53
FRMD4A-204ENST00000475141 PITPNM1O00562 1244 aa18.38■□□□□ 0.53
FRMD4A-204ENST00000475141 RNMTO43148 476 aaKnown RBP18.38■□□□□ 0.53
FRMD4A-204ENST00000475141 GPR162Q16538 588 aa18.38■□□□□ 0.53
FRMD4A-204ENST00000475141 ERVV-2B6SEH9 535 aa18.37■□□□□ 0.53
FRMD4A-204ENST00000475141 MCM10Q7L590 875 aa18.37■□□□□ 0.53
FRMD4A-204ENST00000475141 PELP1Q8IZL8 1130 aaKnown RBP18.37■□□□□ 0.53
FRMD4A-204ENST00000475141 TFCP2L1Q9NZI6 479 aa18.37■□□□□ 0.53
FRMD4A-204ENST00000475141 SENP3-EIF4A1A0A087X0R7 540 aa18.36■□□□□ 0.53
FRMD4A-204ENST00000475141 MRC1P22897 1456 aa18.36■□□□□ 0.53
FRMD4A-204ENST00000475141 CABP4P57796 275 aa18.36■□□□□ 0.53
FRMD4A-204ENST00000475141 TEFQ10587 303 aa18.36■□□□□ 0.53
FRMD4A-204ENST00000475141 SLC27A3Q5K4L6 730 aa18.36■□□□□ 0.53
FRMD4A-204ENST00000475141 TMOD3Q9NYL9 352 aa18.36■□□□□ 0.53
FRMD4A-204ENST00000475141 CEMIPQ8WUJ3 1361 aa18.35■□□□□ 0.53
FRMD4A-204ENST00000475141 PNPLA7Q6ZV29 1317 aa18.35■□□□□ 0.53
FRMD4A-204ENST00000475141 CALD1Q05682 793 aaKnown RBP18.35■□□□□ 0.53
FRMD4A-204ENST00000475141 DCTN1Q14203 1278 aa18.35■□□□□ 0.53
FRMD4A-204ENST00000475141 CCDC27Q2M243 656 aa18.35■□□□□ 0.53
FRMD4A-204ENST00000475141 LGR6Q9HBX8 967 aa18.35■□□□□ 0.53
FRMD4A-204ENST00000475141 SALL2Q9Y467 1007 aaPredicted RBP18.35■□□□□ 0.53
FRMD4A-204ENST00000475141 ITGB4P16144 1822 aa18.35■□□□□ 0.53
FRMD4A-204ENST00000475141 POLD1P28340 1107 aa18.34■□□□□ 0.53
FRMD4A-204ENST00000475141 HNRNPUQ00839 825 aaKnown RBP eCLIP18.34■□□□□ 0.53
FRMD4A-204ENST00000475141 IL17REQ8NFR9 667 aa18.34■□□□□ 0.53
FRMD4A-204ENST00000475141 SLC52A2Q9HAB3 445 aa18.34■□□□□ 0.53
FRMD4A-204ENST00000475141 TRIM35Q9UPQ4 493 aa18.34■□□□□ 0.53
FRMD4A-204ENST00000475141 SSUH2Q9Y2M2 353 aa18.34■□□□□ 0.53
FRMD4A-204ENST00000475141 TUBGCP6Q96RT7 1819 aa18.34■□□□□ 0.53
FRMD4A-204ENST00000475141 SLC16A10Q8TF71 515 aa18.33■□□□□ 0.52
FRMD4A-204ENST00000475141 THUMPD2Q9BTF0 503 aaKnown RBP18.32■□□□□ 0.52
FRMD4A-204ENST00000475141 QSER1Q2KHR3 1735 aa18.32■□□□□ 0.52
FRMD4A-204ENST00000475141 WWC1Q8IX03 1113 aa18.31■□□□□ 0.52
FRMD4A-204ENST00000475141 NFATC2IPQ8NCF5 419 aa18.31■□□□□ 0.52
FRMD4A-204ENST00000475141 NLGN2Q8NFZ4 835 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms