RNA–Protein interactions for RNA: ENST00000474887.5

DNMT3A-211, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-211ENST00000474887 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.96■□□□□ 0.63
DNMT3A-211ENST00000474887 AKAP4Q5JQC9 854 aa18.96■□□□□ 0.63
DNMT3A-211ENST00000474887 CC2D1BQ5T0F9 858 aaKnown RBP18.96■□□□□ 0.63
DNMT3A-211ENST00000474887 ADRA2BP18089 450 aa18.95■□□□□ 0.62
DNMT3A-211ENST00000474887 LINC00116Q8NCU8 138 aa18.95■□□□□ 0.62
DNMT3A-211ENST00000474887 C4BP0C0L5 1744 aa18.94■□□□□ 0.62
DNMT3A-211ENST00000474887 ITPK1Q13572 414 aa18.94■□□□□ 0.62
DNMT3A-211ENST00000474887 GPR162Q16538 588 aa18.94■□□□□ 0.62
DNMT3A-211ENST00000474887 TAF1LQ8IZX4 1826 aa18.94■□□□□ 0.62
DNMT3A-211ENST00000474887 GRIN3BO60391 1043 aa18.93■□□□□ 0.62
DNMT3A-211ENST00000474887 RTCBQ9Y3I0 505 aaKnown RBP18.93■□□□□ 0.62
DNMT3A-211ENST00000474887 TUBGCP6Q96RT7 1819 aa18.93■□□□□ 0.62
DNMT3A-211ENST00000474887 KDM6AO15550 1401 aaPredicted RBP18.92■□□□□ 0.62
DNMT3A-211ENST00000474887 GNPATO15228 680 aa18.92■□□□□ 0.62
DNMT3A-211ENST00000474887 TRAPPC3LQ5T215 181 aa18.92■□□□□ 0.62
DNMT3A-211ENST00000474887 KLHL34Q8N239 644 aa18.92■□□□□ 0.62
DNMT3A-211ENST00000474887 NFATC2IPQ8NCF5 419 aa18.92■□□□□ 0.62
DNMT3A-211ENST00000474887 RBM42Q9BTD8 480 aaKnown RBP18.92■□□□□ 0.62
DNMT3A-211ENST00000474887 CNTNAP4Q9C0A0 1308 aa18.92■□□□□ 0.62
DNMT3A-211ENST00000474887 ZNF831Q5JPB2 1677 aa18.92■□□□□ 0.62
DNMT3A-211ENST00000474887 NLGN1Q8N2Q7 840 aa18.91■□□□□ 0.62
DNMT3A-211ENST00000474887 RPS6KA4O75676 772 aa18.9■□□□□ 0.62
DNMT3A-211ENST00000474887 CFAP53Q96M91 514 aa18.9■□□□□ 0.62
DNMT3A-211ENST00000474887 PHF14O94880 888 aa18.89■□□□□ 0.61
DNMT3A-211ENST00000474887 MSL1Q68DK7 614 aa18.89■□□□□ 0.61
DNMT3A-211ENST00000474887 HMOX1P09601 288 aa18.88■□□□□ 0.61
DNMT3A-211ENST00000474887 SLC4A9Q96Q91 983 aa18.88■□□□□ 0.61
DNMT3A-211ENST00000474887 SLC52A2Q9HAB3 445 aa18.88■□□□□ 0.61
DNMT3A-211ENST00000474887 AMIGO3Q86WK7 504 aa18.87■□□□□ 0.61
DNMT3A-211ENST00000474887 UBR3Q6ZT12 1888 aa18.86■□□□□ 0.61
DNMT3A-211ENST00000474887 RNMTO43148 476 aaKnown RBP18.86■□□□□ 0.61
DNMT3A-211ENST00000474887 MTHFSDQ2M296 383 aaKnown RBP18.86■□□□□ 0.61
DNMT3A-211ENST00000474887 NLGN2Q8NFZ4 835 aa18.86■□□□□ 0.61
DNMT3A-211ENST00000474887 GAS2L2Q8NHY3 880 aa18.86■□□□□ 0.61
DNMT3A-211ENST00000474887 NUDCQ9Y266 331 aa18.86■□□□□ 0.61
DNMT3A-211ENST00000474887 PTCD1O75127 700 aaKnown RBP18.85■□□□□ 0.61
DNMT3A-211ENST00000474887 RFC4P35249 363 aa18.85■□□□□ 0.61
DNMT3A-211ENST00000474887 VSIG10Q8N0Z9 540 aa18.84■□□□□ 0.61
DNMT3A-211ENST00000474887 ARHGEF1Q92888 912 aaKnown RBP18.84■□□□□ 0.61
DNMT3A-211ENST00000474887 U2SURPO15042 1029 aaKnown RBP18.83■□□□□ 0.6
DNMT3A-211ENST00000474887 LGR6Q9HBX8 967 aa18.83■□□□□ 0.6
DNMT3A-211ENST00000474887 CRKLP46109 303 aaKnown RBP18.82■□□□□ 0.6
DNMT3A-211ENST00000474887 PELP1Q8IZL8 1130 aaKnown RBP18.82■□□□□ 0.6
DNMT3A-211ENST00000474887 ZNF784Q8NCA9 323 aaPredicted RBP18.82■□□□□ 0.6
DNMT3A-211ENST00000474887 CHD4Q14839 1912 aa18.81■□□□□ 0.6
DNMT3A-211ENST00000474887 GNAT3A8MTJ3 354 aa18.81■□□□□ 0.6
DNMT3A-211ENST00000474887 MMP10P09238 476 aa18.81■□□□□ 0.6
DNMT3A-211ENST00000474887 COL3A1P02461 1466 aaPredicted RBP18.81■□□□□ 0.6
DNMT3A-211ENST00000474887 TGFB2P61812 414 aa18.8■□□□□ 0.6
DNMT3A-211ENST00000474887 SCN11AQ9UI33 1791 aa18.8■□□□□ 0.6
DNMT3A-211ENST00000474887 MRC1P22897 1456 aa18.79■□□□□ 0.6
DNMT3A-211ENST00000474887 FCHSD2O94868 740 aa18.79■□□□□ 0.6
DNMT3A-211ENST00000474887 GYS1P13807 737 aa18.79■□□□□ 0.6
DNMT3A-211ENST00000474887 PPP2R1AP30153 589 aa18.79■□□□□ 0.6
DNMT3A-211ENST00000474887 SMIM5Q71RC9 77 aa18.79■□□□□ 0.6
DNMT3A-211ENST00000474887 TEX13AQ9BXU3 409 aaPredicted RBP18.79■□□□□ 0.6
DNMT3A-211ENST00000474887 YBX3P16989 372 aaKnown RBP eCLIP18.78■□□□□ 0.6
DNMT3A-211ENST00000474887 TEFQ10587 303 aa18.78■□□□□ 0.6
DNMT3A-211ENST00000474887 CCDC87Q9NVE4 849 aa18.78■□□□□ 0.6
DNMT3A-211ENST00000474887 PARP3Q9Y6F1 533 aa18.78■□□□□ 0.6
DNMT3A-211ENST00000474887 INTS5Q6P9B9 1019 aaKnown RBP18.77■□□□□ 0.6
DNMT3A-211ENST00000474887 TTC5Q8N0Z6 440 aa18.77■□□□□ 0.6
DNMT3A-211ENST00000474887 CICQ96RK0 1608 aaPredicted RBP18.77■□□□□ 0.6
DNMT3A-211ENST00000474887 STARD3NLO95772 234 aa18.76■□□□□ 0.59
DNMT3A-211ENST00000474887 CYP19A1P11511 503 aaPredicted RBP18.76■□□□□ 0.59
DNMT3A-211ENST00000474887 CNGB1Q14028 1251 aaPredicted RBP18.76■□□□□ 0.59
DNMT3A-211ENST00000474887 COL5A3P25940 1745 aaPredicted RBP18.76■□□□□ 0.59
DNMT3A-211ENST00000474887 UTRNP46939 3433 aa18.76■□□□□ 0.59
DNMT3A-211ENST00000474887 ZPR1O75312 459 aa18.75■□□□□ 0.59
DNMT3A-211ENST00000474887 DNAJC10Q8IXB1 793 aa18.75■□□□□ 0.59
DNMT3A-211ENST00000474887 IL17REQ8NFR9 667 aa18.75■□□□□ 0.59
DNMT3A-211ENST00000474887 RSPH6AQ9H0K4 717 aa18.75■□□□□ 0.59
DNMT3A-211ENST00000474887 ADAMTS7Q9UKP4 1686 aa18.75■□□□□ 0.59
DNMT3A-211ENST00000474887 USP42Q9H9J4 1324 aaKnown RBP18.74■□□□□ 0.59
DNMT3A-211ENST00000474887 HTATSF1O43719 755 aaKnown RBP18.74■□□□□ 0.59
DNMT3A-211ENST00000474887 U2AF1L5P0DN76 240 aaPredicted RBP18.74■□□□□ 0.59
DNMT3A-211ENST00000474887 U2AF1Q01081 240 aaKnown RBP eCLIP18.74■□□□□ 0.59
DNMT3A-211ENST00000474887 SLC39A6Q13433 755 aa18.74■□□□□ 0.59
DNMT3A-211ENST00000474887 PRKAR2BP31323 418 aa18.73■□□□□ 0.59
DNMT3A-211ENST00000474887 ZNF790Q6PG37 636 aa18.73■□□□□ 0.59
DNMT3A-211ENST00000474887 SOS1Q07889 1333 aaPredicted RBP18.73■□□□□ 0.59
DNMT3A-211ENST00000474887 CEMIPQ8WUJ3 1361 aa18.72■□□□□ 0.59
DNMT3A-211ENST00000474887 A0A087WZG4 1122 aa18.72■□□□□ 0.59
DNMT3A-211ENST00000474887 NARFQ9UHQ1 456 aa18.72■□□□□ 0.59
DNMT3A-211ENST00000474887 MYH14Q7Z406 1995 aaKnown RBP18.72■□□□□ 0.59
DNMT3A-211ENST00000474887 NEFMP07197 916 aa18.71■□□□□ 0.59
DNMT3A-211ENST00000474887 RTF1Q92541 710 aaKnown RBP18.71■□□□□ 0.59
DNMT3A-211ENST00000474887 PHACTR3Q96KR7 559 aa18.71■□□□□ 0.59
DNMT3A-211ENST00000474887 PNNQ9H307 717 aaKnown RBP18.71■□□□□ 0.59
DNMT3A-211ENST00000474887 GOLGB1Q14789 3259 aaKnown RBP18.71■□□□□ 0.59
DNMT3A-211ENST00000474887 TM4SF1P30408 202 aa18.7■□□□□ 0.58
DNMT3A-211ENST00000474887 C10orf71Q711Q0 1435 aa18.7■□□□□ 0.58
DNMT3A-211ENST00000474887 FMNL2Q96PY5 1086 aa18.7■□□□□ 0.58
DNMT3A-211ENST00000474887 FKBP8Q14318 412 aa18.69■□□□□ 0.58
DNMT3A-211ENST00000474887 KCPQ6ZWJ8 1503 aa18.69■□□□□ 0.58
DNMT3A-211ENST00000474887 ZNF496Q96IT1 587 aaPredicted RBP18.68■□□□□ 0.58
DNMT3A-211ENST00000474887 SRP68Q9UHB9 627 aaKnown RBP18.68■□□□□ 0.58
DNMT3A-211ENST00000474887 TJP1Q07157 1748 aa18.68■□□□□ 0.58
DNMT3A-211ENST00000474887 HEG1Q9ULI3 1381 aa18.68■□□□□ 0.58
DNMT3A-211ENST00000474887 BTBD11A6QL63 1104 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms