RNA–Protein interactions for RNA: ENST00000474596.5

TMPRSS3-205, Transcript of transmembrane serine protease 3, humanhuman

TSL 1 (best)

Gene TMPRSS3, Length 2,105 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS3-205ENST00000474596 PLIN1O60240 522 aa19.75■□□□□ 0.75
TMPRSS3-205ENST00000474596 ILDR1Q86SU0 546 aaPredicted RBP19.75■□□□□ 0.75
TMPRSS3-205ENST00000474596 PRIM1P49642 420 aaKnown RBP19.75■□□□□ 0.75
TMPRSS3-205ENST00000474596 ERVV-2B6SEH9 535 aa19.74■□□□□ 0.75
TMPRSS3-205ENST00000474596 NECTIN2Q92692 538 aa19.74■□□□□ 0.75
TMPRSS3-205ENST00000474596 PLEKHG2Q9H7P9 1386 aa19.74■□□□□ 0.75
TMPRSS3-205ENST00000474596 ATRNO75882 1429 aa19.74■□□□□ 0.75
TMPRSS3-205ENST00000474596 NWD2Q9ULI1 1742 aa19.73■□□□□ 0.75
TMPRSS3-205ENST00000474596 TMOD3Q9NYL9 352 aa19.73■□□□□ 0.75
TMPRSS3-205ENST00000474596 VAMP4O75379 141 aa19.73■□□□□ 0.75
TMPRSS3-205ENST00000474596 RGS17Q9UGC6 210 aaPredicted RBP19.73■□□□□ 0.75
TMPRSS3-205ENST00000474596 ZNF790Q6PG37 636 aa19.72■□□□□ 0.75
TMPRSS3-205ENST00000474596 RARSP54136 660 aaKnown RBP19.72■□□□□ 0.75
TMPRSS3-205ENST00000474596 TTC5Q8N0Z6 440 aa19.72■□□□□ 0.75
TMPRSS3-205ENST00000474596 PIGBQ92521 554 aa19.72■□□□□ 0.75
TMPRSS3-205ENST00000474596 TNS2Q63HR2 1409 aa19.71■□□□□ 0.75
TMPRSS3-205ENST00000474596 ONECUT3O60422 494 aaPredicted RBP19.71■□□□□ 0.75
TMPRSS3-205ENST00000474596 EIF4A1P60842 406 aaKnown RBP19.71■□□□□ 0.75
TMPRSS3-205ENST00000474596 FRAT1Q92837 279 aaPredicted RBP19.71■□□□□ 0.75
TMPRSS3-205ENST00000474596 DLG5Q8TDM6 1919 aa19.71■□□□□ 0.75
TMPRSS3-205ENST00000474596 PTCD1O75127 700 aaKnown RBP19.7■□□□□ 0.74
TMPRSS3-205ENST00000474596 RBM6P78332 1123 aaKnown RBP19.7■□□□□ 0.74
TMPRSS3-205ENST00000474596 BABAM1Q9NWV8 329 aa19.7■□□□□ 0.74
TMPRSS3-205ENST00000474596 KCNQ2O43526 872 aa19.7■□□□□ 0.74
TMPRSS3-205ENST00000474596 EIF2S2P20042 333 aaKnown RBP19.7■□□□□ 0.74
TMPRSS3-205ENST00000474596 RXRBP28702 533 aa19.7■□□□□ 0.74
TMPRSS3-205ENST00000474596 SSH1Q8WYL5 1049 aa19.7■□□□□ 0.74
TMPRSS3-205ENST00000474596 SMC4Q9NTJ3 1288 aa19.7■□□□□ 0.74
TMPRSS3-205ENST00000474596 PRAMEF22A3QJZ6 481 aa19.69■□□□□ 0.74
TMPRSS3-205ENST00000474596 POTEAQ6S8J7 498 aa19.69■□□□□ 0.74
TMPRSS3-205ENST00000474596 ASAP1Q9ULH1 1129 aa19.69■□□□□ 0.74
TMPRSS3-205ENST00000474596 ZNF496Q96IT1 587 aaPredicted RBP19.68■□□□□ 0.74
TMPRSS3-205ENST00000474596 PARP4Q9UKK3 1724 aaKnown RBP19.68■□□□□ 0.74
TMPRSS3-205ENST00000474596 CANXP27824 592 aaKnown RBP19.67■□□□□ 0.74
TMPRSS3-205ENST00000474596 CT47B1P0C2W7 299 aaPredicted RBP19.66■□□□□ 0.74
TMPRSS3-205ENST00000474596 GTF3C3Q9Y5Q9 886 aa19.66■□□□□ 0.74
TMPRSS3-205ENST00000474596 GLI3P10071 1580 aa19.66■□□□□ 0.74
TMPRSS3-205ENST00000474596 RRP1P56182 461 aaKnown RBP19.66■□□□□ 0.74
TMPRSS3-205ENST00000474596 PTF1AQ7RTS3 328 aa19.66■□□□□ 0.74
TMPRSS3-205ENST00000474596 PKD1L3Q7Z443 1732 aa19.65■□□□□ 0.74
TMPRSS3-205ENST00000474596 NEFLP07196 543 aa19.65■□□□□ 0.74
TMPRSS3-205ENST00000474596 FKBP8Q14318 412 aa19.65■□□□□ 0.74
TMPRSS3-205ENST00000474596 RBM42Q9BTD8 480 aaKnown RBP19.65■□□□□ 0.74
TMPRSS3-205ENST00000474596 GIGYF1O75420 1035 aaPredicted RBP19.64■□□□□ 0.73
TMPRSS3-205ENST00000474596 KRT27Q7Z3Y8 459 aa19.64■□□□□ 0.73
TMPRSS3-205ENST00000474596 ATG3Q9NT62 314 aa19.64■□□□□ 0.73
TMPRSS3-205ENST00000474596 SLC4A2P04920 1241 aa19.63■□□□□ 0.73
TMPRSS3-205ENST00000474596 HDGFL1Q5TGJ6 251 aa19.63■□□□□ 0.73
TMPRSS3-205ENST00000474596 FMNL2Q96PY5 1086 aa19.63■□□□□ 0.73
TMPRSS3-205ENST00000474596 EP400Q96L91 3159 aa19.63■□□□□ 0.73
TMPRSS3-205ENST00000474596 NOB1Q9ULX3 412 aaKnown RBP19.63■□□□□ 0.73
TMPRSS3-205ENST00000474596 C20orf194Q5TEA3 1177 aa19.62■□□□□ 0.73
TMPRSS3-205ENST00000474596 CLUAP1Q96AJ1 413 aa19.62■□□□□ 0.73
TMPRSS3-205ENST00000474596 USP16Q9Y5T5 823 aa19.61■□□□□ 0.73
TMPRSS3-205ENST00000474596 ANXA1P04083 346 aa19.6■□□□□ 0.73
TMPRSS3-205ENST00000474596 ALDH1L2Q3SY69 923 aa19.6■□□□□ 0.73
TMPRSS3-205ENST00000474596 CCDC30Q5VVM6 783 aa19.6■□□□□ 0.73
TMPRSS3-205ENST00000474596 TNNQ9UQP3 1299 aa19.6■□□□□ 0.73
TMPRSS3-205ENST00000474596 SNRPA1P09661 255 aaKnown RBP19.6■□□□□ 0.73
TMPRSS3-205ENST00000474596 PIP4K2AP48426 406 aaPredicted RBP19.6■□□□□ 0.73
TMPRSS3-205ENST00000474596 MRPL50Q8N5N7 158 aaKnown RBP19.6■□□□□ 0.73
TMPRSS3-205ENST00000474596 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.6■□□□□ 0.73
TMPRSS3-205ENST00000474596 ZNF428Q96B54 188 aa19.6■□□□□ 0.73
TMPRSS3-205ENST00000474596 STK31Q9BXU1 1019 aa19.6■□□□□ 0.73
TMPRSS3-205ENST00000474596 BCL9O00512 1426 aa19.59■□□□□ 0.73
TMPRSS3-205ENST00000474596 LRRC37A3O60309 1634 aa19.58■□□□□ 0.73
TMPRSS3-205ENST00000474596 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.58■□□□□ 0.72
TMPRSS3-205ENST00000474596 RNF123Q5XPI4 1314 aa19.58■□□□□ 0.72
TMPRSS3-205ENST00000474596 CHPF2Q9P2E5 772 aa19.58■□□□□ 0.72
TMPRSS3-205ENST00000474596 G2E3Q7L622 706 aa19.57■□□□□ 0.72
TMPRSS3-205ENST00000474596 PANK1Q8TE04 598 aa19.57■□□□□ 0.72
TMPRSS3-205ENST00000474596 SHANK3Q9BYB0 1731 aa19.56■□□□□ 0.72
TMPRSS3-205ENST00000474596 MYL6BP14649 208 aa19.56■□□□□ 0.72
TMPRSS3-205ENST00000474596 KCNQ4P56696 695 aa19.56■□□□□ 0.72
TMPRSS3-205ENST00000474596 MRC1P22897 1456 aa19.56■□□□□ 0.72
TMPRSS3-205ENST00000474596 TRIM37O94972 964 aa19.55■□□□□ 0.72
TMPRSS3-205ENST00000474596 ZKSCAN2Q63HK3 967 aa19.55■□□□□ 0.72
TMPRSS3-205ENST00000474596 HEG1Q9ULI3 1381 aa19.55■□□□□ 0.72
TMPRSS3-205ENST00000474596 HOXB7P09629 217 aa19.55■□□□□ 0.72
TMPRSS3-205ENST00000474596 PROSER3Q2NL68 480 aa19.55■□□□□ 0.72
TMPRSS3-205ENST00000474596 FAM196AQ6ZSG2 479 aa19.55■□□□□ 0.72
TMPRSS3-205ENST00000474596 PHAXQ9H814 394 aaKnown RBP19.55■□□□□ 0.72
TMPRSS3-205ENST00000474596 DNAJC10Q8IXB1 793 aa19.54■□□□□ 0.72
TMPRSS3-205ENST00000474596 SLC4A9Q96Q91 983 aa19.54■□□□□ 0.72
TMPRSS3-205ENST00000474596 IPO8O15397 1037 aaKnown RBP19.54■□□□□ 0.72
TMPRSS3-205ENST00000474596 TRIM27P14373 513 aa19.54■□□□□ 0.72
TMPRSS3-205ENST00000474596 ADAMTS7Q9UKP4 1686 aa19.53■□□□□ 0.72
TMPRSS3-205ENST00000474596 A1BGP04217 495 aa19.53■□□□□ 0.72
TMPRSS3-205ENST00000474596 FTSJ3Q8IY81 847 aaKnown RBP19.53■□□□□ 0.72
TMPRSS3-205ENST00000474596 THSD7AQ9UPZ6 1657 aa19.52■□□□□ 0.72
TMPRSS3-205ENST00000474596 ATP6V1AP38606 617 aa19.52■□□□□ 0.72
TMPRSS3-205ENST00000474596 AIMP1Q12904 312 aaKnown RBP19.52■□□□□ 0.72
TMPRSS3-205ENST00000474596 ATF7IPQ6VMQ6 1270 aa19.52■□□□□ 0.72
TMPRSS3-205ENST00000474596 DBF4Q9UBU7 674 aaPredicted RBP19.52■□□□□ 0.72
TMPRSS3-205ENST00000474596 ZNF330Q9Y3S2 320 aaPredicted RBP19.52■□□□□ 0.72
TMPRSS3-205ENST00000474596 KIF16BQ96L93 1317 aa19.52■□□□□ 0.72
TMPRSS3-205ENST00000474596 SCN11AQ9UI33 1791 aa19.52■□□□□ 0.72
TMPRSS3-205ENST00000474596 RLBP1P12271 317 aa19.52■□□□□ 0.72
TMPRSS3-205ENST00000474596 SOS1Q07889 1333 aaPredicted RBP19.51■□□□□ 0.71
TMPRSS3-205ENST00000474596 LOC102724428A0A0B4J2F2 783 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms