RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 RNF17Q9BXT8 1623 aaKnown RBP11.03□□□□□ -0.64
VPS50-211ENST00000474412 C4orf48Q5BLP8 95 aa11.03□□□□□ -0.64
VPS50-211ENST00000474412 PDXDC2PQ6P474 469 aa11.03□□□□□ -0.64
VPS50-211ENST00000474412 EIF2AK4Q9P2K8 1649 aaKnown RBP11.02□□□□□ -0.64
VPS50-211ENST00000474412 MYT1Q01538 1121 aa11.02□□□□□ -0.65
VPS50-211ENST00000474412 ARID5BQ14865 1188 aa11.02□□□□□ -0.65
VPS50-211ENST00000474412 KANK4Q5T7N3 995 aaPredicted RBP11.02□□□□□ -0.65
VPS50-211ENST00000474412 ARHGAP9Q9BRR9 750 aa11.02□□□□□ -0.65
VPS50-211ENST00000474412 TRIM34Q9BYJ4 488 aa11.02□□□□□ -0.65
VPS50-211ENST00000474412 CFAP65Q6ZU64 1925 aaKnown RBP11.01□□□□□ -0.65
VPS50-211ENST00000474412 MYOM3Q5VTT5 1437 aa11.01□□□□□ -0.65
VPS50-211ENST00000474412 LCE2BO14633 110 aa11.01□□□□□ -0.65
VPS50-211ENST00000474412 CEBPAP49715 358 aaPredicted RBP11.01□□□□□ -0.65
VPS50-211ENST00000474412 SH3RF1Q7Z6J0 888 aa11.01□□□□□ -0.65
VPS50-211ENST00000474412 SPAG9O60271 1321 aaKnown RBP11.01□□□□□ -0.65
VPS50-211ENST00000474412 ZC3H13Q5T200 1668 aaKnown RBP11.01□□□□□ -0.65
VPS50-211ENST00000474412 APBB1O00213 710 aa11□□□□□ -0.65
VPS50-211ENST00000474412 SNRKQ9NRH2 765 aa11□□□□□ -0.65
VPS50-211ENST00000474412 POLR1AO95602 1720 aaPredicted RBP11□□□□□ -0.65
VPS50-211ENST00000474412 CAMSAP1Q5T5Y3 1602 aa10.99□□□□□ -0.65
VPS50-211ENST00000474412 HSPA2P54652 639 aa10.99□□□□□ -0.65
VPS50-211ENST00000474412 PTK2Q05397 1052 aa10.99□□□□□ -0.65
VPS50-211ENST00000474412 ZBTB33Q86T24 672 aa10.99□□□□□ -0.65
VPS50-211ENST00000474412 MTMR14Q8NCE2 650 aa10.99□□□□□ -0.65
VPS50-211ENST00000474412 ST8SIA5O15466 376 aa10.98□□□□□ -0.65
VPS50-211ENST00000474412 AVPP01185 164 aa10.98□□□□□ -0.65
VPS50-211ENST00000474412 MPNDQ8N594 471 aa10.98□□□□□ -0.65
VPS50-211ENST00000474412 HPS1Q92902 700 aa10.98□□□□□ -0.65
VPS50-211ENST00000474412 GJD4Q96KN9 370 aaPredicted RBP10.98□□□□□ -0.65
VPS50-211ENST00000474412 C1QTNF2Q9BXJ5 285 aa10.98□□□□□ -0.65
VPS50-211ENST00000474412 CEP170BQ9Y4F5 1589 aaPredicted RBP10.98□□□□□ -0.65
VPS50-211ENST00000474412 DEPDC5O75140 1603 aa10.98□□□□□ -0.65
VPS50-211ENST00000474412 AXIN1O15169 862 aa10.97□□□□□ -0.65
VPS50-211ENST00000474412 TMEM132AQ24JP5 1023 aa10.97□□□□□ -0.65
VPS50-211ENST00000474412 GPSM3Q9Y4H4 160 aa10.97□□□□□ -0.65
VPS50-211ENST00000474412 RTEL1-TNFRSF6BF6WH68 1400 aa10.97□□□□□ -0.65
VPS50-211ENST00000474412 KDM5DQ9BY66 1539 aa10.97□□□□□ -0.65
VPS50-211ENST00000474412 UHRF1BP1Q6BDS2 1440 aa10.96□□□□□ -0.65
VPS50-211ENST00000474412 SOCS7O14512 581 aa10.96□□□□□ -0.65
VPS50-211ENST00000474412 CTC1Q2NKJ3 1217 aa10.96□□□□□ -0.65
VPS50-211ENST00000474412 ERFEQ4G0M1 354 aa10.96□□□□□ -0.65
VPS50-211ENST00000474412 CDK15Q96Q40 435 aa10.96□□□□□ -0.65
VPS50-211ENST00000474412 CNTLNQ9NXG0 1405 aa10.95□□□□□ -0.66
VPS50-211ENST00000474412 ADH1CP00326 375 aa10.95□□□□□ -0.66
VPS50-211ENST00000474412 NNTQ13423 1086 aa10.95□□□□□ -0.66
VPS50-211ENST00000474412 VASH1Q7L8A9 365 aaPredicted RBP10.95□□□□□ -0.66
VPS50-211ENST00000474412 SLC10A4Q96EP9 437 aa10.95□□□□□ -0.66
VPS50-211ENST00000474412 AAASQ9NRG9 546 aa10.95□□□□□ -0.66
VPS50-211ENST00000474412 NDUFB9Q9Y6M9 179 aa10.95□□□□□ -0.66
VPS50-211ENST00000474412 TCOF1Q13428 1488 aaKnown RBP10.94□□□□□ -0.66
VPS50-211ENST00000474412 MIA2Q96PC5 1412 aa10.94□□□□□ -0.66
VPS50-211ENST00000474412 TRMT44Q8IYL2 757 aaKnown RBP10.94□□□□□ -0.66
VPS50-211ENST00000474412 CRIPAKQ8N1N5 446 aa10.94□□□□□ -0.66
VPS50-211ENST00000474412 ADAM32Q8TC27 787 aa10.94□□□□□ -0.66
VPS50-211ENST00000474412 PRDM15P57071 1507 aaPredicted RBP10.94□□□□□ -0.66
VPS50-211ENST00000474412 SHANK2Q9UPX8 1470 aa10.93□□□□□ -0.66
VPS50-211ENST00000474412 FGD6Q6ZV73 1430 aa10.93□□□□□ -0.66
VPS50-211ENST00000474412 FSHRP23945 695 aa10.93□□□□□ -0.66
VPS50-211ENST00000474412 ABCC3O15438 1527 aa10.93□□□□□ -0.66
VPS50-211ENST00000474412 FAM135AQ9P2D6 1515 aa10.93□□□□□ -0.66
VPS50-211ENST00000474412 PTPRKQ15262 1439 aa10.92□□□□□ -0.66
VPS50-211ENST00000474412 SMCPP49901 116 aaPredicted RBP10.92□□□□□ -0.66
VPS50-211ENST00000474412 OCSTAMPQ9BR26 566 aa10.92□□□□□ -0.66
VPS50-211ENST00000474412 PRM3Q9NNZ6 103 aa10.92□□□□□ -0.66
VPS50-211ENST00000474412 MAP4K5Q9Y4K4 846 aa10.92□□□□□ -0.66
VPS50-211ENST00000474412 DAPK1P53355 1430 aa10.92□□□□□ -0.66
VPS50-211ENST00000474412 MYO5BQ9ULV0 1848 aa10.91□□□□□ -0.66
VPS50-211ENST00000474412 DUOX2Q9NRD8 1548 aa10.91□□□□□ -0.66
VPS50-211ENST00000474412 NR5A1Q13285 461 aa10.91□□□□□ -0.66
VPS50-211ENST00000474412 ABCC5O15440 1437 aa10.91□□□□□ -0.66
VPS50-211ENST00000474412 NPATQ14207 1427 aa10.91□□□□□ -0.66
VPS50-211ENST00000474412 DHX29Q7Z478 1369 aaKnown RBP10.9□□□□□ -0.66
VPS50-211ENST00000474412 ZBBXA8MT70 800 aa10.9□□□□□ -0.66
VPS50-211ENST00000474412 CDV3Q9UKY7 258 aaKnown RBP10.9□□□□□ -0.66
VPS50-211ENST00000474412 NEURL4Q96JN8 1562 aa10.9□□□□□ -0.67
VPS50-211ENST00000474412 ZMYM3Q14202 1370 aa10.9□□□□□ -0.67
VPS50-211ENST00000474412 UBR1Q8IWV7 1749 aa10.89□□□□□ -0.67
VPS50-211ENST00000474412 PZPP20742 1482 aa10.89□□□□□ -0.67
VPS50-211ENST00000474412 GRM5P41594 1212 aa10.89□□□□□ -0.67
VPS50-211ENST00000474412 DZIP3Q86Y13 1208 aaKnown RBP10.89□□□□□ -0.67
VPS50-211ENST00000474412 SPATA31D1Q6ZQQ2 1576 aa10.89□□□□□ -0.67
VPS50-211ENST00000474412 CAPN5O15484 640 aaPredicted RBP10.88□□□□□ -0.67
VPS50-211ENST00000474412 FBXO45P0C2W1 286 aa10.88□□□□□ -0.67
VPS50-211ENST00000474412 WDR4P57081 412 aaKnown RBP10.88□□□□□ -0.67
VPS50-211ENST00000474412 NCOA1Q15788 1441 aa10.88□□□□□ -0.67
VPS50-211ENST00000474412 GGT6Q6P531 493 aa10.88□□□□□ -0.67
VPS50-211ENST00000474412 NR3C2P08235 984 aa10.87□□□□□ -0.67
VPS50-211ENST00000474412 MCM6Q14566 821 aa10.87□□□□□ -0.67
VPS50-211ENST00000474412 DACH1Q9UI36 760 aa10.87□□□□□ -0.67
VPS50-211ENST00000474412 TBC1D2BQ9UPU7 963 aa10.87□□□□□ -0.67
VPS50-211ENST00000474412 PCDHB9Q9Y5E1 797 aa10.87□□□□□ -0.67
VPS50-211ENST00000474412 GCC2Q8IWJ2 1684 aa10.86□□□□□ -0.67
VPS50-211ENST00000474412 STRCP1A6NGW2 1772 aa10.86□□□□□ -0.67
VPS50-211ENST00000474412 NBPF20Q3BBV1 942 aa10.86□□□□□ -0.67
VPS50-211ENST00000474412 KCTD15Q96SI1 283 aaPredicted RBP10.86□□□□□ -0.67
VPS50-211ENST00000474412 PIK3C2BO00750 1634 aa10.86□□□□□ -0.67
VPS50-211ENST00000474412 UNC13BO14795 1591 aa10.86□□□□□ -0.67
VPS50-211ENST00000474412 VWDEQ8N2E2 1590 aa10.86□□□□□ -0.67
VPS50-211ENST00000474412 LTBP4Q8N2S1 1624 aa10.85□□□□□ -0.67
VPS50-211ENST00000474412 KIF3BO15066 747 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms