RNA–Protein interactions for RNA: ENST00000473988.1

RRP1-203, Transcript of ribosomal RNA processing 1, humanhuman

TSL 3

Gene RRP1, Length 627 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-203ENST00000473988 USP54Q70EL1 1684 aa8.36□□□□□ -1.07
RRP1-203ENST00000473988 CNTNAP1P78357 1384 aa8.35□□□□□ -1.07
RRP1-203ENST00000473988 EVC2Q86UK5 1308 aa8.35□□□□□ -1.07
RRP1-203ENST00000473988 MEGF6O75095 1541 aa8.35□□□□□ -1.07
RRP1-203ENST00000473988 HSPA8P11142 646 aaKnown RBP8.35□□□□□ -1.07
RRP1-203ENST00000473988 RASSF7Q02833 373 aa8.35□□□□□ -1.07
RRP1-203ENST00000473988 SMARCC1Q92922 1105 aaPredicted RBP8.35□□□□□ -1.07
RRP1-203ENST00000473988 NSD3Q9BZ95 1437 aa8.35□□□□□ -1.07
RRP1-203ENST00000473988 C4BP0C0L5 1744 aa8.34□□□□□ -1.07
RRP1-203ENST00000473988 TOGARAM1Q9Y4F4 1720 aa8.34□□□□□ -1.07
RRP1-203ENST00000473988 C5P01031 1676 aa8.34□□□□□ -1.07
RRP1-203ENST00000473988 LOC102724428A0A0B4J2F2 783 aa8.34□□□□□ -1.07
RRP1-203ENST00000473988 CHRNA5P30532 468 aa8.34□□□□□ -1.07
RRP1-203ENST00000473988 SIK1P57059 783 aa8.34□□□□□ -1.07
RRP1-203ENST00000473988 ITPK1Q13572 414 aa8.34□□□□□ -1.07
RRP1-203ENST00000473988 USHBP1Q8N6Y0 703 aa8.34□□□□□ -1.07
RRP1-203ENST00000473988 PIGBQ92521 554 aa8.34□□□□□ -1.07
RRP1-203ENST00000473988 N4BP2Q86UW6 1770 aaPredicted RBP8.34□□□□□ -1.07
RRP1-203ENST00000473988 KIAA1551Q9HCM1 1747 aa8.34□□□□□ -1.07
RRP1-203ENST00000473988 QRICH2Q9H0J4 1663 aa8.34□□□□□ -1.08
RRP1-203ENST00000473988 POTEIP0CG38 1075 aa8.33□□□□□ -1.08
RRP1-203ENST00000473988 POTEJP0CG39 1038 aa8.33□□□□□ -1.08
RRP1-203ENST00000473988 FBLN1P23142 703 aa8.33□□□□□ -1.08
RRP1-203ENST00000473988 TRAPPC3LQ5T215 181 aa8.33□□□□□ -1.08
RRP1-203ENST00000473988 NBPF6Q5VWK0 638 aa8.33□□□□□ -1.08
RRP1-203ENST00000473988 CHADLQ6NUI6 762 aa8.33□□□□□ -1.08
RRP1-203ENST00000473988 NBPF4Q96M43 638 aa8.33□□□□□ -1.08
RRP1-203ENST00000473988 PARP3Q9Y6F1 533 aa8.33□□□□□ -1.08
RRP1-203ENST00000473988 ZC3H4Q9UPT8 1303 aaKnown RBP8.32□□□□□ -1.08
RRP1-203ENST00000473988 CYP27B1O15528 508 aa8.32□□□□□ -1.08
RRP1-203ENST00000473988 ATXN8OSP0DMR3 200 aa8.32□□□□□ -1.08
RRP1-203ENST00000473988 GYS1P13807 737 aa8.32□□□□□ -1.08
RRP1-203ENST00000473988 LMNB1P20700 586 aa8.32□□□□□ -1.08
RRP1-203ENST00000473988 HOXC9P31274 260 aa8.32□□□□□ -1.08
RRP1-203ENST00000473988 ARHGEF1Q92888 912 aaKnown RBP8.32□□□□□ -1.08
RRP1-203ENST00000473988 CFAP44Q96MT7 982 aa8.32□□□□□ -1.08
RRP1-203ENST00000473988 SBNO2Q9Y2G9 1366 aa8.32□□□□□ -1.08
RRP1-203ENST00000473988 TNRC6CQ9HCJ0 1690 aaKnown RBP8.31□□□□□ -1.08
RRP1-203ENST00000473988 ATP6V1AP38606 617 aa8.31□□□□□ -1.08
RRP1-203ENST00000473988 SAMD1Q6SPF0 538 aaPredicted RBP8.31□□□□□ -1.08
RRP1-203ENST00000473988 RAPGEF4Q8WZA2 1011 aa8.31□□□□□ -1.08
RRP1-203ENST00000473988 ASAP1Q9ULH1 1129 aa8.31□□□□□ -1.08
RRP1-203ENST00000473988 RTCBQ9Y3I0 505 aaKnown RBP8.31□□□□□ -1.08
RRP1-203ENST00000473988 MAP3K19Q56UN5 1328 aa8.3□□□□□ -1.08
RRP1-203ENST00000473988 KDM6AO15550 1401 aaPredicted RBP8.3□□□□□ -1.08
RRP1-203ENST00000473988 UBR3Q6ZT12 1888 aa8.3□□□□□ -1.08
RRP1-203ENST00000473988 PKD1L3Q7Z443 1732 aa8.3□□□□□ -1.08
RRP1-203ENST00000473988 TATP17735 454 aaPredicted RBP8.3□□□□□ -1.08
RRP1-203ENST00000473988 AMPHP49418 695 aa8.3□□□□□ -1.08
RRP1-203ENST00000473988 PDE4DIPQ5VU43 2346 aa8.3□□□□□ -1.08
RRP1-203ENST00000473988 CGNL1Q0VF96 1302 aa8.29□□□□□ -1.08
RRP1-203ENST00000473988 PCDH11XQ9BZA7 1347 aa8.29□□□□□ -1.08
RRP1-203ENST00000473988 PCDH11YQ9BZA8 1340 aa8.29□□□□□ -1.08
RRP1-203ENST00000473988 TAF1LQ8IZX4 1826 aa8.29□□□□□ -1.08
RRP1-203ENST00000473988 KIF13BQ9NQT8 1826 aa8.29□□□□□ -1.08
RRP1-203ENST00000473988 RFC4P35249 363 aa8.29□□□□□ -1.08
RRP1-203ENST00000473988 DDR1Q08345 913 aa8.29□□□□□ -1.08
RRP1-203ENST00000473988 DPY19L2Q6NUT2 758 aa8.29□□□□□ -1.08
RRP1-203ENST00000473988 KIAA1210Q9ULL0 1709 aa8.29□□□□□ -1.08
RRP1-203ENST00000473988 PASKQ96RG2 1323 aa8.29□□□□□ -1.08
RRP1-203ENST00000473988 TMEM88BA6NKF7 163 aa8.28□□□□□ -1.08
RRP1-203ENST00000473988 MAP2K1Q02750 393 aaPredicted RBP8.28□□□□□ -1.08
RRP1-203ENST00000473988 TMC1Q8TDI8 760 aa8.28□□□□□ -1.08
RRP1-203ENST00000473988 SLC12A5Q9H2X9 1139 aa8.28□□□□□ -1.08
RRP1-203ENST00000473988 FAM208AQ9UK61 1670 aaKnown RBP8.27□□□□□ -1.08
RRP1-203ENST00000473988 CD163L1Q9NR16 1453 aa8.27□□□□□ -1.09
RRP1-203ENST00000473988 NFKBIEO00221 500 aa8.27□□□□□ -1.09
RRP1-203ENST00000473988 ITGBL1O95965 494 aaPredicted RBP8.27□□□□□ -1.09
RRP1-203ENST00000473988 FKBP8Q14318 412 aa8.27□□□□□ -1.09
RRP1-203ENST00000473988 DEFB115Q30KQ5 88 aa8.27□□□□□ -1.09
RRP1-203ENST00000473988 SLC4A9Q96Q91 983 aa8.27□□□□□ -1.09
RRP1-203ENST00000473988 ATG3Q9NT62 314 aa8.27□□□□□ -1.09
RRP1-203ENST00000473988 SRP68Q9UHB9 627 aaKnown RBP8.27□□□□□ -1.09
RRP1-203ENST00000473988 LTN1O94822 1766 aa8.27□□□□□ -1.09
RRP1-203ENST00000473988 WDR33Q9C0J8 1336 aaKnown RBP8.27□□□□□ -1.09
RRP1-203ENST00000473988 RASSF10A6NK89 507 aa8.26□□□□□ -1.09
RRP1-203ENST00000473988 RPS6KA4O75676 772 aa8.26□□□□□ -1.09
RRP1-203ENST00000473988 DDNO94850 711 aaPredicted RBP8.26□□□□□ -1.09
RRP1-203ENST00000473988 NKX1-1Q15270 411 aaPredicted RBP8.26□□□□□ -1.09
RRP1-203ENST00000473988 MCOLN1Q9GZU1 580 aa8.26□□□□□ -1.09
RRP1-203ENST00000473988 TMOD3Q9NYL9 352 aa8.26□□□□□ -1.09
RRP1-203ENST00000473988 TSKSQ9UJT2 592 aa8.26□□□□□ -1.09
RRP1-203ENST00000473988 C4AP0C0L4 1744 aa8.26□□□□□ -1.09
RRP1-203ENST00000473988 BRCA1P38398 1863 aaKnown RBP8.26□□□□□ -1.09
RRP1-203ENST00000473988 RAB3GAP2Q9H2M9 1393 aa8.25□□□□□ -1.09
RRP1-203ENST00000473988 ARFGEF1Q9Y6D6 1849 aa8.25□□□□□ -1.09
RRP1-203ENST00000473988 RRS1Q15050 365 aaKnown RBP8.25□□□□□ -1.09
RRP1-203ENST00000473988 RC3H1Q5TC82 1133 aaKnown RBP8.25□□□□□ -1.09
RRP1-203ENST00000473988 HDGFL2Q7Z4V5 671 aaPredicted RBP8.25□□□□□ -1.09
RRP1-203ENST00000473988 SBF1O95248 1867 aa8.24□□□□□ -1.09
RRP1-203ENST00000473988 POLRMTO00411 1230 aaKnown RBP8.24□□□□□ -1.09
RRP1-203ENST00000473988 ERFEQ4G0M1 354 aa8.24□□□□□ -1.09
RRP1-203ENST00000473988 LDHDQ86WU2 507 aa8.24□□□□□ -1.09
RRP1-203ENST00000473988 TTLL6Q8N841 843 aa8.24□□□□□ -1.09
RRP1-203ENST00000473988 COG3Q96JB2 828 aa8.24□□□□□ -1.09
RRP1-203ENST00000473988 RBM42Q9BTD8 480 aaKnown RBP8.24□□□□□ -1.09
RRP1-203ENST00000473988 EDC4Q6P2E9 1401 aaKnown RBP8.23□□□□□ -1.09
RRP1-203ENST00000473988 TM4SF1P30408 202 aa8.23□□□□□ -1.09
RRP1-203ENST00000473988 HSP90AB2PQ58FF8 381 aa8.23□□□□□ -1.09
RRP1-203ENST00000473988 PRPF38BQ5VTL8 546 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms