RNA–Protein interactions for RNA: ENST00000473978.5

PCYT1A-214, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-214ENST00000473978 SLC12A5Q9H2X9 1139 aa18.18■□□□□ 0.5
PCYT1A-214ENST00000473978 CYP27B1O15528 508 aa18.17■□□□□ 0.5
PCYT1A-214ENST00000473978 TATP17735 454 aaPredicted RBP18.17■□□□□ 0.5
PCYT1A-214ENST00000473978 ITPK1Q13572 414 aa18.17■□□□□ 0.5
PCYT1A-214ENST00000473978 CCDC87Q9NVE4 849 aa18.17■□□□□ 0.5
PCYT1A-214ENST00000473978 TMF1P82094 1093 aa18.16■□□□□ 0.5
PCYT1A-214ENST00000473978 FAM161AQ3B820 660 aa18.16■□□□□ 0.5
PCYT1A-214ENST00000473978 NLGN1Q8N2Q7 840 aa18.16■□□□□ 0.5
PCYT1A-214ENST00000473978 FOXN1O15353 648 aa18.15■□□□□ 0.5
PCYT1A-214ENST00000473978 PIM2Q9P1W9 311 aa18.15■□□□□ 0.5
PCYT1A-214ENST00000473978 A0A1W2PP64 1363 aa18.14■□□□□ 0.5
PCYT1A-214ENST00000473978 SBF1O95248 1867 aa18.14■□□□□ 0.49
PCYT1A-214ENST00000473978 VEGFAP15692 232 aaPredicted RBP18.14■□□□□ 0.49
PCYT1A-214ENST00000473978 DALRD3Q5D0E6 543 aaKnown RBP18.14■□□□□ 0.49
PCYT1A-214ENST00000473978 PRDM10Q9NQV6 1147 aa18.14■□□□□ 0.49
PCYT1A-214ENST00000473978 C4AP0C0L4 1744 aa18.13■□□□□ 0.49
PCYT1A-214ENST00000473978 ATP6V1AP38606 617 aa18.13■□□□□ 0.49
PCYT1A-214ENST00000473978 TRAPPC3LQ5T215 181 aa18.13■□□□□ 0.49
PCYT1A-214ENST00000473978 COG3Q96JB2 828 aa18.12■□□□□ 0.49
PCYT1A-214ENST00000473978 MKRN1Q9UHC7 482 aaKnown RBP18.12■□□□□ 0.49
PCYT1A-214ENST00000473978 PARP3Q9Y6F1 533 aa18.12■□□□□ 0.49
PCYT1A-214ENST00000473978 ROCK2O75116 1388 aaKnown RBP18.11■□□□□ 0.49
PCYT1A-214ENST00000473978 GYS1P13807 737 aa18.11■□□□□ 0.49
PCYT1A-214ENST00000473978 TERF2IPQ9NYB0 399 aa18.11■□□□□ 0.49
PCYT1A-214ENST00000473978 ASAP1Q9ULH1 1129 aa18.11■□□□□ 0.49
PCYT1A-214ENST00000473978 GLTPD2A6NH11 291 aa18.1■□□□□ 0.49
PCYT1A-214ENST00000473978 ARHGEF1Q92888 912 aaKnown RBP18.1■□□□□ 0.49
PCYT1A-214ENST00000473978 RTCBQ9Y3I0 505 aaKnown RBP18.1■□□□□ 0.49
PCYT1A-214ENST00000473978 RTL1A6NKG5 1358 aa18.1■□□□□ 0.49
PCYT1A-214ENST00000473978 RRS1Q15050 365 aaKnown RBP18.09■□□□□ 0.49
PCYT1A-214ENST00000473978 L3MBTL2Q969R5 705 aa18.09■□□□□ 0.49
PCYT1A-214ENST00000473978 ZC3H4Q9UPT8 1303 aaKnown RBP18.09■□□□□ 0.49
PCYT1A-214ENST00000473978 RASSF7Q02833 373 aa18.08■□□□□ 0.49
PCYT1A-214ENST00000473978 NKX1-1Q15270 411 aaPredicted RBP18.08■□□□□ 0.49
PCYT1A-214ENST00000473978 CHRNA5P30532 468 aa18.07■□□□□ 0.48
PCYT1A-214ENST00000473978 CREBZFQ9NS37 354 aa18.07■□□□□ 0.48
PCYT1A-214ENST00000473978 KDM6AO15550 1401 aaPredicted RBP18.07■□□□□ 0.48
PCYT1A-214ENST00000473978 SMG6Q86US8 1419 aaKnown RBP18.07■□□□□ 0.48
PCYT1A-214ENST00000473978 POTECB2RU33 542 aa18.06■□□□□ 0.48
PCYT1A-214ENST00000473978 CTCFP49711 727 aaPredicted RBP18.06■□□□□ 0.48
PCYT1A-214ENST00000473978 ABHD8Q96I13 439 aa18.06■□□□□ 0.48
PCYT1A-214ENST00000473978 TMOD3Q9NYL9 352 aa18.06■□□□□ 0.48
PCYT1A-214ENST00000473978 ADRA2BP18089 450 aa18.05■□□□□ 0.48
PCYT1A-214ENST00000473978 RFC4P35249 363 aa18.05■□□□□ 0.48
PCYT1A-214ENST00000473978 ATG3Q9NT62 314 aa18.05■□□□□ 0.48
PCYT1A-214ENST00000473978 HSP90AB2PQ58FF8 381 aa18.04■□□□□ 0.48
PCYT1A-214ENST00000473978 LMNB1P20700 586 aa18.03■□□□□ 0.48
PCYT1A-214ENST00000473978 LBX1P52954 281 aa18.03■□□□□ 0.48
PCYT1A-214ENST00000473978 SLC4A9Q96Q91 983 aa18.03■□□□□ 0.48
PCYT1A-214ENST00000473978 CNTNAP1P78357 1384 aa18.02■□□□□ 0.48
PCYT1A-214ENST00000473978 MLLT1Q03111 559 aaPredicted RBP18.02■□□□□ 0.48
PCYT1A-214ENST00000473978 AIDAQ96BJ3 306 aa18.02■□□□□ 0.48
PCYT1A-214ENST00000473978 KDRP35968 1356 aa18.01■□□□□ 0.47
PCYT1A-214ENST00000473978 DDR1Q08345 913 aa18.01■□□□□ 0.47
PCYT1A-214ENST00000473978 RC3H1Q5TC82 1133 aaKnown RBP18.01■□□□□ 0.47
PCYT1A-214ENST00000473978 INSRP06213 1382 aa18■□□□□ 0.47
PCYT1A-214ENST00000473978 RPS6KA4O75676 772 aa18■□□□□ 0.47
PCYT1A-214ENST00000473978 CNTNAP4Q9C0A0 1308 aa17.99■□□□□ 0.47
PCYT1A-214ENST00000473978 FKBP8Q14318 412 aa17.98■□□□□ 0.47
PCYT1A-214ENST00000473978 CHADLQ6NUI6 762 aa17.98■□□□□ 0.47
PCYT1A-214ENST00000473978 WBP1LQ9NX94 342 aa17.98■□□□□ 0.47
PCYT1A-214ENST00000473978 SRP68Q9UHB9 627 aaKnown RBP17.98■□□□□ 0.47
PCYT1A-214ENST00000473978 SPG7Q9UQ90 795 aa17.98■□□□□ 0.47
PCYT1A-214ENST00000473978 POTEIP0CG38 1075 aa17.98■□□□□ 0.47
PCYT1A-214ENST00000473978 POTEJP0CG39 1038 aa17.98■□□□□ 0.47
PCYT1A-214ENST00000473978 VEGFBP49765 207 aa17.98■□□□□ 0.47
PCYT1A-214ENST00000473978 RGS19P49795 217 aa17.98■□□□□ 0.47
PCYT1A-214ENST00000473978 RBM42Q9BTD8 480 aaKnown RBP17.98■□□□□ 0.47
PCYT1A-214ENST00000473978 TIAM2Q8IVF5 1701 aa17.97■□□□□ 0.47
PCYT1A-214ENST00000473978 COL5A3P25940 1745 aaPredicted RBP17.96■□□□□ 0.47
PCYT1A-214ENST00000473978 PUS7Q96PZ0 661 aaKnown RBP17.96■□□□□ 0.47
PCYT1A-214ENST00000473978 GGNBP2Q9H3C7 697 aa17.96■□□□□ 0.47
PCYT1A-214ENST00000473978 TNRC18O15417 2968 aaPredicted RBP17.95■□□□□ 0.46
PCYT1A-214ENST00000473978 MYH14Q7Z406 1995 aaKnown RBP17.95■□□□□ 0.46
PCYT1A-214ENST00000473978 CCDC85CA6NKD9 419 aa17.95■□□□□ 0.46
PCYT1A-214ENST00000473978 POLRMTO00411 1230 aaKnown RBP17.95■□□□□ 0.46
PCYT1A-214ENST00000473978 HSPA8P11142 646 aaKnown RBP17.95■□□□□ 0.46
PCYT1A-214ENST00000473978 CCDC88AQ3V6T2 1871 aa17.95■□□□□ 0.46
PCYT1A-214ENST00000473978 DPY19L2Q6NUT2 758 aa17.95■□□□□ 0.46
PCYT1A-214ENST00000473978 FLT4P35916 1363 aa17.95■□□□□ 0.46
PCYT1A-214ENST00000473978 NFKBIEO00221 500 aa17.94■□□□□ 0.46
PCYT1A-214ENST00000473978 FYB1O15117 783 aa17.94■□□□□ 0.46
PCYT1A-214ENST00000473978 PHKG2P15735 406 aa17.94■□□□□ 0.46
PCYT1A-214ENST00000473978 ZNF831Q5JPB2 1677 aa17.94■□□□□ 0.46
PCYT1A-214ENST00000473978 USP42Q9H9J4 1324 aaKnown RBP17.93■□□□□ 0.46
PCYT1A-214ENST00000473978 NCAPD2Q15021 1401 aa17.93■□□□□ 0.46
PCYT1A-214ENST00000473978 IFNL2Q8IZJ0 200 aa17.93■□□□□ 0.46
PCYT1A-214ENST00000473978 TM4SF1P30408 202 aa17.92■□□□□ 0.46
PCYT1A-214ENST00000473978 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.92■□□□□ 0.464e-7■□□□□ 10.5
PCYT1A-214ENST00000473978 PASKQ96RG2 1323 aa17.92■□□□□ 0.46
PCYT1A-214ENST00000473978 VIRMAQ69YN4 1812 aaKnown RBP17.92■□□□□ 0.46
PCYT1A-214ENST00000473978 CARD11Q9BXL7 1154 aa17.91■□□□□ 0.46
PCYT1A-214ENST00000473978 KIF24Q5T7B8 1368 aa17.9■□□□□ 0.46
PCYT1A-214ENST00000473978 TTLL6Q8N841 843 aa17.89■□□□□ 0.46
PCYT1A-214ENST00000473978 TONSLQ96HA7 1378 aa17.89■□□□□ 0.45
PCYT1A-214ENST00000473978 TMEM88BA6NKF7 163 aa17.89■□□□□ 0.45
PCYT1A-214ENST00000473978 CRKLP46109 303 aaKnown RBP17.89■□□□□ 0.45
PCYT1A-214ENST00000473978 SIN3AQ96ST3 1273 aa17.89■□□□□ 0.45
PCYT1A-214ENST00000473978 EMILIN1Q9Y6C2 1016 aa17.88■□□□□ 0.45
PCYT1A-214ENST00000473978 DDNO94850 711 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms