RNA–Protein interactions for RNA: ENST00000473798.1

LINC00115-201, long intergenic non-protein coding RNA 115, humanhuman

BASIC

Gene LINC00115, Length 1,317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00115-201ENST00000473798 CABP4P57796 275 aa18.53■□□□□ 0.56
LINC00115-201ENST00000473798 SEPT12Q8IYM1 358 aa18.53■□□□□ 0.56
LINC00115-201ENST00000473798 SLC52A2Q9HAB3 445 aa18.53■□□□□ 0.56
LINC00115-201ENST00000473798 ADAMTS7Q9UKP4 1686 aa18.53■□□□□ 0.56
LINC00115-201ENST00000473798 SCN11AQ9UI33 1791 aa18.52■□□□□ 0.56
LINC00115-201ENST00000473798 NFATC2IPQ8NCF5 419 aa18.52■□□□□ 0.56
LINC00115-201ENST00000473798 RGS17Q9UGC6 210 aaPredicted RBP18.52■□□□□ 0.56
LINC00115-201ENST00000473798 THSD7AQ9UPZ6 1657 aa18.52■□□□□ 0.55
LINC00115-201ENST00000473798 VIRMAQ69YN4 1812 aaKnown RBP18.51■□□□□ 0.55
LINC00115-201ENST00000473798 BTBD11A6QL63 1104 aa18.51■□□□□ 0.55
LINC00115-201ENST00000473798 KCNQ3O43525 872 aa18.51■□□□□ 0.55
LINC00115-201ENST00000473798 KRT24Q2M2I5 525 aa18.51■□□□□ 0.55
LINC00115-201ENST00000473798 ELL2O00472 640 aaPredicted RBP18.5■□□□□ 0.55
LINC00115-201ENST00000473798 ONECUT3O60422 494 aaPredicted RBP18.5■□□□□ 0.55
LINC00115-201ENST00000473798 C8orf58Q8NAV2 365 aa18.5■□□□□ 0.55
LINC00115-201ENST00000473798 RCAN3Q9UKA8 241 aa18.5■□□□□ 0.55
LINC00115-201ENST00000473798 ERVV-2B6SEH9 535 aa18.49■□□□□ 0.55
LINC00115-201ENST00000473798 RBM6P78332 1123 aaKnown RBP18.49■□□□□ 0.55
LINC00115-201ENST00000473798 SLC39A6Q13433 755 aa18.49■□□□□ 0.55
LINC00115-201ENST00000473798 FAM182BQ5T319 152 aa18.49■□□□□ 0.55
LINC00115-201ENST00000473798 TSPYL6Q8N831 410 aa18.49■□□□□ 0.55
LINC00115-201ENST00000473798 POTEAQ6S8J7 498 aa18.49■□□□□ 0.55
LINC00115-201ENST00000473798 ACSBG1Q96GR2 724 aa18.49■□□□□ 0.55
LINC00115-201ENST00000473798 TOGARAM1Q9Y4F4 1720 aa18.49■□□□□ 0.55
LINC00115-201ENST00000473798 MRC1P22897 1456 aa18.48■□□□□ 0.55
LINC00115-201ENST00000473798 CNKSR2Q8WXI2 1034 aa18.48■□□□□ 0.55
LINC00115-201ENST00000473798 SYTL4Q96C24 671 aaPredicted RBP18.48■□□□□ 0.55
LINC00115-201ENST00000473798 BABAM1Q9NWV8 329 aa18.48■□□□□ 0.55
LINC00115-201ENST00000473798 SUPT16HQ9Y5B9 1047 aaKnown RBP18.48■□□□□ 0.55
LINC00115-201ENST00000473798 SIPA1L3O60292 1781 aaPredicted RBP18.47■□□□□ 0.55
LINC00115-201ENST00000473798 RXRBP28702 533 aa18.47■□□□□ 0.55
LINC00115-201ENST00000473798 PRIM1P49642 420 aaKnown RBP18.47■□□□□ 0.55
LINC00115-201ENST00000473798 RNF39Q9H2S5 420 aa18.47■□□□□ 0.55
LINC00115-201ENST00000473798 TMOD3Q9NYL9 352 aa18.47■□□□□ 0.55
LINC00115-201ENST00000473798 PIGBQ92521 554 aa18.46■□□□□ 0.55
LINC00115-201ENST00000473798 EIF4A1P60842 406 aaKnown RBP18.45■□□□□ 0.54
LINC00115-201ENST00000473798 TWISTNBQ3B726 338 aaPredicted RBP18.45■□□□□ 0.54
LINC00115-201ENST00000473798 TCERG1O14776 1098 aaKnown RBP18.44■□□□□ 0.54
LINC00115-201ENST00000473798 VAMP4O75379 141 aa18.44■□□□□ 0.54
LINC00115-201ENST00000473798 ZNF790Q6PG37 636 aa18.44■□□□□ 0.54
LINC00115-201ENST00000473798 BCL2L13Q9BXK5 485 aa18.44■□□□□ 0.54
LINC00115-201ENST00000473798 KDM3BQ7LBC6 1761 aa18.43■□□□□ 0.54
LINC00115-201ENST00000473798 DOT1LQ8TEK3 1739 aa18.43■□□□□ 0.54
LINC00115-201ENST00000473798 RARSP54136 660 aaKnown RBP18.43■□□□□ 0.54
LINC00115-201ENST00000473798 KAT6BQ8WYB5 2073 aa18.42■□□□□ 0.54
LINC00115-201ENST00000473798 KCNQ2O43526 872 aa18.42■□□□□ 0.54
LINC00115-201ENST00000473798 BCAR3O75815 825 aa18.42■□□□□ 0.54
LINC00115-201ENST00000473798 TTC5Q8N0Z6 440 aa18.42■□□□□ 0.54
LINC00115-201ENST00000473798 ASAP1Q9ULH1 1129 aa18.42■□□□□ 0.54
LINC00115-201ENST00000473798 DCAF8L1A6NGE4 600 aa18.41■□□□□ 0.54
LINC00115-201ENST00000473798 CT47B1P0C2W7 299 aaPredicted RBP18.41■□□□□ 0.54
LINC00115-201ENST00000473798 KRT27Q7Z3Y8 459 aa18.41■□□□□ 0.54
LINC00115-201ENST00000473798 NECTIN2Q92692 538 aa18.41■□□□□ 0.54
LINC00115-201ENST00000473798 ZNF496Q96IT1 587 aaPredicted RBP18.41■□□□□ 0.54
LINC00115-201ENST00000473798 BCL9O00512 1426 aa18.41■□□□□ 0.54
LINC00115-201ENST00000473798 ITGB4P16144 1822 aa18.4■□□□□ 0.54
LINC00115-201ENST00000473798 PTF1AQ7RTS3 328 aa18.4■□□□□ 0.54
LINC00115-201ENST00000473798 SSH1Q8WYL5 1049 aa18.4■□□□□ 0.54
LINC00115-201ENST00000473798 PRAMEF22A3QJZ6 481 aa18.39■□□□□ 0.53
LINC00115-201ENST00000473798 PTCD1O75127 700 aaKnown RBP18.39■□□□□ 0.53
LINC00115-201ENST00000473798 ATG3Q9NT62 314 aa18.39■□□□□ 0.53
LINC00115-201ENST00000473798 SMC4Q9NTJ3 1288 aa18.39■□□□□ 0.53
LINC00115-201ENST00000473798 BRWD3Q6RI45 1802 aa18.39■□□□□ 0.53
LINC00115-201ENST00000473798 RGS12O14924 1447 aa18.38■□□□□ 0.53
LINC00115-201ENST00000473798 PLIN1O60240 522 aa18.38■□□□□ 0.53
LINC00115-201ENST00000473798 GIGYF1O75420 1035 aaPredicted RBP18.37■□□□□ 0.53
LINC00115-201ENST00000473798 EIF2S2P20042 333 aaKnown RBP18.37■□□□□ 0.53
LINC00115-201ENST00000473798 IRX6P78412 446 aaPredicted RBP18.37■□□□□ 0.53
LINC00115-201ENST00000473798 FMNL2Q96PY5 1086 aa18.37■□□□□ 0.53
LINC00115-201ENST00000473798 HEG1Q9ULI3 1381 aa18.36■□□□□ 0.53
LINC00115-201ENST00000473798 RRP1P56182 461 aaKnown RBP18.36■□□□□ 0.53
LINC00115-201ENST00000473798 RBM42Q9BTD8 480 aaKnown RBP18.36■□□□□ 0.53
LINC00115-201ENST00000473798 PAPPAQ13219 1627 aa18.35■□□□□ 0.53
LINC00115-201ENST00000473798 KCPQ6ZWJ8 1503 aa18.35■□□□□ 0.53
LINC00115-201ENST00000473798 NPM3O75607 178 aaKnown RBP18.35■□□□□ 0.53
LINC00115-201ENST00000473798 HDGFL1Q5TGJ6 251 aa18.35■□□□□ 0.53
LINC00115-201ENST00000473798 FRAT1Q92837 279 aaPredicted RBP18.35■□□□□ 0.53
LINC00115-201ENST00000473798 HOXD11P31277 338 aaPredicted RBP18.34■□□□□ 0.53
LINC00115-201ENST00000473798 ALDH1L2Q3SY69 923 aa18.34■□□□□ 0.53
LINC00115-201ENST00000473798 MRPL50Q8N5N7 158 aaKnown RBP18.34■□□□□ 0.53
LINC00115-201ENST00000473798 RNF123Q5XPI4 1314 aa18.33■□□□□ 0.53
LINC00115-201ENST00000473798 SNRPA1P09661 255 aaKnown RBP18.33■□□□□ 0.53
LINC00115-201ENST00000473798 FAM196AQ6ZSG2 479 aa18.33■□□□□ 0.53
LINC00115-201ENST00000473798 ZNF428Q96B54 188 aa18.33■□□□□ 0.53
LINC00115-201ENST00000473798 HOXB7P09629 217 aa18.32■□□□□ 0.52
LINC00115-201ENST00000473798 CANXP27824 592 aaKnown RBP18.32■□□□□ 0.52
LINC00115-201ENST00000473798 CCDC30Q5VVM6 783 aa18.32■□□□□ 0.52
LINC00115-201ENST00000473798 SOS1Q07889 1333 aaPredicted RBP18.32■□□□□ 0.52
LINC00115-201ENST00000473798 NOB1Q9ULX3 412 aaKnown RBP18.31■□□□□ 0.52
LINC00115-201ENST00000473798 USP16Q9Y5T5 823 aa18.31■□□□□ 0.52
LINC00115-201ENST00000473798 C5P01031 1676 aa18.31■□□□□ 0.52
LINC00115-201ENST00000473798 UBR2Q8IWV8 1755 aa18.31■□□□□ 0.52
LINC00115-201ENST00000473798 ANXA1P04083 346 aa18.3■□□□□ 0.52
LINC00115-201ENST00000473798 SLC4A2P04920 1241 aa18.3■□□□□ 0.52
LINC00115-201ENST00000473798 SLC4A9Q96Q91 983 aa18.3■□□□□ 0.52
LINC00115-201ENST00000473798 STK31Q9BXU1 1019 aa18.3■□□□□ 0.52
LINC00115-201ENST00000473798 CHPF2Q9P2E5 772 aa18.3■□□□□ 0.52
LINC00115-201ENST00000473798 TNNQ9UQP3 1299 aa18.3■□□□□ 0.52
LINC00115-201ENST00000473798 NHSQ6T4R5 1651 aa18.3■□□□□ 0.52
LINC00115-201ENST00000473798 TRIM37O94972 964 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms