RNA–Protein interactions for RNA: ENST00000473552.1

DKC1-207, Transcript of dyskerin pseudouridine synthase 1, humanhuman

TSL 2

Gene DKC1, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-207ENST00000473552 KRTAP3-3Q9BYR6 98 aa13.18□□□□□ -0.3
DKC1-207ENST00000473552 KRTAP3-2Q9BYR7 98 aa13.18□□□□□ -0.3
DKC1-207ENST00000473552 POLKQ9UBT6 870 aa13.18□□□□□ -0.3
DKC1-207ENST00000473552 ARIH1Q9Y4X5 557 aaPredicted RBP13.18□□□□□ -0.3
DKC1-207ENST00000473552 EMILIN1Q9Y6C2 1016 aa13.18□□□□□ -0.3
DKC1-207ENST00000473552 COL3A1P02461 1466 aaPredicted RBP13.17□□□□□ -0.3
DKC1-207ENST00000473552 MAP3K19Q56UN5 1328 aa13.17□□□□□ -0.3
DKC1-207ENST00000473552 CCDC184Q52MB2 194 aa13.17□□□□□ -0.3
DKC1-207ENST00000473552 SPDYE16A6NNV3 312 aaPredicted RBP13.16□□□□□ -0.3
DKC1-207ENST00000473552 FBLN1P23142 703 aa13.16□□□□□ -0.3
DKC1-207ENST00000473552 PBX2P40425 430 aa13.16□□□□□ -0.3
DKC1-207ENST00000473552 AMPHP49418 695 aa13.16□□□□□ -0.3
DKC1-207ENST00000473552 FOSBP53539 338 aa13.16□□□□□ -0.3
DKC1-207ENST00000473552 ZBTB7CA1YPR0 619 aa13.15□□□□□ -0.3
DKC1-207ENST00000473552 WDR43Q15061 677 aaKnown RBP eCLIP13.15□□□□□ -0.3
DKC1-207ENST00000473552 PDIA6Q15084 440 aa13.15□□□□□ -0.3
DKC1-207ENST00000473552 CABLES1Q8TDN4 633 aa13.15□□□□□ -0.3
DKC1-207ENST00000473552 INSRP06213 1382 aa13.15□□□□□ -0.3
DKC1-207ENST00000473552 JCADQ9P266 1359 aa13.15□□□□□ -0.3
DKC1-207ENST00000473552 FAM208AQ9UK61 1670 aaKnown RBP13.15□□□□□ -0.31
DKC1-207ENST00000473552 RGPD5Q99666 1765 aa13.15□□□□□ -0.31
DKC1-207ENST00000473552 KCNV2Q8TDN2 545 aa13.14□□□□□ -0.31
DKC1-207ENST00000473552 CPDO75976 1380 aa13.14□□□□□ -0.31
DKC1-207ENST00000473552 BLMP54132 1417 aaPredicted RBP13.13□□□□□ -0.31
DKC1-207ENST00000473552 COL18A1P39060 1754 aa13.13□□□□□ -0.31
DKC1-207ENST00000473552 COL14A1Q05707 1796 aaKnown RBP13.13□□□□□ -0.31
DKC1-207ENST00000473552 DIAPH1O60610 1272 aaKnown RBP13.13□□□□□ -0.31
DKC1-207ENST00000473552 HOXC9P31274 260 aa13.13□□□□□ -0.31
DKC1-207ENST00000473552 ZC3H6P61129 1189 aaKnown RBP13.13□□□□□ -0.31
DKC1-207ENST00000473552 ARHGEF25Q86VW2 580 aa13.13□□□□□ -0.31
DKC1-207ENST00000473552 NUDCQ9Y266 331 aa13.13□□□□□ -0.31
DKC1-207ENST00000473552 LMO7Q8WWI1 1683 aa13.12□□□□□ -0.31
DKC1-207ENST00000473552 KIAA0232Q92628 1395 aa13.12□□□□□ -0.31
DKC1-207ENST00000473552 FAM9BQ8IZU0 186 aa13.12□□□□□ -0.31
DKC1-207ENST00000473552 ARHGEF1Q92888 912 aaKnown RBP13.12□□□□□ -0.31
DKC1-207ENST00000473552 AXIN2Q9Y2T1 843 aa13.12□□□□□ -0.31
DKC1-207ENST00000473552 PLCH1Q4KWH8 1693 aa13.12□□□□□ -0.31
DKC1-207ENST00000473552 RGPD1P0DJD0 1748 aa13.11□□□□□ -0.31
DKC1-207ENST00000473552 ARHGAP33O14559 1287 aa13.11□□□□□ -0.31
DKC1-207ENST00000473552 HSPA1LP34931 641 aa13.11□□□□□ -0.31
DKC1-207ENST00000473552 PNISRQ8TF01 805 aaKnown RBP13.11□□□□□ -0.31
DKC1-207ENST00000473552 IP6K1Q92551 441 aa13.11□□□□□ -0.31
DKC1-207ENST00000473552 ZDHHC16Q969W1 377 aa13.11□□□□□ -0.31
DKC1-207ENST00000473552 PRDM11Q9NQV5 511 aa13.11□□□□□ -0.31
DKC1-207ENST00000473552 PHF14O94880 888 aa13.1□□□□□ -0.31
DKC1-207ENST00000473552 VSIG10Q8N0Z9 540 aa13.1□□□□□ -0.31
DKC1-207ENST00000473552 SPATA31A6Q5VVP1 1343 aa13.1□□□□□ -0.31
DKC1-207ENST00000473552 U2SURPO15042 1029 aaKnown RBP13.09□□□□□ -0.31
DKC1-207ENST00000473552 PTGER2P43116 358 aa13.09□□□□□ -0.31
DKC1-207ENST00000473552 HSP90AB2PQ58FF8 381 aa13.09□□□□□ -0.31
DKC1-207ENST00000473552 POTEEQ6S8J3 1075 aa13.09□□□□□ -0.31
DKC1-207ENST00000473552 DDX12PQ92771 950 aa13.09□□□□□ -0.31
DKC1-207ENST00000473552 PCDHGA10Q9Y5H3 936 aa13.09□□□□□ -0.31
DKC1-207ENST00000473552 RGPD2P0DJD1 1756 aa13.09□□□□□ -0.31
DKC1-207ENST00000473552 CAMTA1Q9Y6Y1 1673 aa13.08□□□□□ -0.31
DKC1-207ENST00000473552 IL13P35225 146 aa13.08□□□□□ -0.32
DKC1-207ENST00000473552 LSM11P83369 360 aaKnown RBP eCLIP13.08□□□□□ -0.32
DKC1-207ENST00000473552 EIF4A2Q14240 407 aaKnown RBP13.08□□□□□ -0.32
DKC1-207ENST00000473552 ANKRD13DQ6ZTN6 518 aa13.08□□□□□ -0.32
DKC1-207ENST00000473552 KCNK17Q96T54 332 aa13.08□□□□□ -0.32
DKC1-207ENST00000473552 BCL2L12Q9HB09 334 aa13.08□□□□□ -0.32
DKC1-207ENST00000473552 PLSCR2Q9NRY7 297 aa13.08□□□□□ -0.32
DKC1-207ENST00000473552 NWD2Q9ULI1 1742 aa13.08□□□□□ -0.32
DKC1-207ENST00000473552 NUTM2BA6NNL0 878 aaPredicted RBP13.07□□□□□ -0.32
DKC1-207ENST00000473552 NUTM2EB1AL46 878 aaPredicted RBP13.07□□□□□ -0.32
DKC1-207ENST00000473552 U2AF1L5P0DN76 240 aaPredicted RBP13.07□□□□□ -0.32
DKC1-207ENST00000473552 U2AF1Q01081 240 aaKnown RBP eCLIP13.07□□□□□ -0.325e-13■■■■■ 27.1
DKC1-207ENST00000473552 CHRNA2Q15822 529 aa13.07□□□□□ -0.32
DKC1-207ENST00000473552 TYW1BQ6NUM6 668 aa13.07□□□□□ -0.32
DKC1-207ENST00000473552 NUTM2AQ8IVF1 878 aaPredicted RBP13.07□□□□□ -0.32
DKC1-207ENST00000473552 FBXW7Q969H0 707 aa13.07□□□□□ -0.32
DKC1-207ENST00000473552 NRAPQ86VF7 1730 aa13.06□□□□□ -0.32
DKC1-207ENST00000473552 ANKRD24Q8TF21 1146 aa13.06□□□□□ -0.32
DKC1-207ENST00000473552 FBXO41Q8TF61 875 aa13.06□□□□□ -0.32
DKC1-207ENST00000473552 LTV1Q96GA3 475 aaPredicted RBP13.06□□□□□ -0.32
DKC1-207ENST00000473552 EPAS1Q99814 870 aa13.06□□□□□ -0.32
DKC1-207ENST00000473552 COL5A2P05997 1499 aaPredicted RBP13.05□□□□□ -0.32
DKC1-207ENST00000473552 PTPREP23469 700 aa13.05□□□□□ -0.32
DKC1-207ENST00000473552 PSEN2P49810 448 aa13.05□□□□□ -0.32
DKC1-207ENST00000473552 ADAM33Q9BZ11 813 aa13.05□□□□□ -0.32
DKC1-207ENST00000473552 ADAMTS8Q9UP79 889 aa13.05□□□□□ -0.32
DKC1-207ENST00000473552 LRP6O75581 1613 aa13.04□□□□□ -0.32
DKC1-207ENST00000473552 ADAMTS2O95450 1211 aa13.04□□□□□ -0.32
DKC1-207ENST00000473552 CSB-PGBD3P0DP91 1061 aa13.04□□□□□ -0.32
DKC1-207ENST00000473552 SPNS2Q8IVW8 549 aa13.04□□□□□ -0.32
DKC1-207ENST00000473552 PNNQ9H307 717 aaKnown RBP13.04□□□□□ -0.32
DKC1-207ENST00000473552 IGSF1Q8N6C5 1336 aa13.04□□□□□ -0.32
DKC1-207ENST00000473552 NEFMP07197 916 aa13.03□□□□□ -0.32
DKC1-207ENST00000473552 YTHDC1Q96MU7 727 aaKnown RBP13.03□□□□□ -0.32
DKC1-207ENST00000473552 MAPK8IP3Q9UPT6 1336 aa13.03□□□□□ -0.32
DKC1-207ENST00000473552 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.02□□□□□ -0.32
DKC1-207ENST00000473552 FAM83GA6ND36 823 aa13.02□□□□□ -0.33
DKC1-207ENST00000473552 GRXCR2A6NFK2 248 aa13.02□□□□□ -0.33
DKC1-207ENST00000473552 FCHSD2O94868 740 aa13.02□□□□□ -0.33
DKC1-207ENST00000473552 NBR1Q14596 966 aa13.02□□□□□ -0.33
DKC1-207ENST00000473552 MEX3CQ5U5Q3 659 aaKnown RBP13.02□□□□□ -0.33
DKC1-207ENST00000473552 EYA1Q99502 592 aa13.02□□□□□ -0.33
DKC1-207ENST00000473552 PARP4Q9UKK3 1724 aaKnown RBP13.02□□□□□ -0.33
DKC1-207ENST00000473552 HMOX1P09601 288 aa13.01□□□□□ -0.33
DKC1-207ENST00000473552 SULT6B1Q6IMI4 303 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms