RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 COL26A1Q96A83 441 aa10.93□□□□□ -0.66
SEC22A-204ENST00000473494 ARHGEF10LQ9HCE6 1279 aa10.93□□□□□ -0.66
SEC22A-204ENST00000473494 EGFL7Q9UHF1 273 aa10.93□□□□□ -0.66
SEC22A-204ENST00000473494 LGR5O75473 907 aa10.92□□□□□ -0.66
SEC22A-204ENST00000473494 FOXK2Q01167 660 aa10.92□□□□□ -0.66
SEC22A-204ENST00000473494 Q6ZVU0 165 aa10.92□□□□□ -0.66
SEC22A-204ENST00000473494 TOR4AQ9NXH8 423 aa10.92□□□□□ -0.66
SEC22A-204ENST00000473494 IL2RAP01589 272 aa10.91□□□□□ -0.66
SEC22A-204ENST00000473494 TNS4Q8IZW8 715 aa10.91□□□□□ -0.66
SEC22A-204ENST00000473494 KDF1Q8NAX2 398 aaPredicted RBP10.91□□□□□ -0.66
SEC22A-204ENST00000473494 GAS2L2Q8NHY3 880 aa10.91□□□□□ -0.66
SEC22A-204ENST00000473494 ITPKCQ96DU7 683 aa10.91□□□□□ -0.66
SEC22A-204ENST00000473494 RAB6BQ9NRW1 208 aa10.91□□□□□ -0.66
SEC22A-204ENST00000473494 HRH3Q9Y5N1 445 aa10.91□□□□□ -0.66
SEC22A-204ENST00000473494 C21orf2O43822 256 aa10.9□□□□□ -0.66
SEC22A-204ENST00000473494 PRR20EP86478 221 aa10.9□□□□□ -0.66
SEC22A-204ENST00000473494 PRR20CP86479 221 aa10.9□□□□□ -0.66
SEC22A-204ENST00000473494 PRR20DP86480 221 aa10.9□□□□□ -0.66
SEC22A-204ENST00000473494 PRR20BP86481 221 aa10.9□□□□□ -0.66
SEC22A-204ENST00000473494 PRR20AP86496 221 aa10.9□□□□□ -0.66
SEC22A-204ENST00000473494 PURBQ96QR8 312 aaKnown RBP10.9□□□□□ -0.66
SEC22A-204ENST00000473494 TSPAN10Q9H1Z9 355 aaPredicted RBP10.9□□□□□ -0.66
SEC22A-204ENST00000473494 SCHIP1Q9P0W5 487 aaPredicted RBP10.9□□□□□ -0.66
SEC22A-204ENST00000473494 SERTAD1Q9UHV2 236 aa10.9□□□□□ -0.66
SEC22A-204ENST00000473494 J3QL48 77 aa10.89□□□□□ -0.67
SEC22A-204ENST00000473494 PTCD1O75127 700 aaKnown RBP10.89□□□□□ -0.67
SEC22A-204ENST00000473494 ZIC2O95409 532 aaPredicted RBP10.89□□□□□ -0.67
SEC22A-204ENST00000473494 TIMP2P16035 220 aa10.89□□□□□ -0.67
SEC22A-204ENST00000473494 CLN3Q13286 438 aa10.89□□□□□ -0.67
SEC22A-204ENST00000473494 TRIM67Q6ZTA4 783 aa10.89□□□□□ -0.67
SEC22A-204ENST00000473494 XAGE2Q96GT9 111 aa10.89□□□□□ -0.67
SEC22A-204ENST00000473494 A6NJY4 79 aa10.88□□□□□ -0.67
SEC22A-204ENST00000473494 CBLBQ13191 982 aa10.88□□□□□ -0.67
SEC22A-204ENST00000473494 CYP4X1Q8N118 509 aa10.88□□□□□ -0.67
SEC22A-204ENST00000473494 SCG3Q8WXD2 468 aaKnown RBP10.88□□□□□ -0.67
SEC22A-204ENST00000473494 ESYT1Q9BSJ8 1104 aa10.88□□□□□ -0.67
SEC22A-204ENST00000473494 MKNK1Q9BUB5 465 aa10.88□□□□□ -0.67
SEC22A-204ENST00000473494 TTC24A2A3L6 582 aaPredicted RBP10.87□□□□□ -0.67
SEC22A-204ENST00000473494 TNFRSF10AO00220 468 aa10.87□□□□□ -0.67
SEC22A-204ENST00000473494 SMPD1P17405 629 aa10.87□□□□□ -0.67
SEC22A-204ENST00000473494 SMTNP53814 917 aa10.87□□□□□ -0.67
SEC22A-204ENST00000473494 WDR4P57081 412 aaKnown RBP10.87□□□□□ -0.67
SEC22A-204ENST00000473494 SLC9A9Q8IVB4 645 aa10.87□□□□□ -0.67
SEC22A-204ENST00000473494 STAG2Q8N3U4 1231 aa10.87□□□□□ -0.67
SEC22A-204ENST00000473494 ZFAND3Q9H8U3 227 aa10.87□□□□□ -0.67
SEC22A-204ENST00000473494 IQSEC3Q9UPP2 1182 aaPredicted RBP10.87□□□□□ -0.67
SEC22A-204ENST00000473494 ATAD2Q6PL18 1390 aa10.87□□□□□ -0.67
SEC22A-204ENST00000473494 TLR1Q15399 786 aa10.86□□□□□ -0.67
SEC22A-204ENST00000473494 POTEAQ6S8J7 498 aa10.86□□□□□ -0.67
SEC22A-204ENST00000473494 MEIOBQ8N635 442 aa10.86□□□□□ -0.67
SEC22A-204ENST00000473494 CNKSR1Q969H4 720 aa10.86□□□□□ -0.67
SEC22A-204ENST00000473494 SEPT3Q9UH03 358 aa10.86□□□□□ -0.67
SEC22A-204ENST00000473494 PTGIRP43119 386 aa10.85□□□□□ -0.67
SEC22A-204ENST00000473494 NBPF15Q8N660 670 aa10.85□□□□□ -0.67
SEC22A-204ENST00000473494 FHDC1Q9C0D6 1143 aaPredicted RBP10.85□□□□□ -0.67
SEC22A-204ENST00000473494 A0A1W2PRU2 124 aa10.84□□□□□ -0.67
SEC22A-204ENST00000473494 H3BRB1 525 aa10.84□□□□□ -0.67
SEC22A-204ENST00000473494 ICMTO60725 284 aa10.84□□□□□ -0.67
SEC22A-204ENST00000473494 PSMA6P60900 246 aaKnown RBP10.84□□□□□ -0.67
SEC22A-204ENST00000473494 ZNF211Q13398 564 aaPredicted RBP10.84□□□□□ -0.67
SEC22A-204ENST00000473494 CAPN12Q6ZSI9 719 aa10.84□□□□□ -0.67
SEC22A-204ENST00000473494 TUT1Q9H6E5 874 aaKnown RBP10.84□□□□□ -0.67
SEC22A-204ENST00000473494 PPP1R12BO60237 982 aaPredicted RBP10.83□□□□□ -0.68
SEC22A-204ENST00000473494 ZNF295-AS1Q8N0V1 137 aa10.83□□□□□ -0.68
SEC22A-204ENST00000473494 GTF3C2Q8WUA4 911 aaPredicted RBP10.83□□□□□ -0.68
SEC22A-204ENST00000473494 C2orf49Q9BVC5 232 aaPredicted RBP10.83□□□□□ -0.68
SEC22A-204ENST00000473494 USP3Q9Y6I4 520 aa10.83□□□□□ -0.68
SEC22A-204ENST00000473494 DNMT3AQ9Y6K1 912 aaPredicted RBP10.83□□□□□ -0.68
SEC22A-204ENST00000473494 CDK2AP1O14519 115 aa10.82□□□□□ -0.68
SEC22A-204ENST00000473494 ABL1P00519 1130 aa10.82□□□□□ -0.68
SEC22A-204ENST00000473494 SF3B2Q13435 895 aaKnown RBP10.82□□□□□ -0.68
SEC22A-204ENST00000473494 HELQQ8TDG4 1101 aa10.82□□□□□ -0.68
SEC22A-204ENST00000473494 HIRAP54198 1017 aaPredicted RBP10.81□□□□□ -0.68
SEC22A-204ENST00000473494 AGBL1Q96MI9 1066 aa10.81□□□□□ -0.68
SEC22A-204ENST00000473494 RELBQ01201 579 aa10.8□□□□□ -0.68
SEC22A-204ENST00000473494 TBCELQ5QJ74 424 aa10.8□□□□□ -0.68
SEC22A-204ENST00000473494 DNAJC14Q6Y2X3 702 aaPredicted RBP10.8□□□□□ -0.68
SEC22A-204ENST00000473494 NPM2Q86SE8 214 aaKnown RBP10.8□□□□□ -0.68
SEC22A-204ENST00000473494 GLYCTKQ8IVS8 523 aa10.8□□□□□ -0.68
SEC22A-204ENST00000473494 HPS1Q92902 700 aa10.79□□□□□ -0.68
SEC22A-204ENST00000473494 VTI1AQ96AJ9 217 aa10.79□□□□□ -0.68
SEC22A-204ENST00000473494 MEN1O00255 615 aa10.78□□□□□ -0.68
SEC22A-204ENST00000473494 EML1O00423 815 aa10.78□□□□□ -0.68
SEC22A-204ENST00000473494 FKBP4Q02790 459 aaKnown RBP eCLIP10.78□□□□□ -0.68
SEC22A-204ENST00000473494 CENPCQ03188 943 aa10.78□□□□□ -0.68
SEC22A-204ENST00000473494 ECM1Q16610 540 aa10.78□□□□□ -0.68
SEC22A-204ENST00000473494 CHMP7Q8WUX9 453 aaPredicted RBP10.78□□□□□ -0.68
SEC22A-204ENST00000473494 MYO19Q96H55 970 aa10.78□□□□□ -0.68
SEC22A-204ENST00000473494 RGS20O76081 388 aa10.77□□□□□ -0.69
SEC22A-204ENST00000473494 NPR3P17342 541 aa10.77□□□□□ -0.69
SEC22A-204ENST00000473494 GPC1P35052 558 aa10.77□□□□□ -0.69
SEC22A-204ENST00000473494 TEAD4Q15561 434 aa10.77□□□□□ -0.69
SEC22A-204ENST00000473494 C16orf46Q6P387 395 aa10.77□□□□□ -0.69
SEC22A-204ENST00000473494 PPARGC1BQ86YN6 1023 aaKnown RBP10.77□□□□□ -0.69
SEC22A-204ENST00000473494 ZDHHC1Q8WTX9 485 aa10.77□□□□□ -0.69
SEC22A-204ENST00000473494 NLRP3Q96P20 1036 aa10.77□□□□□ -0.69
SEC22A-204ENST00000473494 ANO2Q9NQ90 1003 aa10.77□□□□□ -0.69
SEC22A-204ENST00000473494 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.77□□□□□ -0.693e-23■■■■■ 559
SEC22A-204ENST00000473494 BIN2Q9UBW5 565 aaPredicted RBP10.77□□□□□ -0.69
SEC22A-204ENST00000473494 AMOTL2Q9Y2J4 779 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms