RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 FAM182BQ5T319 152 aa16.38■□□□□ 0.21
TRAPPC12-217ENST00000473348 ERVV-2B6SEH9 535 aa16.37■□□□□ 0.21
TRAPPC12-217ENST00000473348 SLC52A2Q9HAB3 445 aa16.37■□□□□ 0.21
TRAPPC12-217ENST00000473348 LAS1LQ9Y4W2 734 aaKnown RBP16.37■□□□□ 0.21
TRAPPC12-217ENST00000473348 LY75O60449 1722 aa16.36■□□□□ 0.21
TRAPPC12-217ENST00000473348 CABP4P57796 275 aa16.36■□□□□ 0.21
TRAPPC12-217ENST00000473348 CDCA7LQ96GN5 454 aa16.36■□□□□ 0.21
TRAPPC12-217ENST00000473348 SPINK5Q9NQ38 1064 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC12-217ENST00000473348 IFT57Q9NWB7 429 aa16.36■□□□□ 0.21
TRAPPC12-217ENST00000473348 GNAI1P63096 354 aa16.35■□□□□ 0.21
TRAPPC12-217ENST00000473348 TAF7Q15545 349 aaPredicted RBP16.35■□□□□ 0.21
TRAPPC12-217ENST00000473348 ACSBG1Q96GR2 724 aa16.35■□□□□ 0.21
TRAPPC12-217ENST00000473348 CFAP44Q96MT7 982 aa16.35■□□□□ 0.21
TRAPPC12-217ENST00000473348 TMOD3Q9NYL9 352 aa16.35■□□□□ 0.21
TRAPPC12-217ENST00000473348 E9PSI1 815 aa16.34■□□□□ 0.21
TRAPPC12-217ENST00000473348 ZNF853P0CG23 659 aa16.34■□□□□ 0.21
TRAPPC12-217ENST00000473348 SLFN5Q08AF3 891 aa16.34■□□□□ 0.21
TRAPPC12-217ENST00000473348 NFATC2IPQ8NCF5 419 aa16.34■□□□□ 0.21
TRAPPC12-217ENST00000473348 SYTL4Q96C24 671 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC12-217ENST00000473348 FANCIQ9NVI1 1328 aa16.34■□□□□ 0.21
TRAPPC12-217ENST00000473348 PRIM1P49642 420 aaKnown RBP16.33■□□□□ 0.2
TRAPPC12-217ENST00000473348 FAM196AQ6ZSG2 479 aa16.33■□□□□ 0.2
TRAPPC12-217ENST00000473348 TSR2Q969E8 191 aaKnown RBP16.33■□□□□ 0.2
TRAPPC12-217ENST00000473348 MYH16Q9H6N6 1097 aa16.33■□□□□ 0.2
TRAPPC12-217ENST00000473348 TSPYL4Q9UJ04 414 aa16.33■□□□□ 0.2
TRAPPC12-217ENST00000473348 KCPQ6ZWJ8 1503 aa16.33■□□□□ 0.2
TRAPPC12-217ENST00000473348 CICQ96RK0 1608 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC12-217ENST00000473348 ZNF831Q5JPB2 1677 aa16.33■□□□□ 0.2
TRAPPC12-217ENST00000473348 TJP1Q07157 1748 aa16.33■□□□□ 0.2
TRAPPC12-217ENST00000473348 RGPD3A6NKT7 1758 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC12-217ENST00000473348 RGPD4Q7Z3J3 1758 aa16.33■□□□□ 0.2
TRAPPC12-217ENST00000473348 CACNA1FO60840 1977 aa16.33■□□□□ 0.2
TRAPPC12-217ENST00000473348 BTBD11A6QL63 1104 aa16.32■□□□□ 0.2
TRAPPC12-217ENST00000473348 CHL1O00533 1208 aa16.32■□□□□ 0.2
TRAPPC12-217ENST00000473348 TAF1LQ8IZX4 1826 aa16.32■□□□□ 0.2
TRAPPC12-217ENST00000473348 MBIPQ9NS73 344 aa16.32■□□□□ 0.2
TRAPPC12-217ENST00000473348 BABAM1Q9NWV8 329 aa16.32■□□□□ 0.2
TRAPPC12-217ENST00000473348 MIS18AQ9NYP9 233 aa16.32■□□□□ 0.2
TRAPPC12-217ENST00000473348 COL5A3P25940 1745 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC12-217ENST00000473348 PIGBQ92521 554 aa16.31■□□□□ 0.2
TRAPPC12-217ENST00000473348 KCNQ2O43526 872 aa16.3■□□□□ 0.2
TRAPPC12-217ENST00000473348 TRMT2AQ8IZ69 625 aaKnown RBP16.3■□□□□ 0.2
TRAPPC12-217ENST00000473348 EP400Q96L91 3159 aa16.29■□□□□ 0.2
TRAPPC12-217ENST00000473348 SLC39A6Q13433 755 aa16.29■□□□□ 0.2
TRAPPC12-217ENST00000473348 DUSP27Q5VZP5 1158 aa16.29■□□□□ 0.2
TRAPPC12-217ENST00000473348 KCNQ3O43525 872 aa16.28■□□□□ 0.2
TRAPPC12-217ENST00000473348 ZNF790Q6PG37 636 aa16.28■□□□□ 0.2
TRAPPC12-217ENST00000473348 TTC5Q8N0Z6 440 aa16.28■□□□□ 0.2
TRAPPC12-217ENST00000473348 PTF1AQ7RTS3 328 aa16.27■□□□□ 0.2
TRAPPC12-217ENST00000473348 ATG3Q9NT62 314 aa16.27■□□□□ 0.2
TRAPPC12-217ENST00000473348 ASAP1Q9ULH1 1129 aa16.27■□□□□ 0.2
TRAPPC12-217ENST00000473348 EXOSC9Q06265 439 aaKnown RBP16.26■□□□□ 0.19
TRAPPC12-217ENST00000473348 BCL11BQ9C0K0 894 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC12-217ENST00000473348 TRIM37O94972 964 aa16.25■□□□□ 0.19
TRAPPC12-217ENST00000473348 EIF4A1P60842 406 aaKnown RBP16.25■□□□□ 0.19
TRAPPC12-217ENST00000473348 PALLDQ8WX93 1383 aa16.25■□□□□ 0.19
TRAPPC12-217ENST00000473348 KRT24Q2M2I5 525 aa16.24■□□□□ 0.19
TRAPPC12-217ENST00000473348 ZNF496Q96IT1 587 aaPredicted RBP16.24■□□□□ 0.19
TRAPPC12-217ENST00000473348 FMNL2Q96PY5 1086 aa16.24■□□□□ 0.19
TRAPPC12-217ENST00000473348 HEG1Q9ULI3 1381 aa16.24■□□□□ 0.19
TRAPPC12-217ENST00000473348 RREB1Q92766 1687 aa16.24■□□□□ 0.19
TRAPPC12-217ENST00000473348 C8orf58Q8NAV2 365 aa16.23■□□□□ 0.19
TRAPPC12-217ENST00000473348 SMARCC1Q92922 1105 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC12-217ENST00000473348 MYH14Q7Z406 1995 aaKnown RBP16.22■□□□□ 0.19
TRAPPC12-217ENST00000473348 PTCD1O75127 700 aaKnown RBP16.22■□□□□ 0.19
TRAPPC12-217ENST00000473348 ELL2O00472 640 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC12-217ENST00000473348 TWISTNBQ3B726 338 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC12-217ENST00000473348 TSPYL6Q8N831 410 aa16.21■□□□□ 0.19
TRAPPC12-217ENST00000473348 RBM42Q9BTD8 480 aaKnown RBP16.21■□□□□ 0.19
TRAPPC12-217ENST00000473348 NUP188Q5SRE5 1749 aa16.2■□□□□ 0.18
TRAPPC12-217ENST00000473348 SOS1Q07889 1333 aaPredicted RBP16.19■□□□□ 0.18
TRAPPC12-217ENST00000473348 C4BP0C0L5 1744 aa16.19■□□□□ 0.18
TRAPPC12-217ENST00000473348 GIGYF1O75420 1035 aaPredicted RBP16.19■□□□□ 0.18
TRAPPC12-217ENST00000473348 CENPBP07199 599 aaPredicted RBP16.19■□□□□ 0.18
TRAPPC12-217ENST00000473348 HOXB7P09629 217 aa16.19■□□□□ 0.18
TRAPPC12-217ENST00000473348 TUBGCP6Q96RT7 1819 aa16.19■□□□□ 0.18
TRAPPC12-217ENST00000473348 LOC102724428A0A0B4J2F2 783 aa16.18■□□□□ 0.18
TRAPPC12-217ENST00000473348 PRAMEF22A3QJZ6 481 aa16.18■□□□□ 0.18
TRAPPC12-217ENST00000473348 SNRPA1P09661 255 aaKnown RBP16.18■□□□□ 0.18
TRAPPC12-217ENST00000473348 CT47B1P0C2W7 299 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC12-217ENST00000473348 SIK1P57059 783 aa16.18■□□□□ 0.18
TRAPPC12-217ENST00000473348 VSIG10Q8N0Z9 540 aa16.18■□□□□ 0.18
TRAPPC12-217ENST00000473348 SLC4A9Q96Q91 983 aa16.18■□□□□ 0.18
TRAPPC12-217ENST00000473348 UBR3Q6ZT12 1888 aa16.18■□□□□ 0.18
TRAPPC12-217ENST00000473348 VAMP4O75379 141 aa16.17■□□□□ 0.18
TRAPPC12-217ENST00000473348 APBA3O96018 575 aa16.16■□□□□ 0.18
TRAPPC12-217ENST00000473348 HDGFL1Q5TGJ6 251 aa16.16■□□□□ 0.18
TRAPPC12-217ENST00000473348 DNAJC10Q8IXB1 793 aa16.16■□□□□ 0.18
TRAPPC12-217ENST00000473348 N4BP2Q86UW6 1770 aaPredicted RBP16.15■□□□□ 0.18
TRAPPC12-217ENST00000473348 C4AP0C0L4 1744 aa16.15■□□□□ 0.18
TRAPPC12-217ENST00000473348 ATP6V1AP38606 617 aa16.15■□□□□ 0.18
TRAPPC12-217ENST00000473348 CCNL1Q9UK58 526 aaPredicted RBP16.15■□□□□ 0.18
TRAPPC12-217ENST00000473348 ARFGEF2Q9Y6D5 1785 aa16.15■□□□□ 0.18
TRAPPC12-217ENST00000473348 EIF2S2P20042 333 aaKnown RBP16.14■□□□□ 0.17
TRAPPC12-217ENST00000473348 NECTIN2Q92692 538 aa16.14■□□□□ 0.17
TRAPPC12-217ENST00000473348 ZNF428Q96B54 188 aa16.14■□□□□ 0.17
TRAPPC12-217ENST00000473348 TEX13AQ9BXU3 409 aaPredicted RBP16.14■□□□□ 0.17
TRAPPC12-217ENST00000473348 RCAN3Q9UKA8 241 aa16.14■□□□□ 0.17
TRAPPC12-217ENST00000473348 USP16Q9Y5T5 823 aa16.14■□□□□ 0.17
TRAPPC12-217ENST00000473348 QSER1Q2KHR3 1735 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms