RNA–Protein interactions for RNA: ENST00000473171.5

LSAMP-202, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-202ENST00000473171 PBX2P40425 430 aa11.36□□□□□ -0.59
LSAMP-202ENST00000473171 E2F4Q16254 413 aa11.36□□□□□ -0.59
LSAMP-202ENST00000473171 ZNF454Q8N9F8 522 aa11.36□□□□□ -0.59
LSAMP-202ENST00000473171 MYOM1P52179 1685 aa11.36□□□□□ -0.59
LSAMP-202ENST00000473171 LMO7Q8WWI1 1683 aa11.36□□□□□ -0.59
LSAMP-202ENST00000473171 C11orf95C9JLR9 678 aaPredicted RBP11.35□□□□□ -0.59
LSAMP-202ENST00000473171 DPYSL4O14531 572 aa11.35□□□□□ -0.59
LSAMP-202ENST00000473171 TOM1L2Q6ZVM7 507 aa11.35□□□□□ -0.59
LSAMP-202ENST00000473171 NLRP13Q86W25 1043 aa11.35□□□□□ -0.59
LSAMP-202ENST00000473171 STK32BQ9NY57 414 aa11.35□□□□□ -0.59
LSAMP-202ENST00000473171 CASZ1Q86V15 1759 aa11.34□□□□□ -0.59
LSAMP-202ENST00000473171 TXNRD1Q16881 649 aa11.34□□□□□ -0.59
LSAMP-202ENST00000473171 SPNS2Q8IVW8 549 aa11.34□□□□□ -0.59
LSAMP-202ENST00000473171 MARCH10Q8NA82 808 aaPredicted RBP11.34□□□□□ -0.59
LSAMP-202ENST00000473171 AXIN2Q9Y2T1 843 aa11.34□□□□□ -0.59
LSAMP-202ENST00000473171 UTRNP46939 3433 aa11.34□□□□□ -0.59
LSAMP-202ENST00000473171 PARP4Q9UKK3 1724 aaKnown RBP11.33□□□□□ -0.6
LSAMP-202ENST00000473171 PLEKHG3A1L390 1219 aa11.33□□□□□ -0.6
LSAMP-202ENST00000473171 IFFO2Q5TF58 517 aa11.33□□□□□ -0.6
LSAMP-202ENST00000473171 ANKRD13DQ6ZTN6 518 aa11.33□□□□□ -0.6
LSAMP-202ENST00000473171 PEAK1Q9H792 1746 aa11.32□□□□□ -0.6
LSAMP-202ENST00000473171 LRRC37A3O60309 1634 aa11.32□□□□□ -0.6
LSAMP-202ENST00000473171 SLC15A2Q16348 729 aa11.32□□□□□ -0.6
LSAMP-202ENST00000473171 MTFR1LQ9H019 292 aa11.32□□□□□ -0.6
LSAMP-202ENST00000473171 ARHGAP33O14559 1287 aa11.31□□□□□ -0.6
LSAMP-202ENST00000473171 SRPK2P78362 688 aaKnown RBP11.31□□□□□ -0.6
LSAMP-202ENST00000473171 ITSN1Q15811 1721 aa11.31□□□□□ -0.6
LSAMP-202ENST00000473171 AATKQ6ZMQ8 1374 aa11.3□□□□□ -0.6
LSAMP-202ENST00000473171 PPIP5K1Q6PFW1 1433 aa11.3□□□□□ -0.6
LSAMP-202ENST00000473171 LSM11P83369 360 aaKnown RBP eCLIP11.3□□□□□ -0.6
LSAMP-202ENST00000473171 ARXQ96QS3 562 aa11.3□□□□□ -0.6
LSAMP-202ENST00000473171 ARHGEF28Q8N1W1 1705 aaKnown RBP11.29□□□□□ -0.6
LSAMP-202ENST00000473171 GIGYF1O75420 1035 aaPredicted RBP11.29□□□□□ -0.6
LSAMP-202ENST00000473171 CSB-PGBD3P0DP91 1061 aa11.29□□□□□ -0.6
LSAMP-202ENST00000473171 FOSBP53539 338 aa11.29□□□□□ -0.6
LSAMP-202ENST00000473171 GPR162Q16538 588 aa11.29□□□□□ -0.6
LSAMP-202ENST00000473171 TOPAZ1Q8N9V7 1692 aa11.29□□□□□ -0.6
LSAMP-202ENST00000473171 WDR17Q8IZU2 1322 aa11.29□□□□□ -0.6
LSAMP-202ENST00000473171 RGPD3A6NKT7 1758 aaPredicted RBP11.28□□□□□ -0.6
LSAMP-202ENST00000473171 RGPD4Q7Z3J3 1758 aa11.28□□□□□ -0.6
LSAMP-202ENST00000473171 ACSBG1Q96GR2 724 aa11.28□□□□□ -0.6
LSAMP-202ENST00000473171 RAB3GAP2Q9H2M9 1393 aa11.28□□□□□ -0.6
LSAMP-202ENST00000473171 KCNK17Q96T54 332 aa11.27□□□□□ -0.61
LSAMP-202ENST00000473171 CABP1Q9NZU7 370 aa11.27□□□□□ -0.61
LSAMP-202ENST00000473171 BCL9O00512 1426 aa11.26□□□□□ -0.61
LSAMP-202ENST00000473171 USP6P35125 1406 aa11.26□□□□□ -0.61
LSAMP-202ENST00000473171 SLIT3O75094 1523 aa11.26□□□□□ -0.61
LSAMP-202ENST00000473171 PSEN2P49810 448 aa11.26□□□□□ -0.61
LSAMP-202ENST00000473171 MMRN1Q13201 1228 aa11.26□□□□□ -0.61
LSAMP-202ENST00000473171 ZNF827Q17R98 1081 aa11.26□□□□□ -0.61
LSAMP-202ENST00000473171 POTEEQ6S8J3 1075 aa11.26□□□□□ -0.61
LSAMP-202ENST00000473171 ZDHHC16Q969W1 377 aa11.26□□□□□ -0.61
LSAMP-202ENST00000473171 CDCA7Q9BWT1 371 aaPredicted RBP11.26□□□□□ -0.61
LSAMP-202ENST00000473171 CPSF1Q10570 1443 aaKnown RBP11.26□□□□□ -0.61
LSAMP-202ENST00000473171 EXOC5O00471 708 aa11.25□□□□□ -0.61
LSAMP-202ENST00000473171 NBPF1Q3BBV0 1214 aa11.25□□□□□ -0.61
LSAMP-202ENST00000473171 SPDYE16A6NNV3 312 aaPredicted RBP11.24□□□□□ -0.61
LSAMP-202ENST00000473171 STAC3Q96MF2 364 aa11.24□□□□□ -0.61
LSAMP-202ENST00000473171 CARD10Q9BWT7 1032 aa11.24□□□□□ -0.61
LSAMP-202ENST00000473171 MAP3K5Q99683 1374 aa11.24□□□□□ -0.61
LSAMP-202ENST00000473171 PHF14O94880 888 aa11.23□□□□□ -0.61
LSAMP-202ENST00000473171 PTPREP23469 700 aa11.23□□□□□ -0.61
LSAMP-202ENST00000473171 ARHGEF25Q86VW2 580 aa11.23□□□□□ -0.61
LSAMP-202ENST00000473171 BCL2L12Q9HB09 334 aa11.23□□□□□ -0.61
LSAMP-202ENST00000473171 CENPJQ9HC77 1338 aaPredicted RBP11.23□□□□□ -0.61
LSAMP-202ENST00000473171 TNS2Q63HR2 1409 aa11.23□□□□□ -0.61
LSAMP-202ENST00000473171 SBF2Q86WG5 1849 aa11.23□□□□□ -0.61
LSAMP-202ENST00000473171 BRD4O60885 1362 aaPredicted RBP11.22□□□□□ -0.61
LSAMP-202ENST00000473171 PDIA6Q15084 440 aa11.22□□□□□ -0.61
LSAMP-202ENST00000473171 NLGN2Q8NFZ4 835 aa11.22□□□□□ -0.61
LSAMP-202ENST00000473171 DDX12PQ92771 950 aa11.22□□□□□ -0.61
LSAMP-202ENST00000473171 LRRC4BQ9NT99 713 aa11.22□□□□□ -0.61
LSAMP-202ENST00000473171 PCDHGA10Q9Y5H3 936 aa11.22□□□□□ -0.61
LSAMP-202ENST00000473171 TYW1BQ6NUM6 668 aa11.21□□□□□ -0.61
LSAMP-202ENST00000473171 ADAM33Q9BZ11 813 aa11.21□□□□□ -0.61
LSAMP-202ENST00000473171 CCDC7Q96M83 1385 aa11.2□□□□□ -0.62
LSAMP-202ENST00000473171 TTC21BQ7Z4L5 1316 aa11.2□□□□□ -0.62
LSAMP-202ENST00000473171 POLD1P28340 1107 aa11.2□□□□□ -0.62
LSAMP-202ENST00000473171 KCNQ4P56696 695 aa11.2□□□□□ -0.62
LSAMP-202ENST00000473171 DMRTA1Q5VZB9 504 aa11.2□□□□□ -0.62
LSAMP-202ENST00000473171 FBXW7Q969H0 707 aa11.2□□□□□ -0.62
LSAMP-202ENST00000473171 PIK3C2AO00443 1686 aa11.2□□□□□ -0.62
LSAMP-202ENST00000473171 COL18A1P39060 1754 aa11.19□□□□□ -0.62
LSAMP-202ENST00000473171 ADGRD1Q6QNK2 874 aa11.19□□□□□ -0.62
LSAMP-202ENST00000473171 KCNH5Q8NCM2 988 aa11.19□□□□□ -0.62
LSAMP-202ENST00000473171 EPAS1Q99814 870 aa11.19□□□□□ -0.62
LSAMP-202ENST00000473171 NLRP2Q9NX02 1062 aa11.19□□□□□ -0.62
LSAMP-202ENST00000473171 ARIH1Q9Y4X5 557 aaPredicted RBP11.19□□□□□ -0.62
LSAMP-202ENST00000473171 PAPPAQ13219 1627 aa11.19□□□□□ -0.62
LSAMP-202ENST00000473171 WNK3Q9BYP7 1800 aa11.19□□□□□ -0.62
LSAMP-202ENST00000473171 PNPLA7Q6ZV29 1317 aa11.18□□□□□ -0.62
LSAMP-202ENST00000473171 YBX3P16989 372 aaKnown RBP eCLIP11.18□□□□□ -0.62
LSAMP-202ENST00000473171 AKAP12Q02952 1782 aa11.18□□□□□ -0.62
LSAMP-202ENST00000473171 CEP350Q5VT06 3117 aa11.18□□□□□ -0.62
LSAMP-202ENST00000473171 NHSQ6T4R5 1651 aa11.17□□□□□ -0.62
LSAMP-202ENST00000473171 IL2RBP14784 551 aa11.17□□□□□ -0.62
LSAMP-202ENST00000473171 TFCP2L1Q9NZI6 479 aa11.17□□□□□ -0.62
LSAMP-202ENST00000473171 GOLGB1Q14789 3259 aaKnown RBP11.17□□□□□ -0.62
LSAMP-202ENST00000473171 SHANK3Q9BYB0 1731 aa11.17□□□□□ -0.62
LSAMP-202ENST00000473171 ABCC6O95255 1503 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms