RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 TUBGCP6Q96RT7 1819 aa8.89□□□□□ -0.99
HDAC1-205ENST00000472928 ERBB3P21860 1342 aa8.88□□□□□ -0.99
HDAC1-205ENST00000472928 GRIN3BO60391 1043 aa8.88□□□□□ -0.99
HDAC1-205ENST00000472928 HSPA6P17066 643 aa8.88□□□□□ -0.99
HDAC1-205ENST00000472928 SLC27A3Q5K4L6 730 aa8.88□□□□□ -0.99
HDAC1-205ENST00000472928 HSPA5P11021 654 aaKnown RBP8.87□□□□□ -0.99
HDAC1-205ENST00000472928 IL2RBP14784 551 aa8.87□□□□□ -0.99
HDAC1-205ENST00000472928 TIE1P35590 1138 aa8.87□□□□□ -0.99
HDAC1-205ENST00000472928 KCNQ4P56696 695 aa8.87□□□□□ -0.99
HDAC1-205ENST00000472928 E2F4Q16254 413 aa8.87□□□□□ -0.99
HDAC1-205ENST00000472928 ARHGEF1Q92888 912 aaKnown RBP8.87□□□□□ -0.99
HDAC1-205ENST00000472928 TTC21AQ8NDW8 1320 aa8.86□□□□□ -0.99
HDAC1-205ENST00000472928 EIF4G2P78344 907 aaKnown RBP eCLIP8.86□□□□□ -0.992e-8■■■■■ 38.7
HDAC1-205ENST00000472928 MKRN3Q13064 507 aaKnown RBP8.86□□□□□ -0.99
HDAC1-205ENST00000472928 CARD11Q9BXL7 1154 aa8.86□□□□□ -0.99
HDAC1-205ENST00000472928 NLRP2Q9NX02 1062 aa8.86□□□□□ -0.99
HDAC1-205ENST00000472928 TFCP2L1Q9NZI6 479 aa8.86□□□□□ -0.99
HDAC1-205ENST00000472928 NSD2O96028 1365 aa8.86□□□□□ -0.99
HDAC1-205ENST00000472928 TTLL13PA6NNM8 815 aa8.85□□□□□ -0.99
HDAC1-205ENST00000472928 MFSD10Q14728 455 aa8.85□□□□□ -0.99
HDAC1-205ENST00000472928 CRISPLD2Q9H0B8 497 aa8.85□□□□□ -0.99
HDAC1-205ENST00000472928 GPBP1L1Q9HC44 474 aaPredicted RBP8.85□□□□□ -0.99
HDAC1-205ENST00000472928 USP31Q70CQ4 1352 aa8.85□□□□□ -0.99
HDAC1-205ENST00000472928 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.84□□□□□ -0.99
HDAC1-205ENST00000472928 COL23A1Q86Y22 540 aaPredicted RBP8.84□□□□□ -0.99
HDAC1-205ENST00000472928 LARP6Q9BRS8 491 aaKnown RBP8.84□□□□□ -0.99
HDAC1-205ENST00000472928 EVC2Q86UK5 1308 aa8.83□□□□□ -1
HDAC1-205ENST00000472928 PDE4AP27815 886 aa8.83□□□□□ -1
HDAC1-205ENST00000472928 MSL1Q68DK7 614 aa8.83□□□□□ -1
HDAC1-205ENST00000472928 ANKRD24Q8TF21 1146 aa8.83□□□□□ -1
HDAC1-205ENST00000472928 ZNF526Q8TF50 670 aaPredicted RBP8.83□□□□□ -1
HDAC1-205ENST00000472928 BMP2KQ9NSY1 1161 aaPredicted RBP8.83□□□□□ -1
HDAC1-205ENST00000472928 USP54Q70EL1 1684 aa8.83□□□□□ -1
HDAC1-205ENST00000472928 KTN1Q86UP2 1357 aaKnown RBP8.83□□□□□ -1
HDAC1-205ENST00000472928 LY75O60449 1722 aa8.83□□□□□ -1
HDAC1-205ENST00000472928 KIF3CO14782 793 aa8.82□□□□□ -1
HDAC1-205ENST00000472928 PRIM1P49642 420 aaKnown RBP8.82□□□□□ -1
HDAC1-205ENST00000472928 DIEXFQ68CQ4 756 aaKnown RBP8.82□□□□□ -1
HDAC1-205ENST00000472928 DDX54Q8TDD1 881 aaKnown RBP8.82□□□□□ -1
HDAC1-205ENST00000472928 CD2APQ9Y5K6 639 aa8.82□□□□□ -1
HDAC1-205ENST00000472928 ANKRD36BQ8N2N9 1353 aa8.82□□□□□ -1
HDAC1-205ENST00000472928 MON2Q7Z3U7 1717 aa8.81□□□□□ -1
HDAC1-205ENST00000472928 NME9Q86XW9 330 aa8.81□□□□□ -1
HDAC1-205ENST00000472928 CCNL1Q9UK58 526 aaPredicted RBP8.81□□□□□ -1
HDAC1-205ENST00000472928 SBNO2Q9Y2G9 1366 aa8.81□□□□□ -1
HDAC1-205ENST00000472928 CD163L1Q9NR16 1453 aa8.81□□□□□ -1
HDAC1-205ENST00000472928 DOT1LQ8TEK3 1739 aa8.8□□□□□ -1
HDAC1-205ENST00000472928 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.8□□□□□ -1
HDAC1-205ENST00000472928 DNAJC5GQ8N7S2 189 aa8.8□□□□□ -1
HDAC1-205ENST00000472928 SYTL4Q96C24 671 aaPredicted RBP8.8□□□□□ -1
HDAC1-205ENST00000472928 DDX27Q96GQ7 796 aaKnown RBP8.8□□□□□ -1
HDAC1-205ENST00000472928 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.8□□□□□ -13e-7■□□□□ 8.6
HDAC1-205ENST00000472928 LTN1O94822 1766 aa8.8□□□□□ -1
HDAC1-205ENST00000472928 PCNTO95613 3336 aa8.8□□□□□ -1
HDAC1-205ENST00000472928 GALR2O43603 387 aaPredicted RBP8.79□□□□□ -1
HDAC1-205ENST00000472928 ST20-MTHFSA0A0A6YYL1 179 aa8.78□□□□□ -1
HDAC1-205ENST00000472928 TESPA1A2RU30 521 aaPredicted RBP8.78□□□□□ -1
HDAC1-205ENST00000472928 TULP1O00294 542 aaPredicted RBP8.78□□□□□ -1
HDAC1-205ENST00000472928 SEMA3EO15041 775 aa8.78□□□□□ -1
HDAC1-205ENST00000472928 APLP1P51693 650 aa8.78□□□□□ -1
HDAC1-205ENST00000472928 AMIGO3Q86WK7 504 aa8.78□□□□□ -1
HDAC1-205ENST00000472928 IP6K1Q92551 441 aa8.78□□□□□ -1
HDAC1-205ENST00000472928 WWC3Q9ULE0 1092 aa8.78□□□□□ -1
HDAC1-205ENST00000472928 TRIM35Q9UPQ4 493 aa8.78□□□□□ -1
HDAC1-205ENST00000472928 ARIH1Q9Y4X5 557 aaPredicted RBP8.78□□□□□ -1
HDAC1-205ENST00000472928 MEGF6O75095 1541 aa8.78□□□□□ -1
HDAC1-205ENST00000472928 FAM208AQ9UK61 1670 aaKnown RBP8.78□□□□□ -1
HDAC1-205ENST00000472928 KIF7Q2M1P5 1343 aa8.78□□□□□ -1
HDAC1-205ENST00000472928 WASHC2AQ641Q2 1341 aa8.78□□□□□ -1
HDAC1-205ENST00000472928 IGSF1Q8N6C5 1336 aa8.78□□□□□ -1
HDAC1-205ENST00000472928 CAMK2BQ13554 666 aa8.77□□□□□ -1.01
HDAC1-205ENST00000472928 LTV1Q96GA3 475 aaPredicted RBP8.77□□□□□ -1.01
HDAC1-205ENST00000472928 CICQ96RK0 1608 aaPredicted RBP8.76□□□□□ -1.01
HDAC1-205ENST00000472928 ZCRB1Q8TBF4 217 aaKnown RBP8.76□□□□□ -1.01
HDAC1-205ENST00000472928 C5P01031 1676 aa8.75□□□□□ -1.01
HDAC1-205ENST00000472928 TOGARAM1Q9Y4F4 1720 aa8.75□□□□□ -1.01
HDAC1-205ENST00000472928 EDC4Q6P2E9 1401 aaKnown RBP8.75□□□□□ -1.01
HDAC1-205ENST00000472928 DDX10Q13206 875 aaKnown RBP8.75□□□□□ -1.01
HDAC1-205ENST00000472928 COL13A1Q5TAT6 717 aaPredicted RBP8.75□□□□□ -1.01
HDAC1-205ENST00000472928 FLAD1Q8NFF5 587 aa8.75□□□□□ -1.01
HDAC1-205ENST00000472928 POLR3GLQ9BT43 218 aa8.75□□□□□ -1.01
HDAC1-205ENST00000472928 CLCN6P51797 869 aa8.74□□□□□ -1.01
HDAC1-205ENST00000472928 EVX2Q03828 476 aa8.74□□□□□ -1.01
HDAC1-205ENST00000472928 SMIM5Q71RC9 77 aa8.74□□□□□ -1.01
HDAC1-205ENST00000472928 TESK2Q96S53 571 aa8.74□□□□□ -1.01
HDAC1-205ENST00000472928 SLC12A5Q9H2X9 1139 aa8.74□□□□□ -1.01
HDAC1-205ENST00000472928 TAF1LQ8IZX4 1826 aa8.74□□□□□ -1.01
HDAC1-205ENST00000472928 MAP3K19Q56UN5 1328 aa8.74□□□□□ -1.01
HDAC1-205ENST00000472928 A0A1W2PP64 1363 aa8.73□□□□□ -1.01
HDAC1-205ENST00000472928 PALLDQ8WX93 1383 aa8.73□□□□□ -1.01
HDAC1-205ENST00000472928 HAX1O00165 279 aa8.73□□□□□ -1.01
HDAC1-205ENST00000472928 TOMM70O94826 608 aa8.73□□□□□ -1.01
HDAC1-205ENST00000472928 HOXC9P31274 260 aa8.73□□□□□ -1.01
HDAC1-205ENST00000472928 HTRA3P83110 453 aa8.73□□□□□ -1.01
HDAC1-205ENST00000472928 GPHNQ9NQX3 736 aaPredicted RBP8.73□□□□□ -1.01
HDAC1-205ENST00000472928 RGPD2P0DJD1 1756 aa8.73□□□□□ -1.01
HDAC1-205ENST00000472928 C4BP0C0L5 1744 aa8.72□□□□□ -1.01
HDAC1-205ENST00000472928 FBLN1P23142 703 aa8.72□□□□□ -1.01
HDAC1-205ENST00000472928 TMF1P82094 1093 aa8.72□□□□□ -1.01
HDAC1-205ENST00000472928 NBPF6Q5VWK0 638 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms