RNA–Protein interactions for RNA: ENST00000472844.1

NUP35-208, Transcript of nucleoporin 35, humanhuman

TSL 3

Gene NUP35, Length 514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-208ENST00000472844 SLKQ9H2G2 1235 aaPredicted RBP8.53□□□□□ -1.04
NUP35-208ENST00000472844 TUT1Q9H6E5 874 aaKnown RBP8.53□□□□□ -1.04
NUP35-208ENST00000472844 TTF2Q9UNY4 1162 aaKnown RBP8.53□□□□□ -1.04
NUP35-208ENST00000472844 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.53□□□□□ -1.04
NUP35-208ENST00000472844 TTC36A6NLP5 189 aa8.52□□□□□ -1.05
NUP35-208ENST00000472844 CLGNO14967 610 aa8.52□□□□□ -1.05
NUP35-208ENST00000472844 SPTLC1O15269 473 aa8.52□□□□□ -1.05
NUP35-208ENST00000472844 FANCCQ00597 558 aa8.52□□□□□ -1.05
NUP35-208ENST00000472844 PPM1EQ8WY54 764 aa8.52□□□□□ -1.05
NUP35-208ENST00000472844 ZNF512BQ96KM6 892 aaPredicted RBP8.52□□□□□ -1.05
NUP35-208ENST00000472844 SPATA31D1Q6ZQQ2 1576 aa8.52□□□□□ -1.05
NUP35-208ENST00000472844 TSPOAP1O95153 1857 aa8.51□□□□□ -1.05
NUP35-208ENST00000472844 GPR37L1O60883 481 aa8.51□□□□□ -1.05
NUP35-208ENST00000472844 AMPD3Q01432 767 aa8.51□□□□□ -1.05
NUP35-208ENST00000472844 L1TD1Q5T7N2 865 aaKnown RBP8.51□□□□□ -1.05
NUP35-208ENST00000472844 CCDC174Q6PII3 467 aa8.51□□□□□ -1.05
NUP35-208ENST00000472844 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.51□□□□□ -1.05
NUP35-208ENST00000472844 PAF1Q8N7H5 531 aa8.51□□□□□ -1.05
NUP35-208ENST00000472844 C1orf131Q8NDD1 294 aaKnown RBP8.51□□□□□ -1.05
NUP35-208ENST00000472844 MPHOSPH6Q99547 160 aaKnown RBP8.51□□□□□ -1.05
NUP35-208ENST00000472844 MRS2Q9HD23 443 aa8.51□□□□□ -1.05
NUP35-208ENST00000472844 ANAPC4Q9UJX5 808 aa8.51□□□□□ -1.05
NUP35-208ENST00000472844 NUB1Q9Y5A7 615 aa8.51□□□□□ -1.05
NUP35-208ENST00000472844 AQRO60306 1485 aaKnown RBP eCLIP8.51□□□□□ -1.05
NUP35-208ENST00000472844 FAM196BA6NMK8 535 aa8.5□□□□□ -1.05
NUP35-208ENST00000472844 KIF3BO15066 747 aa8.5□□□□□ -1.05
NUP35-208ENST00000472844 ZNF76P36508 570 aa8.5□□□□□ -1.05
NUP35-208ENST00000472844 MAP3K9P80192 1104 aa8.5□□□□□ -1.05
NUP35-208ENST00000472844 EFCAB2Q5VUJ9 269 aa8.5□□□□□ -1.05
NUP35-208ENST00000472844 GET4Q7L5D6 327 aaPredicted RBP8.5□□□□□ -1.05
NUP35-208ENST00000472844 CREBRFQ8IUR6 639 aa8.5□□□□□ -1.05
NUP35-208ENST00000472844 RGL4Q8IZJ4 473 aa8.5□□□□□ -1.05
NUP35-208ENST00000472844 FAM200AQ8TCP9 573 aa8.5□□□□□ -1.05
NUP35-208ENST00000472844 TMEM121BQ9BXQ6 578 aaPredicted RBP8.5□□□□□ -1.05
NUP35-208ENST00000472844 INPP5FQ9Y2H2 1132 aa8.5□□□□□ -1.05
NUP35-208ENST00000472844 RPGRIP1LQ68CZ1 1315 aa8.5□□□□□ -1.05
NUP35-208ENST00000472844 PPP1R3GB7ZBB8 358 aa8.49□□□□□ -1.05
NUP35-208ENST00000472844 K7ELQ4 463 aaPredicted RBP8.49□□□□□ -1.05
NUP35-208ENST00000472844 IFRD1O00458 451 aaPredicted RBP8.49□□□□□ -1.05
NUP35-208ENST00000472844 ICMTO60725 284 aa8.49□□□□□ -1.05
NUP35-208ENST00000472844 LILRB3O75022 631 aa8.49□□□□□ -1.05
NUP35-208ENST00000472844 FGAP02671 866 aa8.49□□□□□ -1.05
NUP35-208ENST00000472844 FAM69CQ0P6D2 419 aa8.49□□□□□ -1.05
NUP35-208ENST00000472844 VPS72Q15906 364 aa8.49□□□□□ -1.05
NUP35-208ENST00000472844 CCDC96Q2M329 555 aa8.49□□□□□ -1.05
NUP35-208ENST00000472844 PLEKHG4Q58EX7 1191 aa8.49□□□□□ -1.05
NUP35-208ENST00000472844 ERICH6BQ5W0A0 696 aa8.49□□□□□ -1.05
NUP35-208ENST00000472844 FERMT3Q86UX7 667 aa8.49□□□□□ -1.05
NUP35-208ENST00000472844 VPS37DQ86XT2 251 aa8.49□□□□□ -1.05
NUP35-208ENST00000472844 C1orf216Q8TAB5 229 aa8.49□□□□□ -1.05
NUP35-208ENST00000472844 ZHX3Q9H4I2 956 aa8.49□□□□□ -1.05
NUP35-208ENST00000472844 SYNJ1O43426 1573 aa8.48□□□□□ -1.05
NUP35-208ENST00000472844 USP17L15C9J2P7 530 aa8.48□□□□□ -1.05
NUP35-208ENST00000472844 USP17L10C9JJH3 530 aa8.48□□□□□ -1.05
NUP35-208ENST00000472844 USP17L13C9JLJ4 530 aa8.48□□□□□ -1.05
NUP35-208ENST00000472844 USP17L12C9JPN9 530 aa8.48□□□□□ -1.05
NUP35-208ENST00000472844 USP17L11C9JVI0 530 aa8.48□□□□□ -1.05
NUP35-208ENST00000472844 USP17L21D6R901 530 aa8.48□□□□□ -1.05
NUP35-208ENST00000472844 USP17L18D6R9N7 530 aa8.48□□□□□ -1.05
NUP35-208ENST00000472844 USP17L22D6RA61 530 aa8.48□□□□□ -1.05
NUP35-208ENST00000472844 USP17L17D6RBQ6 530 aa8.48□□□□□ -1.05
NUP35-208ENST00000472844 USP17L19D6RCP7 530 aa8.48□□□□□ -1.05
NUP35-208ENST00000472844 USP17L20D6RJB6 530 aa8.48□□□□□ -1.05
NUP35-208ENST00000472844 FOSP01100 380 aaPredicted RBP8.48□□□□□ -1.05
NUP35-208ENST00000472844 SCNN1AP37088 669 aa8.48□□□□□ -1.05
NUP35-208ENST00000472844 PTGER2P43116 358 aa8.48□□□□□ -1.05
NUP35-208ENST00000472844 USP5P45974 858 aa8.48□□□□□ -1.05
NUP35-208ENST00000472844 GOLGA2Q08379 1002 aa8.48□□□□□ -1.05
NUP35-208ENST00000472844 USP17L24Q0WX57 530 aa8.48□□□□□ -1.05
NUP35-208ENST00000472844 ZNF211Q13398 564 aaPredicted RBP8.48□□□□□ -1.05
NUP35-208ENST00000472844 DSG2Q14126 1118 aa8.48□□□□□ -1.05
NUP35-208ENST00000472844 BRD3Q15059 726 aa8.48□□□□□ -1.05
NUP35-208ENST00000472844 MAPRE1Q15691 268 aaKnown RBP8.48□□□□□ -1.05
NUP35-208ENST00000472844 QPCTQ16769 361 aa8.48□□□□□ -1.05
NUP35-208ENST00000472844 TTC39BQ5VTQ0 682 aaPredicted RBP8.48□□□□□ -1.05
NUP35-208ENST00000472844 RSBN1LQ6PCB5 846 aaPredicted RBP8.48□□□□□ -1.05
NUP35-208ENST00000472844 NBPF11Q86T75 865 aa8.48□□□□□ -1.05
NUP35-208ENST00000472844 SAMD3Q8N6K7 520 aa8.48□□□□□ -1.05
NUP35-208ENST00000472844 SPIRE2Q8WWL2 714 aa8.48□□□□□ -1.05
NUP35-208ENST00000472844 DDX12PQ92771 950 aa8.48□□□□□ -1.05
NUP35-208ENST00000472844 APBA2Q99767 749 aa8.48□□□□□ -1.05
NUP35-208ENST00000472844 IER2Q9BTL4 223 aa8.48□□□□□ -1.05
NUP35-208ENST00000472844 CASS4Q9NQ75 786 aa8.48□□□□□ -1.05
NUP35-208ENST00000472844 EID1Q9Y6B2 187 aa8.48□□□□□ -1.05
NUP35-208ENST00000472844 NUTM2BA6NNL0 878 aaPredicted RBP8.47□□□□□ -1.05
NUP35-208ENST00000472844 NUTM2EB1AL46 878 aaPredicted RBP8.47□□□□□ -1.05
NUP35-208ENST00000472844 CAND2O75155 1236 aa8.47□□□□□ -1.05
NUP35-208ENST00000472844 RGS20O76081 388 aa8.47□□□□□ -1.05
NUP35-208ENST00000472844 VDRP11473 427 aa8.47□□□□□ -1.05
NUP35-208ENST00000472844 POLD1P28340 1107 aa8.47□□□□□ -1.05
NUP35-208ENST00000472844 GNALP38405 381 aa8.47□□□□□ -1.05
NUP35-208ENST00000472844 PDE3BQ13370 1112 aa8.47□□□□□ -1.05
NUP35-208ENST00000472844 NUTM2DQ5VT03 806 aaPredicted RBP8.47□□□□□ -1.05
NUP35-208ENST00000472844 NUTM2AQ8IVF1 878 aaPredicted RBP8.47□□□□□ -1.05
NUP35-208ENST00000472844 WDR75Q8IWA0 830 aaKnown RBP8.47□□□□□ -1.05
NUP35-208ENST00000472844 DRC7Q8IY82 874 aa8.47□□□□□ -1.05
NUP35-208ENST00000472844 PDCD7Q8N8D1 485 aaKnown RBP8.47□□□□□ -1.05
NUP35-208ENST00000472844 TSPAN18Q96SJ8 248 aa8.47□□□□□ -1.05
NUP35-208ENST00000472844 GOLIM4O00461 696 aa8.46□□□□□ -1.06
NUP35-208ENST00000472844 TIMM44O43615 452 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms