RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 TERTO14746 1132 aaKnown RBP5.68□□□□□ -1.5
XRN1-209ENST00000472625 C6orf118Q5T5N4 469 aa5.68□□□□□ -1.5
XRN1-209ENST00000472625 NBPF14Q5TI25 921 aa5.68□□□□□ -1.5
XRN1-209ENST00000472625 MRPL14Q6P1L8 145 aaKnown RBP5.68□□□□□ -1.5
XRN1-209ENST00000472625 GPKOWQ92917 476 aaPredicted RBP eCLIP5.68□□□□□ -1.5
XRN1-209ENST00000472625 MLH3Q9UHC1 1453 aa5.68□□□□□ -1.5
XRN1-209ENST00000472625 ZC3H4Q9UPT8 1303 aaKnown RBP5.68□□□□□ -1.5
XRN1-209ENST00000472625 PREX1Q8TCU6 1659 aa5.67□□□□□ -1.5
XRN1-209ENST00000472625 ARHGAP35Q9NRY4 1499 aa5.67□□□□□ -1.5
XRN1-209ENST00000472625 IRF5Q13568 498 aa5.67□□□□□ -1.5
XRN1-209ENST00000472625 MCM6Q14566 821 aa5.67□□□□□ -1.5
XRN1-209ENST00000472625 TMEM132AQ24JP5 1023 aa5.67□□□□□ -1.5
XRN1-209ENST00000472625 VASH1Q7L8A9 365 aaPredicted RBP5.67□□□□□ -1.5
XRN1-209ENST00000472625 AGLP35573 1532 aa5.67□□□□□ -1.5
XRN1-209ENST00000472625 CASKIN1Q8WXD9 1431 aa5.66□□□□□ -1.5
XRN1-209ENST00000472625 PLEKHH2Q8IVE3 1493 aa5.66□□□□□ -1.5
XRN1-209ENST00000472625 FYCO1Q9BQS8 1478 aa5.66□□□□□ -1.5
XRN1-209ENST00000472625 ARMC2Q8NEN0 867 aa5.66□□□□□ -1.5
XRN1-209ENST00000472625 IQSEC2Q5JU85 1478 aa5.65□□□□□ -1.5
XRN1-209ENST00000472625 ABCC1P33527 1531 aa5.65□□□□□ -1.5
XRN1-209ENST00000472625 FBXO45P0C2W1 286 aa5.65□□□□□ -1.5
XRN1-209ENST00000472625 MLECQ14165 292 aa5.65□□□□□ -1.5
XRN1-209ENST00000472625 TBC1D2BQ9UPU7 963 aa5.65□□□□□ -1.5
XRN1-209ENST00000472625 MAP4K5Q9Y4K4 846 aa5.65□□□□□ -1.5
XRN1-209ENST00000472625 PREX2Q70Z35 1606 aa5.65□□□□□ -1.51
XRN1-209ENST00000472625 NPATQ14207 1427 aa5.65□□□□□ -1.51
XRN1-209ENST00000472625 DIP2CQ9Y2E4 1556 aa5.64□□□□□ -1.51
XRN1-209ENST00000472625 HSPA2P54652 639 aa5.64□□□□□ -1.51
XRN1-209ENST00000472625 NR5A1Q13285 461 aa5.64□□□□□ -1.51
XRN1-209ENST00000472625 SCARF1Q14162 830 aa5.64□□□□□ -1.51
XRN1-209ENST00000472625 ADAM32Q8TC27 787 aa5.64□□□□□ -1.51
XRN1-209ENST00000472625 ARHGAP9Q9BRR9 750 aa5.64□□□□□ -1.51
XRN1-209ENST00000472625 STK17AQ9UEE5 414 aa5.64□□□□□ -1.51
XRN1-209ENST00000472625 GPSM3Q9Y4H4 160 aa5.64□□□□□ -1.51
XRN1-209ENST00000472625 PTPRTO14522 1441 aa5.64□□□□□ -1.51
XRN1-209ENST00000472625 TRAPPC8Q9Y2L5 1435 aa5.64□□□□□ -1.51
XRN1-209ENST00000472625 BMP2P12643 396 aa5.63□□□□□ -1.51
XRN1-209ENST00000472625 RAB15P59190 212 aa5.63□□□□□ -1.51
XRN1-209ENST00000472625 CBLBQ13191 982 aa5.63□□□□□ -1.51
XRN1-209ENST00000472625 NXF1Q9UBU9 619 aaKnown RBP5.63□□□□□ -1.51
XRN1-209ENST00000472625 ERBB4Q15303 1308 aa5.63□□□□□ -1.51
XRN1-209ENST00000472625 KIAA1107Q9UPP5 1409 aa5.63□□□□□ -1.51
XRN1-209ENST00000472625 ESPNB1AK53 854 aa5.62□□□□□ -1.51
XRN1-209ENST00000472625 GMPRP36959 345 aa5.62□□□□□ -1.51
XRN1-209ENST00000472625 CCDC116Q8IYX3 515 aa5.62□□□□□ -1.51
XRN1-209ENST00000472625 LINC00528Q8N1L1 170 aa5.62□□□□□ -1.51
XRN1-209ENST00000472625 MEIOBQ8N635 442 aa5.62□□□□□ -1.51
XRN1-209ENST00000472625 SLC10A4Q96EP9 437 aa5.62□□□□□ -1.51
XRN1-209ENST00000472625 POM121Q96HA1 1249 aa5.62□□□□□ -1.51
XRN1-209ENST00000472625 FAM135AQ9P2D6 1515 aa5.62□□□□□ -1.51
XRN1-209ENST00000472625 ABCA6Q8N139 1617 aa5.62□□□□□ -1.51
XRN1-209ENST00000472625 ZBBXA8MT70 800 aa5.61□□□□□ -1.51
XRN1-209ENST00000472625 SPAG9O60271 1321 aaKnown RBP5.61□□□□□ -1.51
XRN1-209ENST00000472625 PLA2R1Q13018 1463 aa5.61□□□□□ -1.51
XRN1-209ENST00000472625 PPP1R26Q5T8A7 1209 aaPredicted RBP5.61□□□□□ -1.51
XRN1-209ENST00000472625 ZBTB33Q86T24 672 aa5.61□□□□□ -1.51
XRN1-209ENST00000472625 AFAP1Q8N556 730 aa5.61□□□□□ -1.51
XRN1-209ENST00000472625 ITSN2Q9NZM3 1697 aa5.61□□□□□ -1.51
XRN1-209ENST00000472625 NDUFB9Q9Y6M9 179 aa5.61□□□□□ -1.51
XRN1-209ENST00000472625 MROH2AA6NES4 1674 aa5.6□□□□□ -1.51
XRN1-209ENST00000472625 NCOA1Q15788 1441 aa5.6□□□□□ -1.51
XRN1-209ENST00000472625 MTUS2Q5JR59 1369 aa5.6□□□□□ -1.51
XRN1-209ENST00000472625 CCNB3Q8WWL7 1395 aa5.6□□□□□ -1.51
XRN1-209ENST00000472625 H3BM21 787 aa5.6□□□□□ -1.51
XRN1-209ENST00000472625 WIPF1O43516 503 aa5.6□□□□□ -1.51
XRN1-209ENST00000472625 MAN1A2O60476 641 aa5.6□□□□□ -1.51
XRN1-209ENST00000472625 PTK2Q05397 1052 aa5.6□□□□□ -1.51
XRN1-209ENST00000472625 INTS6LQ5JSJ4 861 aaKnown RBP5.6□□□□□ -1.51
XRN1-209ENST00000472625 KDF1Q8NAX2 398 aaPredicted RBP5.6□□□□□ -1.51
XRN1-209ENST00000472625 SLC16A10Q8TF71 515 aa5.6□□□□□ -1.51
XRN1-209ENST00000472625 KCTD15Q96SI1 283 aaPredicted RBP5.6□□□□□ -1.51
XRN1-209ENST00000472625 COG6Q9Y2V7 657 aa5.6□□□□□ -1.51
XRN1-209ENST00000472625 SIGLEC1Q9BZZ2 1709 aa5.6□□□□□ -1.51
XRN1-209ENST00000472625 PLXNC1O60486 1568 aa5.59□□□□□ -1.51
XRN1-209ENST00000472625 SAMD9LQ8IVG5 1584 aa5.59□□□□□ -1.51
XRN1-209ENST00000472625 ATP7AQ04656 1500 aa5.59□□□□□ -1.51
XRN1-209ENST00000472625 SYCP2Q9BX26 1530 aa5.59□□□□□ -1.51
XRN1-209ENST00000472625 SETD1BQ9UPS6 1966 aaKnown RBP5.59□□□□□ -1.51
XRN1-209ENST00000472625 AGBL1Q96MI9 1066 aa5.59□□□□□ -1.51
XRN1-209ENST00000472625 GDPD2Q9HCC8 539 aa5.59□□□□□ -1.51
XRN1-209ENST00000472625 TMPRSS4Q9NRS4 437 aa5.59□□□□□ -1.51
XRN1-209ENST00000472625 CFDP1Q9UEE9 299 aaPredicted RBP5.59□□□□□ -1.51
XRN1-209ENST00000472625 DNMT3LQ9UJW3 386 aa5.59□□□□□ -1.51
XRN1-209ENST00000472625 EHBP1L1Q8N3D4 1523 aa5.58□□□□□ -1.52
XRN1-209ENST00000472625 A2MP01023 1474 aa5.58□□□□□ -1.52
XRN1-209ENST00000472625 CDC42BPBQ9Y5S2 1711 aa5.58□□□□□ -1.52
XRN1-209ENST00000472625 FIGNL2A6NMB9 653 aa5.58□□□□□ -1.52
XRN1-209ENST00000472625 UPP2O95045 317 aa5.58□□□□□ -1.52
XRN1-209ENST00000472625 CEBPAP49715 358 aaPredicted RBP5.58□□□□□ -1.52
XRN1-209ENST00000472625 NR1H3Q13133 447 aa5.58□□□□□ -1.52
XRN1-209ENST00000472625 EMILIN1Q9Y6C2 1016 aa5.58□□□□□ -1.52
XRN1-209ENST00000472625 C3P01024 1663 aa5.58□□□□□ -1.52
XRN1-209ENST00000472625 INO80Q9ULG1 1556 aaPredicted RBP5.58□□□□□ -1.52
XRN1-209ENST00000472625 GPATCH8Q9UKJ3 1502 aaKnown RBP5.58□□□□□ -1.52
XRN1-209ENST00000472625 RTEL1-TNFRSF6BF6WH68 1400 aa5.57□□□□□ -1.52
XRN1-209ENST00000472625 DISP3Q9P2K9 1392 aa5.57□□□□□ -1.52
XRN1-209ENST00000472625 ZNF142P52746 1687 aaPredicted RBP5.57□□□□□ -1.52
XRN1-209ENST00000472625 SOS2Q07890 1332 aaPredicted RBP5.57□□□□□ -1.52
XRN1-209ENST00000472625 LILRA1O75019 489 aa5.57□□□□□ -1.52
XRN1-209ENST00000472625 RELBQ01201 579 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms