RNA–Protein interactions for RNA: ENST00000472622.5

TMEM254-210, Transcript of transmembrane protein 254, humanhuman

TSL 2

Gene TMEM254, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-210ENST00000472622 PHF14O94880 888 aa19.7■□□□□ 0.74
TMEM254-210ENST00000472622 GOLGB1Q14789 3259 aaKnown RBP19.7■□□□□ 0.74
TMEM254-210ENST00000472622 GNPATO15228 680 aa19.69■□□□□ 0.74
TMEM254-210ENST00000472622 ITPK1Q13572 414 aa19.69■□□□□ 0.74
TMEM254-210ENST00000472622 ZNF530Q6P9A1 599 aaPredicted RBP19.69■□□□□ 0.74
TMEM254-210ENST00000472622 UBR3Q6ZT12 1888 aa19.69■□□□□ 0.74
TMEM254-210ENST00000472622 C1orf141Q5JVX7 400 aa19.68■□□□□ 0.74
TMEM254-210ENST00000472622 AMIGO3Q86WK7 504 aa19.68■□□□□ 0.74
TMEM254-210ENST00000472622 KDRP35968 1356 aa19.68■□□□□ 0.74
TMEM254-210ENST00000472622 YBX3P16989 372 aaKnown RBP eCLIP19.67■□□□□ 0.74
TMEM254-210ENST00000472622 CABP4P57796 275 aa19.67■□□□□ 0.74
TMEM254-210ENST00000472622 MTHFSP49914 203 aa19.66■□□□□ 0.74
TMEM254-210ENST00000472622 AMER1Q5JTC6 1135 aaPredicted RBP19.66■□□□□ 0.74
TMEM254-210ENST00000472622 RC3H1Q5TC82 1133 aaKnown RBP19.66■□□□□ 0.74
TMEM254-210ENST00000472622 ZNF831Q5JPB2 1677 aa19.65■□□□□ 0.74
TMEM254-210ENST00000472622 ADRA2BP18089 450 aa19.65■□□□□ 0.74
TMEM254-210ENST00000472622 IL13P35225 146 aa19.65■□□□□ 0.74
TMEM254-210ENST00000472622 RTCBQ9Y3I0 505 aaKnown RBP19.65■□□□□ 0.74
TMEM254-210ENST00000472622 SULT6B1Q6IMI4 303 aa19.64■□□□□ 0.73
TMEM254-210ENST00000472622 AEBP1Q8IUX7 1158 aa19.64■□□□□ 0.73
TMEM254-210ENST00000472622 RBM42Q9BTD8 480 aaKnown RBP19.64■□□□□ 0.73
TMEM254-210ENST00000472622 KIF7Q2M1P5 1343 aa19.64■□□□□ 0.73
TMEM254-210ENST00000472622 KDM6AO15550 1401 aaPredicted RBP19.64■□□□□ 0.73
TMEM254-210ENST00000472622 CNTNAP4Q9C0A0 1308 aa19.63■□□□□ 0.73
TMEM254-210ENST00000472622 TRAPPC3LQ5T215 181 aa19.63■□□□□ 0.73
TMEM254-210ENST00000472622 NLGN1Q8N2Q7 840 aa19.63■□□□□ 0.73
TMEM254-210ENST00000472622 SMIM5Q71RC9 77 aa19.61■□□□□ 0.73
TMEM254-210ENST00000472622 SLC4A9Q96Q91 983 aa19.61■□□□□ 0.73
TMEM254-210ENST00000472622 RPS6KA4O75676 772 aa19.6■□□□□ 0.73
TMEM254-210ENST00000472622 C1QTNF8P60827 252 aa19.6■□□□□ 0.73
TMEM254-210ENST00000472622 GIGYF1O75420 1035 aaPredicted RBP19.59■□□□□ 0.73
TMEM254-210ENST00000472622 MMP10P09238 476 aa19.59■□□□□ 0.73
TMEM254-210ENST00000472622 AKAP4Q5JQC9 854 aa19.59■□□□□ 0.73
TMEM254-210ENST00000472622 NFATC2IPQ8NCF5 419 aa19.59■□□□□ 0.73
TMEM254-210ENST00000472622 PER1O15534 1290 aaPredicted RBP19.58■□□□□ 0.72
TMEM254-210ENST00000472622 RFC4P35249 363 aa19.57■□□□□ 0.72
TMEM254-210ENST00000472622 ARHGEF1Q92888 912 aaKnown RBP19.57■□□□□ 0.72
TMEM254-210ENST00000472622 PTCD1O75127 700 aaKnown RBP19.56■□□□□ 0.72
TMEM254-210ENST00000472622 NPC1L1Q9UHC9 1359 aa19.56■□□□□ 0.72
TMEM254-210ENST00000472622 COL5A3P25940 1745 aaPredicted RBP19.55■□□□□ 0.72
TMEM254-210ENST00000472622 TGFB2P61812 414 aa19.55■□□□□ 0.72
TMEM254-210ENST00000472622 DIAPH1O60610 1272 aaKnown RBP19.54■□□□□ 0.72
TMEM254-210ENST00000472622 GYS1P13807 737 aa19.54■□□□□ 0.72
TMEM254-210ENST00000472622 SLC52A2Q9HAB3 445 aa19.54■□□□□ 0.72
TMEM254-210ENST00000472622 CRKLP46109 303 aaKnown RBP19.53■□□□□ 0.72
TMEM254-210ENST00000472622 CCDC87Q9NVE4 849 aa19.53■□□□□ 0.72
TMEM254-210ENST00000472622 CICQ96RK0 1608 aaPredicted RBP19.53■□□□□ 0.72
TMEM254-210ENST00000472622 ATP10DQ9P241 1426 aa19.52■□□□□ 0.72
TMEM254-210ENST00000472622 PARP3Q9Y6F1 533 aa19.52■□□□□ 0.72
TMEM254-210ENST00000472622 C10orf71Q711Q0 1435 aa19.51■□□□□ 0.71
TMEM254-210ENST00000472622 SENP3-EIF4A1A0A087X0R7 540 aa19.51■□□□□ 0.71
TMEM254-210ENST00000472622 CC2D1BQ5T0F9 858 aaKnown RBP19.51■□□□□ 0.71
TMEM254-210ENST00000472622 ADCY9O60503 1353 aa19.51■□□□□ 0.71
TMEM254-210ENST00000472622 SCN11AQ9UI33 1791 aa19.5■□□□□ 0.71
TMEM254-210ENST00000472622 PXDNLA1KZ92 1463 aa19.5■□□□□ 0.71
TMEM254-210ENST00000472622 RNMTO43148 476 aaKnown RBP19.5■□□□□ 0.71
TMEM254-210ENST00000472622 HMOX1P09601 288 aa19.5■□□□□ 0.71
TMEM254-210ENST00000472622 MRC1P22897 1456 aa19.49■□□□□ 0.71
TMEM254-210ENST00000472622 LGR6Q9HBX8 967 aa19.49■□□□□ 0.71
TMEM254-210ENST00000472622 GPBP1L1Q9HC44 474 aaPredicted RBP19.49■□□□□ 0.71
TMEM254-210ENST00000472622 USP42Q9H9J4 1324 aaKnown RBP19.49■□□□□ 0.71
TMEM254-210ENST00000472622 KIF13BQ9NQT8 1826 aa19.48■□□□□ 0.71
TMEM254-210ENST00000472622 C4AP0C0L4 1744 aa19.48■□□□□ 0.71
TMEM254-210ENST00000472622 MYH14Q7Z406 1995 aaKnown RBP19.47■□□□□ 0.71
TMEM254-210ENST00000472622 MTHFSDQ2M296 383 aaKnown RBP19.47■□□□□ 0.71
TMEM254-210ENST00000472622 INTS5Q6P9B9 1019 aaKnown RBP19.47■□□□□ 0.71
TMEM254-210ENST00000472622 VSIG10Q8N0Z9 540 aa19.47■□□□□ 0.71
TMEM254-210ENST00000472622 TJP1Q07157 1748 aa19.45■□□□□ 0.7
TMEM254-210ENST00000472622 A0A0G2JLW4 131 aa19.45■□□□□ 0.7
TMEM254-210ENST00000472622 DNAJC10Q8IXB1 793 aa19.45■□□□□ 0.7
TMEM254-210ENST00000472622 WWC3Q9ULE0 1092 aa19.45■□□□□ 0.7
TMEM254-210ENST00000472622 ADAMTS7Q9UKP4 1686 aa19.44■□□□□ 0.7
TMEM254-210ENST00000472622 ZPR1O75312 459 aa19.44■□□□□ 0.7
TMEM254-210ENST00000472622 CYP19A1P11511 503 aaPredicted RBP19.44■□□□□ 0.7
TMEM254-210ENST00000472622 BCS1LQ9Y276 419 aa19.44■□□□□ 0.7
TMEM254-210ENST00000472622 COL3A1P02461 1466 aaPredicted RBP19.43■□□□□ 0.7
TMEM254-210ENST00000472622 DPEP1P16444 411 aa19.43■□□□□ 0.7
TMEM254-210ENST00000472622 FKBP8Q14318 412 aa19.43■□□□□ 0.7
TMEM254-210ENST00000472622 GAS2L2Q8NHY3 880 aa19.43■□□□□ 0.7
TMEM254-210ENST00000472622 SRP68Q9UHB9 627 aaKnown RBP19.43■□□□□ 0.7
TMEM254-210ENST00000472622 SOS1Q07889 1333 aaPredicted RBP19.43■□□□□ 0.7
TMEM254-210ENST00000472622 U2SURPO15042 1029 aaKnown RBP19.42■□□□□ 0.7
TMEM254-210ENST00000472622 SLC39A6Q13433 755 aa19.42■□□□□ 0.7
TMEM254-210ENST00000472622 KIAA1551Q9HCM1 1747 aa19.42■□□□□ 0.7
TMEM254-210ENST00000472622 KCPQ6ZWJ8 1503 aa19.41■□□□□ 0.7
TMEM254-210ENST00000472622 TM4SF1P30408 202 aa19.41■□□□□ 0.7
TMEM254-210ENST00000472622 TTC5Q8N0Z6 440 aa19.41■□□□□ 0.7
TMEM254-210ENST00000472622 CFAP53Q96M91 514 aa19.41■□□□□ 0.7
TMEM254-210ENST00000472622 PIM2Q9P1W9 311 aa19.41■□□□□ 0.7
TMEM254-210ENST00000472622 GNAT3A8MTJ3 354 aa19.4■□□□□ 0.7
TMEM254-210ENST00000472622 FCHSD2O94868 740 aa19.4■□□□□ 0.7
TMEM254-210ENST00000472622 STARD3NLO95772 234 aa19.4■□□□□ 0.7
TMEM254-210ENST00000472622 DDR1Q08345 913 aa19.4■□□□□ 0.7
TMEM254-210ENST00000472622 TEFQ10587 303 aa19.4■□□□□ 0.7
TMEM254-210ENST00000472622 NARFQ9UHQ1 456 aa19.4■□□□□ 0.7
TMEM254-210ENST00000472622 POLRMTO00411 1230 aaKnown RBP19.39■□□□□ 0.69
TMEM254-210ENST00000472622 KCNA3P22001 575 aa19.39■□□□□ 0.69
TMEM254-210ENST00000472622 USPL1Q5W0Q7 1092 aa19.39■□□□□ 0.69
TMEM254-210ENST00000472622 ARHGAP27Q6ZUM4 889 aa19.39■□□□□ 0.69
TMEM254-210ENST00000472622 TEX13AQ9BXU3 409 aaPredicted RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms