RNA–Protein interactions for RNA: ENST00000472320.1

GDF9-204, Transcript of growth differentiation factor 9, humanhuman

TSL 2

Gene GDF9, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9-204ENST00000472320 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.67□□□□□ -0.54
GDF9-204ENST00000472320 LINC00116Q8NCU8 138 aa11.67□□□□□ -0.54
GDF9-204ENST00000472320 PCDH11XQ9BZA7 1347 aa11.66□□□□□ -0.54
GDF9-204ENST00000472320 PCDH11YQ9BZA8 1340 aa11.66□□□□□ -0.54
GDF9-204ENST00000472320 MAP2P11137 1827 aaKnown RBP11.66□□□□□ -0.54
GDF9-204ENST00000472320 LOC102724428A0A0B4J2F2 783 aa11.66□□□□□ -0.54
GDF9-204ENST00000472320 SIK1P57059 783 aa11.66□□□□□ -0.54
GDF9-204ENST00000472320 LTV1Q96GA3 475 aaPredicted RBP11.66□□□□□ -0.54
GDF9-204ENST00000472320 TNRC18O15417 2968 aaPredicted RBP11.65□□□□□ -0.54
GDF9-204ENST00000472320 CD163L1Q9NR16 1453 aa11.65□□□□□ -0.54
GDF9-204ENST00000472320 LMNB1P20700 586 aa11.65□□□□□ -0.54
GDF9-204ENST00000472320 ADRA2BP18089 450 aa11.64□□□□□ -0.55
GDF9-204ENST00000472320 RAPGEF4Q8WZA2 1011 aa11.64□□□□□ -0.55
GDF9-204ENST00000472320 PARP3Q9Y6F1 533 aa11.64□□□□□ -0.55
GDF9-204ENST00000472320 EDC4Q6P2E9 1401 aaKnown RBP11.63□□□□□ -0.55
GDF9-204ENST00000472320 PDE4DIPQ5VU43 2346 aa11.63□□□□□ -0.55
GDF9-204ENST00000472320 CCDC85CA6NKD9 419 aa11.63□□□□□ -0.55
GDF9-204ENST00000472320 POTECB2RU33 542 aa11.63□□□□□ -0.55
GDF9-204ENST00000472320 HSPA8P11142 646 aaKnown RBP11.63□□□□□ -0.55
GDF9-204ENST00000472320 HOXC9P31274 260 aa11.63□□□□□ -0.55
GDF9-204ENST00000472320 TRAPPC3LQ5T215 181 aa11.63□□□□□ -0.55
GDF9-204ENST00000472320 CHADLQ6NUI6 762 aa11.63□□□□□ -0.55
GDF9-204ENST00000472320 PIAS4Q8N2W9 510 aaPredicted RBP11.63□□□□□ -0.55
GDF9-204ENST00000472320 RTCBQ9Y3I0 505 aaKnown RBP11.63□□□□□ -0.55
GDF9-204ENST00000472320 GYS1P13807 737 aa11.62□□□□□ -0.55
GDF9-204ENST00000472320 PIGBQ92521 554 aa11.62□□□□□ -0.55
GDF9-204ENST00000472320 ITGB4P16144 1822 aa11.62□□□□□ -0.55
GDF9-204ENST00000472320 MAP3K19Q56UN5 1328 aa11.61□□□□□ -0.55
GDF9-204ENST00000472320 VIRMAQ69YN4 1812 aaKnown RBP11.61□□□□□ -0.55
GDF9-204ENST00000472320 TATP17735 454 aaPredicted RBP11.61□□□□□ -0.55
GDF9-204ENST00000472320 VEGFBP49765 207 aa11.61□□□□□ -0.55
GDF9-204ENST00000472320 ITPK1Q13572 414 aa11.61□□□□□ -0.55
GDF9-204ENST00000472320 DPY19L2Q6NUT2 758 aa11.61□□□□□ -0.55
GDF9-204ENST00000472320 PASKQ96RG2 1323 aa11.6□□□□□ -0.55
GDF9-204ENST00000472320 RGPD2P0DJD1 1756 aa11.6□□□□□ -0.55
GDF9-204ENST00000472320 RTL1A6NKG5 1358 aa11.6□□□□□ -0.55
GDF9-204ENST00000472320 CYP27B1O15528 508 aa11.6□□□□□ -0.55
GDF9-204ENST00000472320 MAP2K1Q02750 393 aaPredicted RBP11.6□□□□□ -0.55
GDF9-204ENST00000472320 RASSF7Q02833 373 aa11.6□□□□□ -0.55
GDF9-204ENST00000472320 NBPF6Q5VWK0 638 aa11.6□□□□□ -0.55
GDF9-204ENST00000472320 NBPF4Q96M43 638 aa11.6□□□□□ -0.55
GDF9-204ENST00000472320 ATP6V1AP38606 617 aa11.59□□□□□ -0.55
GDF9-204ENST00000472320 AMPHP49418 695 aa11.59□□□□□ -0.55
GDF9-204ENST00000472320 NKX1-1Q15270 411 aaPredicted RBP11.59□□□□□ -0.55
GDF9-204ENST00000472320 HDGFL2Q7Z4V5 671 aaPredicted RBP11.59□□□□□ -0.55
GDF9-204ENST00000472320 ARHGEF1Q92888 912 aaKnown RBP11.59□□□□□ -0.55
GDF9-204ENST00000472320 TIAM2Q8IVF5 1701 aa11.59□□□□□ -0.55
GDF9-204ENST00000472320 SMG6Q86US8 1419 aaKnown RBP11.59□□□□□ -0.55
GDF9-204ENST00000472320 RAB3GAP2Q9H2M9 1393 aa11.58□□□□□ -0.56
GDF9-204ENST00000472320 TMEM88BA6NKF7 163 aa11.58□□□□□ -0.56
GDF9-204ENST00000472320 RFC4P35249 363 aa11.58□□□□□ -0.56
GDF9-204ENST00000472320 RC3H1Q5TC82 1133 aaKnown RBP11.58□□□□□ -0.56
GDF9-204ENST00000472320 ZNF831Q5JPB2 1677 aa11.57□□□□□ -0.56
GDF9-204ENST00000472320 CHRNA5P30532 468 aa11.57□□□□□ -0.56
GDF9-204ENST00000472320 CNTNAP4Q9C0A0 1308 aa11.57□□□□□ -0.56
GDF9-204ENST00000472320 RASSF10A6NK89 507 aa11.56□□□□□ -0.56
GDF9-204ENST00000472320 KDRP35968 1356 aa11.55□□□□□ -0.56
GDF9-204ENST00000472320 RPS6KA4O75676 772 aa11.55□□□□□ -0.56
GDF9-204ENST00000472320 LDHDQ86WU2 507 aa11.55□□□□□ -0.56
GDF9-204ENST00000472320 USHBP1Q8N6Y0 703 aa11.55□□□□□ -0.56
GDF9-204ENST00000472320 TERF2IPQ9NYB0 399 aa11.55□□□□□ -0.56
GDF9-204ENST00000472320 TMOD3Q9NYL9 352 aa11.55□□□□□ -0.56
GDF9-204ENST00000472320 ASAP1Q9ULH1 1129 aa11.55□□□□□ -0.56
GDF9-204ENST00000472320 DEFB115Q30KQ5 88 aa11.54□□□□□ -0.56
GDF9-204ENST00000472320 COG3Q96JB2 828 aa11.54□□□□□ -0.56
GDF9-204ENST00000472320 A0A1W2PP64 1363 aa11.54□□□□□ -0.56
GDF9-204ENST00000472320 IQCA1LA6NCM1 817 aa11.53□□□□□ -0.56
GDF9-204ENST00000472320 NFKBIEO00221 500 aa11.53□□□□□ -0.56
GDF9-204ENST00000472320 ITGBL1O95965 494 aaPredicted RBP11.53□□□□□ -0.56
GDF9-204ENST00000472320 POTEIP0CG38 1075 aa11.53□□□□□ -0.56
GDF9-204ENST00000472320 POTEJP0CG39 1038 aa11.53□□□□□ -0.56
GDF9-204ENST00000472320 DDR1Q08345 913 aa11.53□□□□□ -0.56
GDF9-204ENST00000472320 PRPF38BQ5VTL8 546 aaKnown RBP11.53□□□□□ -0.56
GDF9-204ENST00000472320 ATG3Q9NT62 314 aa11.53□□□□□ -0.56
GDF9-204ENST00000472320 WDR33Q9C0J8 1336 aaKnown RBP11.53□□□□□ -0.56
GDF9-204ENST00000472320 TTLL6Q8N841 843 aa11.52□□□□□ -0.57
GDF9-204ENST00000472320 BEGAINQ9BUH8 593 aa11.52□□□□□ -0.57
GDF9-204ENST00000472320 USP42Q9H9J4 1324 aaKnown RBP11.52□□□□□ -0.57
GDF9-204ENST00000472320 THSD7BQ9C0I4 1608 aa11.52□□□□□ -0.57
GDF9-204ENST00000472320 COL5A3P25940 1745 aaPredicted RBP11.52□□□□□ -0.57
GDF9-204ENST00000472320 CCDC88AQ3V6T2 1871 aa11.51□□□□□ -0.57
GDF9-204ENST00000472320 POLRMTO00411 1230 aaKnown RBP11.51□□□□□ -0.57
GDF9-204ENST00000472320 ERFEQ4G0M1 354 aa11.51□□□□□ -0.57
GDF9-204ENST00000472320 TMC1Q8TDI8 760 aa11.51□□□□□ -0.57
GDF9-204ENST00000472320 CFAP44Q96MT7 982 aa11.51□□□□□ -0.57
GDF9-204ENST00000472320 SLC12A5Q9H2X9 1139 aa11.51□□□□□ -0.57
GDF9-204ENST00000472320 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.51□□□□□ -0.57
GDF9-204ENST00000472320 SPG7Q9UQ90 795 aa11.51□□□□□ -0.57
GDF9-204ENST00000472320 INSRP06213 1382 aa11.51□□□□□ -0.57
GDF9-204ENST00000472320 DLEC1Q9Y238 1755 aa11.51□□□□□ -0.57
GDF9-204ENST00000472320 FKBP8Q14318 412 aa11.5□□□□□ -0.57
GDF9-204ENST00000472320 SLC4A9Q96Q91 983 aa11.5□□□□□ -0.57
GDF9-204ENST00000472320 MCOLN1Q9GZU1 580 aa11.5□□□□□ -0.57
GDF9-204ENST00000472320 KIF24Q5T7B8 1368 aa11.5□□□□□ -0.57
GDF9-204ENST00000472320 DICER1Q9UPY3 1922 aaKnown RBP11.5□□□□□ -0.57
GDF9-204ENST00000472320 NCAPD2Q15021 1401 aa11.5□□□□□ -0.57
GDF9-204ENST00000472320 TM4SF1P30408 202 aa11.49□□□□□ -0.57
GDF9-204ENST00000472320 L3MBTL3Q96JM7 780 aaPredicted RBP11.49□□□□□ -0.57
GDF9-204ENST00000472320 PUS7Q96PZ0 661 aaKnown RBP11.49□□□□□ -0.57
GDF9-204ENST00000472320 SCN4AP35499 1836 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms