RNA–Protein interactions for RNA: ENST00000472230.5

GCFC2-208, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2

Gene GCFC2, Length 2,265 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-208ENST00000472230 EIF4A1P60842 406 aaKnown RBP23.11■■□□□ 1.29
GCFC2-208ENST00000472230 HDGFL1Q5TGJ6 251 aa23.1■■□□□ 1.29
GCFC2-208ENST00000472230 ADAMTS7Q9UKP4 1686 aa23.09■■□□□ 1.29
GCFC2-208ENST00000472230 G2E3Q7L622 706 aa23.09■■□□□ 1.29
GCFC2-208ENST00000472230 WDR17Q8IZU2 1322 aa23.09■■□□□ 1.29
GCFC2-208ENST00000472230 HOXB7P09629 217 aa23.08■■□□□ 1.29
GCFC2-208ENST00000472230 TOM1L2Q6ZVM7 507 aa23.08■■□□□ 1.29
GCFC2-208ENST00000472230 SIPA1L3O60292 1781 aaPredicted RBP23.08■■□□□ 1.29
GCFC2-208ENST00000472230 ROBO1Q9Y6N7 1651 aa23.08■■□□□ 1.29
GCFC2-208ENST00000472230 IFNL2Q8IZJ0 200 aa23.08■■□□□ 1.29
GCFC2-208ENST00000472230 SCN11AQ9UI33 1791 aa23.08■■□□□ 1.28
GCFC2-208ENST00000472230 PHKG2P15735 406 aa23.07■■□□□ 1.28
GCFC2-208ENST00000472230 C1orf115Q9H7X2 142 aa23.07■■□□□ 1.28
GCFC2-208ENST00000472230 PKD1L3Q7Z443 1732 aa23.07■■□□□ 1.28
GCFC2-208ENST00000472230 FAM161AQ3B820 660 aa23.07■■□□□ 1.28
GCFC2-208ENST00000472230 FLIIQ13045 1269 aa23.06■■□□□ 1.28
GCFC2-208ENST00000472230 PARP4Q9UKK3 1724 aaKnown RBP23.06■■□□□ 1.28
GCFC2-208ENST00000472230 COL5A2P05997 1499 aaPredicted RBP23.06■■□□□ 1.28
GCFC2-208ENST00000472230 KCNQ3O43525 872 aa23.06■■□□□ 1.28
GCFC2-208ENST00000472230 FKBP5Q13451 457 aaPredicted RBP23.06■■□□□ 1.28
GCFC2-208ENST00000472230 EIF2S2P20042 333 aaKnown RBP23.05■■□□□ 1.28
GCFC2-208ENST00000472230 CCT4P50991 539 aaKnown RBP23.05■■□□□ 1.28
GCFC2-208ENST00000472230 SLC4A10Q6U841 1118 aa23.05■■□□□ 1.28
GCFC2-208ENST00000472230 SMC5Q8IY18 1101 aa23.05■■□□□ 1.28
GCFC2-208ENST00000472230 EVA1CP58658 441 aa23.04■■□□□ 1.28
GCFC2-208ENST00000472230 LTBP4Q8N2S1 1624 aa23.04■■□□□ 1.28
GCFC2-208ENST00000472230 HSP90AB1P08238 724 aaKnown RBP23.03■■□□□ 1.28
GCFC2-208ENST00000472230 ANP32AP39687 249 aaKnown RBP23.03■■□□□ 1.28
GCFC2-208ENST00000472230 F6X3S4 739 aa23.02■■□□□ 1.28
GCFC2-208ENST00000472230 SLC52A2Q9HAB3 445 aa23.02■■□□□ 1.28
GCFC2-208ENST00000472230 STRN4Q9NRL3 753 aa23.02■■□□□ 1.28
GCFC2-208ENST00000472230 KDM6AO15550 1401 aaPredicted RBP23.02■■□□□ 1.28
GCFC2-208ENST00000472230 AHDC1Q5TGY3 1603 aaPredicted RBP23.02■■□□□ 1.27
GCFC2-208ENST00000472230 GCC1Q96CN9 775 aa23.01■■□□□ 1.27
GCFC2-208ENST00000472230 DCAF5Q96JK2 942 aa23.01■■□□□ 1.27
GCFC2-208ENST00000472230 CARD10Q9BWT7 1032 aa23■■□□□ 1.27
GCFC2-208ENST00000472230 CYP27B1O15528 508 aa22.98■■□□□ 1.27
GCFC2-208ENST00000472230 C8orf34Q49A92 452 aa22.98■■□□□ 1.27
GCFC2-208ENST00000472230 ZCRB1Q8TBF4 217 aaKnown RBP22.98■■□□□ 1.27
GCFC2-208ENST00000472230 CHPF2Q9P2E5 772 aa22.98■■□□□ 1.27
GCFC2-208ENST00000472230 MEIS3Q99687 375 aa22.97■■□□□ 1.27
GCFC2-208ENST00000472230 PCDH11XQ9BZA7 1347 aa22.97■■□□□ 1.27
GCFC2-208ENST00000472230 PCDH11YQ9BZA8 1340 aa22.97■■□□□ 1.27
GCFC2-208ENST00000472230 PXDNLA1KZ92 1463 aa22.97■■□□□ 1.27
GCFC2-208ENST00000472230 GIGYF1O75420 1035 aaPredicted RBP22.97■■□□□ 1.27
GCFC2-208ENST00000472230 IL2RBP14784 551 aa22.97■■□□□ 1.27
GCFC2-208ENST00000472230 NPM2Q86SE8 214 aaKnown RBP22.97■■□□□ 1.27
GCFC2-208ENST00000472230 RPAP2Q8IXW5 612 aaPredicted RBP22.97■■□□□ 1.27
GCFC2-208ENST00000472230 NFATC2IPQ8NCF5 419 aa22.97■■□□□ 1.27
GCFC2-208ENST00000472230 PHAXQ9H814 394 aaKnown RBP22.97■■□□□ 1.27
GCFC2-208ENST00000472230 N4BP2Q86UW6 1770 aaPredicted RBP22.97■■□□□ 1.27
GCFC2-208ENST00000472230 NUCB1Q02818 461 aa22.96■■□□□ 1.27
GCFC2-208ENST00000472230 LARP1Q6PKG0 1096 aaKnown RBP22.96■■□□□ 1.27
GCFC2-208ENST00000472230 ZNF790Q6PG37 636 aa22.96■■□□□ 1.27
GCFC2-208ENST00000472230 SIRT2Q8IXJ6 389 aa22.96■■□□□ 1.27
GCFC2-208ENST00000472230 DBF4Q9UBU7 674 aaPredicted RBP22.96■■□□□ 1.27
GCFC2-208ENST00000472230 HEG1Q9ULI3 1381 aa22.95■■□□□ 1.27
GCFC2-208ENST00000472230 ANKRD44Q8N8A2 993 aa22.95■■□□□ 1.26
GCFC2-208ENST00000472230 MRC1P22897 1456 aa22.95■■□□□ 1.26
GCFC2-208ENST00000472230 COL22A1Q8NFW1 1626 aaPredicted RBP22.95■■□□□ 1.26
GCFC2-208ENST00000472230 CABP4P57796 275 aa22.94■■□□□ 1.26
GCFC2-208ENST00000472230 COL14A1Q05707 1796 aaKnown RBP22.94■■□□□ 1.26
GCFC2-208ENST00000472230 CHD1LQ86WJ1 897 aa22.94■■□□□ 1.26
GCFC2-208ENST00000472230 TTC5Q8N0Z6 440 aa22.94■■□□□ 1.26
GCFC2-208ENST00000472230 SLC39A6Q13433 755 aa22.93■■□□□ 1.26
GCFC2-208ENST00000472230 ANKRD45Q5TZF3 282 aa22.93■■□□□ 1.26
GCFC2-208ENST00000472230 GNAI3P08754 354 aa22.93■■□□□ 1.26
GCFC2-208ENST00000472230 BTG4Q9NY30 223 aa22.93■■□□□ 1.26
GCFC2-208ENST00000472230 CEP85Q6P2H3 762 aa22.92■■□□□ 1.26
GCFC2-208ENST00000472230 LNPKQ9C0E8 428 aa22.92■■□□□ 1.26
GCFC2-208ENST00000472230 ATP10DQ9P241 1426 aa22.92■■□□□ 1.26
GCFC2-208ENST00000472230 PHLPP1O60346 1717 aa22.92■■□□□ 1.26
GCFC2-208ENST00000472230 GNAI2P04899 355 aa22.91■■□□□ 1.26
GCFC2-208ENST00000472230 HMMRO75330 724 aa22.9■■□□□ 1.26
GCFC2-208ENST00000472230 ZBTB47Q9UFB7 747 aaPredicted RBP22.9■■□□□ 1.26
GCFC2-208ENST00000472230 ANXA1P04083 346 aa22.89■■□□□ 1.25
GCFC2-208ENST00000472230 C5P01031 1676 aa22.88■■□□□ 1.25
GCFC2-208ENST00000472230 PRAMEF22A3QJZ6 481 aa22.88■■□□□ 1.25
GCFC2-208ENST00000472230 SRCIN1Q9C0H9 1055 aa22.88■■□□□ 1.25
GCFC2-208ENST00000472230 DCTPP1Q9H773 170 aa22.88■■□□□ 1.25
GCFC2-208ENST00000472230 HYPKQ9NX55 129 aa22.88■■□□□ 1.25
GCFC2-208ENST00000472230 USP35Q9P2H5 1018 aa22.88■■□□□ 1.25
GCFC2-208ENST00000472230 DDX54Q8TDD1 881 aaKnown RBP22.88■■□□□ 1.25
GCFC2-208ENST00000472230 DNAAF4Q8WXU2 420 aa22.88■■□□□ 1.25
GCFC2-208ENST00000472230 FMNL2Q96PY5 1086 aa22.87■■□□□ 1.25
GCFC2-208ENST00000472230 PI4KAP2A4QPH2 592 aa22.87■■□□□ 1.25
GCFC2-208ENST00000472230 TOM1O60784 492 aa22.87■■□□□ 1.25
GCFC2-208ENST00000472230 PI4KAP1Q8N8J0 262 aa22.87■■□□□ 1.25
GCFC2-208ENST00000472230 SHANK3Q9BYB0 1731 aa22.87■■□□□ 1.25
GCFC2-208ENST00000472230 COL16A1Q07092 1604 aaPredicted RBP22.86■■□□□ 1.25
GCFC2-208ENST00000472230 ZNF496Q96IT1 587 aaPredicted RBP22.86■■□□□ 1.25
GCFC2-208ENST00000472230 DDX21Q9NR30 783 aaKnown RBP eCLIP22.86■■□□□ 1.25
GCFC2-208ENST00000472230 ERVV-2B6SEH9 535 aa22.85■■□□□ 1.25
GCFC2-208ENST00000472230 SNRPA1P09661 255 aaKnown RBP22.85■■□□□ 1.25
GCFC2-208ENST00000472230 IPO9Q96P70 1041 aaKnown RBP22.85■■□□□ 1.25
GCFC2-208ENST00000472230 UBTFL1P0CB47 393 aaPredicted RBP22.84■■□□□ 1.25
GCFC2-208ENST00000472230 NKX1-1Q15270 411 aaPredicted RBP22.84■■□□□ 1.25
GCFC2-208ENST00000472230 DDX58O95786 925 aaKnown RBP22.84■■□□□ 1.25
GCFC2-208ENST00000472230 PROSER3Q2NL68 480 aa22.84■■□□□ 1.25
GCFC2-208ENST00000472230 PIP4K2BP78356 416 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms