RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 KIF3CO14782 793 aa16.04■□□□□ 0.16
CLRN1-205ENST00000472224 COL23A1Q86Y22 540 aaPredicted RBP16.04■□□□□ 0.16
CLRN1-205ENST00000472224 C5P01031 1676 aa16.04■□□□□ 0.16
CLRN1-205ENST00000472224 IGSF1Q8N6C5 1336 aa16.03■□□□□ 0.16
CLRN1-205ENST00000472224 DDX10Q13206 875 aaKnown RBP16.03■□□□□ 0.16
CLRN1-205ENST00000472224 MSL1Q68DK7 614 aa16.03■□□□□ 0.16
CLRN1-205ENST00000472224 DNAJC5GQ8N7S2 189 aa16.03■□□□□ 0.16
CLRN1-205ENST00000472224 WDR90Q96KV7 1748 aa16.02■□□□□ 0.16
CLRN1-205ENST00000472224 PCDH11XQ9BZA7 1347 aa16.02■□□□□ 0.16
CLRN1-205ENST00000472224 PCDH11YQ9BZA8 1340 aa16.02■□□□□ 0.16
CLRN1-205ENST00000472224 TAF1LQ8IZX4 1826 aa16.01■□□□□ 0.15
CLRN1-205ENST00000472224 AEBP1Q8IUX7 1158 aa16■□□□□ 0.15
CLRN1-205ENST00000472224 SYTL4Q96C24 671 aaPredicted RBP16■□□□□ 0.15
CLRN1-205ENST00000472224 CD2APQ9Y5K6 639 aa16■□□□□ 0.15
CLRN1-205ENST00000472224 CICQ96RK0 1608 aaPredicted RBP16■□□□□ 0.15
CLRN1-205ENST00000472224 TOGARAM1Q9Y4F4 1720 aa15.99■□□□□ 0.15
CLRN1-205ENST00000472224 COL3A1P02461 1466 aaPredicted RBP15.99■□□□□ 0.15
CLRN1-205ENST00000472224 PCNTO95613 3336 aa15.99■□□□□ 0.15
CLRN1-205ENST00000472224 IL13P35225 146 aa15.99■□□□□ 0.15
CLRN1-205ENST00000472224 PRIM1P49642 420 aaKnown RBP15.99■□□□□ 0.15
CLRN1-205ENST00000472224 APLP1P51693 650 aa15.99■□□□□ 0.15
CLRN1-205ENST00000472224 SPG7Q9UQ90 795 aa15.99■□□□□ 0.15
CLRN1-205ENST00000472224 ITGB4P16144 1822 aa15.98■□□□□ 0.15
CLRN1-205ENST00000472224 DIAPH1O60610 1272 aaKnown RBP15.98■□□□□ 0.15
CLRN1-205ENST00000472224 COL13A1Q5TAT6 717 aaPredicted RBP15.98■□□□□ 0.15
CLRN1-205ENST00000472224 SULT6B1Q6IMI4 303 aa15.98■□□□□ 0.15
CLRN1-205ENST00000472224 CAPN15O75808 1086 aa15.97■□□□□ 0.15
CLRN1-205ENST00000472224 PPP2R1AP30153 589 aa15.97■□□□□ 0.15
CLRN1-205ENST00000472224 CFAP53Q96M91 514 aa15.97■□□□□ 0.15
CLRN1-205ENST00000472224 CCNL1Q9UK58 526 aaPredicted RBP15.97■□□□□ 0.15
CLRN1-205ENST00000472224 WWC3Q9ULE0 1092 aa15.97■□□□□ 0.15
CLRN1-205ENST00000472224 U2SURPO15042 1029 aaKnown RBP15.96■□□□□ 0.15
CLRN1-205ENST00000472224 CYP27B1O15528 508 aa15.96■□□□□ 0.15
CLRN1-205ENST00000472224 HMOX1P09601 288 aa15.96■□□□□ 0.15
CLRN1-205ENST00000472224 KIAA1551Q9HCM1 1747 aa15.94■□□□□ 0.14
CLRN1-205ENST00000472224 VIRMAQ69YN4 1812 aaKnown RBP15.94■□□□□ 0.14
CLRN1-205ENST00000472224 ZNF530Q6P9A1 599 aaPredicted RBP15.94■□□□□ 0.14
CLRN1-205ENST00000472224 UBR3Q6ZT12 1888 aa15.93■□□□□ 0.14
CLRN1-205ENST00000472224 KDRP35968 1356 aa15.93■□□□□ 0.14
CLRN1-205ENST00000472224 PLEKHO1Q53GL0 409 aaPredicted RBP15.93■□□□□ 0.14
CLRN1-205ENST00000472224 C4BP0C0L5 1744 aa15.93■□□□□ 0.14
CLRN1-205ENST00000472224 IFNL2Q8IZJ0 200 aa15.92■□□□□ 0.14
CLRN1-205ENST00000472224 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.92■□□□□ 0.14
CLRN1-205ENST00000472224 PLEKHG2Q9H7P9 1386 aa15.91■□□□□ 0.14
CLRN1-205ENST00000472224 PHKG2P15735 406 aa15.91■□□□□ 0.14
CLRN1-205ENST00000472224 C1orf141Q5JVX7 400 aa15.91■□□□□ 0.14
CLRN1-205ENST00000472224 AMIGO3Q86WK7 504 aa15.91■□□□□ 0.14
CLRN1-205ENST00000472224 ZNF316A6NFI3 1004 aaPredicted RBP15.9■□□□□ 0.14
CLRN1-205ENST00000472224 TOMM70O94826 608 aa15.9■□□□□ 0.14
CLRN1-205ENST00000472224 AMOTQ4VCS5 1084 aa15.9■□□□□ 0.14
CLRN1-205ENST00000472224 MPRIPQ6WCQ1 1025 aa15.9■□□□□ 0.14
CLRN1-205ENST00000472224 KIF13BQ9NQT8 1826 aa15.89■□□□□ 0.13
CLRN1-205ENST00000472224 HTRA3P83110 453 aa15.89■□□□□ 0.13
CLRN1-205ENST00000472224 NUDCQ9Y266 331 aa15.89■□□□□ 0.13
CLRN1-205ENST00000472224 N4BP2Q86UW6 1770 aaPredicted RBP15.89■□□□□ 0.13
CLRN1-205ENST00000472224 SCN11AQ9UI33 1791 aa15.89■□□□□ 0.13
CLRN1-205ENST00000472224 RALBP1Q15311 655 aa15.88■□□□□ 0.13
CLRN1-205ENST00000472224 JMYQ8N9B5 988 aa15.88■□□□□ 0.13
CLRN1-205ENST00000472224 ZNF219Q9P2Y4 722 aaPredicted RBP15.88■□□□□ 0.13
CLRN1-205ENST00000472224 HSP90AB1P08238 724 aaKnown RBP15.87■□□□□ 0.13
CLRN1-205ENST00000472224 U2AF1L5P0DN76 240 aaPredicted RBP15.87■□□□□ 0.13
CLRN1-205ENST00000472224 PRELPP51888 382 aa15.87■□□□□ 0.13
CLRN1-205ENST00000472224 U2AF1Q01081 240 aaKnown RBP eCLIP15.87■□□□□ 0.13
CLRN1-205ENST00000472224 NKX1-1Q15270 411 aaPredicted RBP15.87■□□□□ 0.13
CLRN1-205ENST00000472224 SMIM5Q71RC9 77 aa15.87■□□□□ 0.13
CLRN1-205ENST00000472224 KLRG1Q96E93 195 aa15.87■□□□□ 0.13
CLRN1-205ENST00000472224 NMRK2Q9NPI5 230 aa15.87■□□□□ 0.13
CLRN1-205ENST00000472224 TMOD3Q9NYL9 352 aa15.87■□□□□ 0.13
CLRN1-205ENST00000472224 KDM6AO15550 1401 aaPredicted RBP15.86■□□□□ 0.13
CLRN1-205ENST00000472224 BRCA1P38398 1863 aaKnown RBP15.85■□□□□ 0.13
CLRN1-205ENST00000472224 TNS4Q8IZW8 715 aa15.85■□□□□ 0.13
CLRN1-205ENST00000472224 FLAD1Q8NFF5 587 aa15.85■□□□□ 0.13
CLRN1-205ENST00000472224 PALLDQ8WX93 1383 aa15.85■□□□□ 0.13
CLRN1-205ENST00000472224 PXDNLA1KZ92 1463 aa15.84■□□□□ 0.13
CLRN1-205ENST00000472224 PRKAR2BP31323 418 aa15.84■□□□□ 0.13
CLRN1-205ENST00000472224 PIGBQ92521 554 aa15.84■□□□□ 0.13
CLRN1-205ENST00000472224 DCAF5Q96JK2 942 aa15.84■□□□□ 0.13
CLRN1-205ENST00000472224 MYBBP1AQ9BQG0 1328 aaKnown RBP15.84■□□□□ 0.13
CLRN1-205ENST00000472224 MTHFSDQ2M296 383 aaKnown RBP15.83■□□□□ 0.12
CLRN1-205ENST00000472224 AKAP4Q5JQC9 854 aa15.83■□□□□ 0.12
CLRN1-205ENST00000472224 CABP4P57796 275 aa15.82■□□□□ 0.12
CLRN1-205ENST00000472224 RSPH6AQ9H0K4 717 aa15.82■□□□□ 0.12
CLRN1-205ENST00000472224 PHF14O94880 888 aa15.81■□□□□ 0.12
CLRN1-205ENST00000472224 GAS2L2Q8NHY3 880 aa15.81■□□□□ 0.12
CLRN1-205ENST00000472224 RBM46Q8TBY0 533 aaKnown RBP15.81■□□□□ 0.12
CLRN1-205ENST00000472224 SMARCC1Q92922 1105 aaPredicted RBP15.81■□□□□ 0.12
CLRN1-205ENST00000472224 ERVV-2B6SEH9 535 aa15.8■□□□□ 0.12
CLRN1-205ENST00000472224 ASAP1Q9ULH1 1129 aa15.8■□□□□ 0.12
CLRN1-205ENST00000472224 DLG5Q8TDM6 1919 aa15.8■□□□□ 0.12
CLRN1-205ENST00000472224 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.79■□□□□ 0.12
CLRN1-205ENST00000472224 AK7Q96M32 723 aa15.79■□□□□ 0.12
CLRN1-205ENST00000472224 PRKRIP1Q9H875 184 aaPredicted RBP15.79■□□□□ 0.12
CLRN1-205ENST00000472224 ADAMTS7Q9UKP4 1686 aa15.79■□□□□ 0.12
CLRN1-205ENST00000472224 MRC1P22897 1456 aa15.78■□□□□ 0.12
CLRN1-205ENST00000472224 ARFGEF1Q9Y6D6 1849 aa15.78■□□□□ 0.12
CLRN1-205ENST00000472224 RNMTO43148 476 aaKnown RBP15.78■□□□□ 0.12
CLRN1-205ENST00000472224 PHACTR3Q96KR7 559 aa15.78■□□□□ 0.12
CLRN1-205ENST00000472224 LGR6Q9HBX8 967 aa15.78■□□□□ 0.12
CLRN1-205ENST00000472224 TNRC6CQ9HCJ0 1690 aaKnown RBP15.78■□□□□ 0.12
CLRN1-205ENST00000472224 FCHSD2O94868 740 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms