RNA–Protein interactions for RNA: ENST00000472006.1

FUBP3-204, Transcript of far upstream element binding protein 3, humanhuman

TSL 2

Gene FUBP3, Length 284 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP3-204ENST00000472006 ATG3Q9NT62 314 aa13.09□□□□□ -0.31
FUBP3-204ENST00000472006 TJP1Q07157 1748 aa13.08□□□□□ -0.32
FUBP3-204ENST00000472006 LOC102724428A0A0B4J2F2 783 aa13.08□□□□□ -0.32
FUBP3-204ENST00000472006 FCHSD2O94868 740 aa13.08□□□□□ -0.32
FUBP3-204ENST00000472006 SIK1P57059 783 aa13.08□□□□□ -0.32
FUBP3-204ENST00000472006 GAS2L2Q8NHY3 880 aa13.08□□□□□ -0.32
FUBP3-204ENST00000472006 PDGFDQ9GZP0 370 aaPredicted RBP13.08□□□□□ -0.32
FUBP3-204ENST00000472006 SPON1Q9HCB6 807 aa13.08□□□□□ -0.32
FUBP3-204ENST00000472006 MAP3K5Q99683 1374 aa13.07□□□□□ -0.32
FUBP3-204ENST00000472006 RNMTO43148 476 aaKnown RBP13.07□□□□□ -0.32
FUBP3-204ENST00000472006 U2AF1L5P0DN76 240 aaPredicted RBP13.07□□□□□ -0.32
FUBP3-204ENST00000472006 PRKAR2BP31323 418 aa13.07□□□□□ -0.32
FUBP3-204ENST00000472006 U2AF1Q01081 240 aaKnown RBP eCLIP13.07□□□□□ -0.32
FUBP3-204ENST00000472006 NFATC2IPQ8NCF5 419 aa13.07□□□□□ -0.32
FUBP3-204ENST00000472006 SLC52A2Q9HAB3 445 aa13.07□□□□□ -0.32
FUBP3-204ENST00000472006 LGR6Q9HBX8 967 aa13.07□□□□□ -0.32
FUBP3-204ENST00000472006 PNPLA7Q6ZV29 1317 aa13.07□□□□□ -0.32
FUBP3-204ENST00000472006 MYBBP1AQ9BQG0 1328 aaKnown RBP13.07□□□□□ -0.32
FUBP3-204ENST00000472006 SLC16A10Q8TF71 515 aa13.06□□□□□ -0.32
FUBP3-204ENST00000472006 MTFR1LQ9H019 292 aa13.06□□□□□ -0.32
FUBP3-204ENST00000472006 TFCP2L1Q9NZI6 479 aa13.06□□□□□ -0.32
FUBP3-204ENST00000472006 MYH14Q7Z406 1995 aaKnown RBP13.05□□□□□ -0.32
FUBP3-204ENST00000472006 GNAT3A8MTJ3 354 aa13.05□□□□□ -0.32
FUBP3-204ENST00000472006 PHACTR3Q96KR7 559 aa13.05□□□□□ -0.32
FUBP3-204ENST00000472006 ZBTB7AO95365 584 aa13.04□□□□□ -0.32
FUBP3-204ENST00000472006 ATP6V1AP38606 617 aa13.04□□□□□ -0.32
FUBP3-204ENST00000472006 ITPK1Q13572 414 aa13.04□□□□□ -0.32
FUBP3-204ENST00000472006 LINC00116Q8NCU8 138 aa13.04□□□□□ -0.32
FUBP3-204ENST00000472006 FLAD1Q8NFF5 587 aa13.04□□□□□ -0.32
FUBP3-204ENST00000472006 CEMIPQ8WUJ3 1361 aa13.04□□□□□ -0.32
FUBP3-204ENST00000472006 KCPQ6ZWJ8 1503 aa13.03□□□□□ -0.32
FUBP3-204ENST00000472006 ZNF316A6NFI3 1004 aaPredicted RBP13.03□□□□□ -0.32
FUBP3-204ENST00000472006 PTGER2P43116 358 aa13.03□□□□□ -0.32
FUBP3-204ENST00000472006 SLC4A9Q96Q91 983 aa13.03□□□□□ -0.32
FUBP3-204ENST00000472006 SGIP1Q9BQI5 828 aa13.03□□□□□ -0.32
FUBP3-204ENST00000472006 PRKRIP1Q9H875 184 aaPredicted RBP13.03□□□□□ -0.32
FUBP3-204ENST00000472006 C4AP0C0L4 1744 aa13.02□□□□□ -0.32
FUBP3-204ENST00000472006 IL17REQ8NFR9 667 aa13.02□□□□□ -0.33
FUBP3-204ENST00000472006 AK7Q96M32 723 aa13.02□□□□□ -0.33
FUBP3-204ENST00000472006 RBM42Q9BTD8 480 aaKnown RBP13.02□□□□□ -0.33
FUBP3-204ENST00000472006 PNNQ9H307 717 aaKnown RBP13.02□□□□□ -0.33
FUBP3-204ENST00000472006 COL23A1Q86Y22 540 aaPredicted RBP13.01□□□□□ -0.33
FUBP3-204ENST00000472006 PLEKHF1Q96S99 279 aa13.01□□□□□ -0.33
FUBP3-204ENST00000472006 ATF5Q9Y2D1 282 aaPredicted RBP13.01□□□□□ -0.33
FUBP3-204ENST00000472006 CNTNAP4Q9C0A0 1308 aa13.01□□□□□ -0.33
FUBP3-204ENST00000472006 HTATSF1O43719 755 aaKnown RBP13□□□□□ -0.33
FUBP3-204ENST00000472006 SSFA2P28290 1259 aa13□□□□□ -0.33
FUBP3-204ENST00000472006 RC3H1Q5TC82 1133 aaKnown RBP13□□□□□ -0.33
FUBP3-204ENST00000472006 PPP1R1BQ9UD71 204 aaPredicted RBP13□□□□□ -0.33
FUBP3-204ENST00000472006 PTCD1O75127 700 aaKnown RBP12.99□□□□□ -0.33
FUBP3-204ENST00000472006 NEFMP07197 916 aa12.99□□□□□ -0.33
FUBP3-204ENST00000472006 TEFQ10587 303 aa12.99□□□□□ -0.33
FUBP3-204ENST00000472006 AMIGO3Q86WK7 504 aa12.99□□□□□ -0.33
FUBP3-204ENST00000472006 KDM3BQ7LBC6 1761 aa12.99□□□□□ -0.33
FUBP3-204ENST00000472006 SLC39A6Q13433 755 aa12.98□□□□□ -0.33
FUBP3-204ENST00000472006 VSIG10Q8N0Z9 540 aa12.98□□□□□ -0.33
FUBP3-204ENST00000472006 RTF1Q92541 710 aaKnown RBP12.98□□□□□ -0.33
FUBP3-204ENST00000472006 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.97□□□□□ -0.33
FUBP3-204ENST00000472006 GNPATO15228 680 aa12.97□□□□□ -0.33
FUBP3-204ENST00000472006 MSH5O43196 834 aa12.97□□□□□ -0.33
FUBP3-204ENST00000472006 MAPK8IP3Q9UPT6 1336 aa12.96□□□□□ -0.33
FUBP3-204ENST00000472006 RPS6KA4O75676 772 aa12.96□□□□□ -0.33
FUBP3-204ENST00000472006 PHF14O94880 888 aa12.96□□□□□ -0.33
FUBP3-204ENST00000472006 ADRA2BP18089 450 aa12.96□□□□□ -0.33
FUBP3-204ENST00000472006 POLD1P28340 1107 aa12.96□□□□□ -0.33
FUBP3-204ENST00000472006 NFE2L2Q16236 605 aa12.96□□□□□ -0.33
FUBP3-204ENST00000472006 ZNF790Q6PG37 636 aa12.96□□□□□ -0.33
FUBP3-204ENST00000472006 TTC5Q8N0Z6 440 aa12.96□□□□□ -0.33
FUBP3-204ENST00000472006 ARXQ96QS3 562 aa12.96□□□□□ -0.33
FUBP3-204ENST00000472006 RTCBQ9Y3I0 505 aaKnown RBP12.96□□□□□ -0.33
FUBP3-204ENST00000472006 LAMB4A4D0S4 1761 aa12.96□□□□□ -0.34
FUBP3-204ENST00000472006 CRKLP46109 303 aaKnown RBP12.95□□□□□ -0.34
FUBP3-204ENST00000472006 MCM10Q7L590 875 aa12.95□□□□□ -0.34
FUBP3-204ENST00000472006 HEG1Q9ULI3 1381 aa12.94□□□□□ -0.34
FUBP3-204ENST00000472006 BTBD11A6QL63 1104 aa12.94□□□□□ -0.34
FUBP3-204ENST00000472006 TRAPPC3LQ5T215 181 aa12.94□□□□□ -0.34
FUBP3-204ENST00000472006 DNAJC10Q8IXB1 793 aa12.94□□□□□ -0.34
FUBP3-204ENST00000472006 KIF13BQ9NQT8 1826 aa12.94□□□□□ -0.34
FUBP3-204ENST00000472006 CYP19A1P11511 503 aaPredicted RBP12.93□□□□□ -0.34
FUBP3-204ENST00000472006 DCTN1Q14203 1278 aa12.93□□□□□ -0.34
FUBP3-204ENST00000472006 WDR43Q15061 677 aaKnown RBP eCLIP12.93□□□□□ -0.34
FUBP3-204ENST00000472006 INTS5Q6P9B9 1019 aaKnown RBP12.93□□□□□ -0.34
FUBP3-204ENST00000472006 SMIM5Q71RC9 77 aa12.93□□□□□ -0.34
FUBP3-204ENST00000472006 ZNF496Q96IT1 587 aaPredicted RBP12.93□□□□□ -0.34
FUBP3-204ENST00000472006 TEX13AQ9BXU3 409 aaPredicted RBP12.93□□□□□ -0.34
FUBP3-204ENST00000472006 FHDC1Q9C0D6 1143 aaPredicted RBP12.93□□□□□ -0.34
FUBP3-204ENST00000472006 CCDC87Q9NVE4 849 aa12.93□□□□□ -0.34
FUBP3-204ENST00000472006 ARHGEF1Q92888 912 aaKnown RBP12.92□□□□□ -0.34
FUBP3-204ENST00000472006 FMNL2Q96PY5 1086 aa12.92□□□□□ -0.34
FUBP3-204ENST00000472006 SYT17Q9BSW7 474 aa12.92□□□□□ -0.34
FUBP3-204ENST00000472006 TAF7Q15545 349 aaPredicted RBP12.91□□□□□ -0.34
FUBP3-204ENST00000472006 MSL1Q68DK7 614 aa12.91□□□□□ -0.34
FUBP3-204ENST00000472006 RUNDC1Q96C34 613 aa12.91□□□□□ -0.34
FUBP3-204ENST00000472006 ADAMTS8Q9UP79 889 aa12.91□□□□□ -0.34
FUBP3-204ENST00000472006 SOS1Q07889 1333 aaPredicted RBP12.9□□□□□ -0.34
FUBP3-204ENST00000472006 SCN7AQ01118 1682 aa12.9□□□□□ -0.34
FUBP3-204ENST00000472006 BCORQ6W2J9 1755 aa12.9□□□□□ -0.34
FUBP3-204ENST00000472006 KCNQ3O43525 872 aa12.9□□□□□ -0.34
FUBP3-204ENST00000472006 STARD3NLO95772 234 aa12.9□□□□□ -0.34
FUBP3-204ENST00000472006 RFC4P35249 363 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms