RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 IL13P35225 146 aa12.89□□□□□ -0.35
GGPS1-204ENST00000471812 MTHFSP49914 203 aa12.89□□□□□ -0.35
GGPS1-204ENST00000471812 PCDH11XQ9BZA7 1347 aa12.88□□□□□ -0.35
GGPS1-204ENST00000471812 PCDH11YQ9BZA8 1340 aa12.88□□□□□ -0.35
GGPS1-204ENST00000471812 SMIM5Q71RC9 77 aa12.87□□□□□ -0.35
GGPS1-204ENST00000471812 KDM6AO15550 1401 aaPredicted RBP12.87□□□□□ -0.35
GGPS1-204ENST00000471812 C5P01031 1676 aa12.86□□□□□ -0.35
GGPS1-204ENST00000471812 PHKG2P15735 406 aa12.86□□□□□ -0.35
GGPS1-204ENST00000471812 ZBTB7AO95365 584 aa12.85□□□□□ -0.35
GGPS1-204ENST00000471812 HMOX1P09601 288 aa12.85□□□□□ -0.35
GGPS1-204ENST00000471812 SLC15A2Q16348 729 aa12.85□□□□□ -0.35
GGPS1-204ENST00000471812 SULT6B1Q6IMI4 303 aa12.85□□□□□ -0.35
GGPS1-204ENST00000471812 MPRIPQ6WCQ1 1025 aa12.85□□□□□ -0.35
GGPS1-204ENST00000471812 AMIGO3Q86WK7 504 aa12.85□□□□□ -0.35
GGPS1-204ENST00000471812 PIGBQ92521 554 aa12.85□□□□□ -0.35
GGPS1-204ENST00000471812 SCN11AQ9UI33 1791 aa12.84□□□□□ -0.35
GGPS1-204ENST00000471812 KDRP35968 1356 aa12.84□□□□□ -0.35
GGPS1-204ENST00000471812 NPC1L1Q9UHC9 1359 aa12.84□□□□□ -0.35
GGPS1-204ENST00000471812 NKX1-1Q15270 411 aaPredicted RBP12.84□□□□□ -0.35
GGPS1-204ENST00000471812 NBPF14Q5TI25 921 aa12.84□□□□□ -0.35
GGPS1-204ENST00000471812 QSER1Q2KHR3 1735 aa12.84□□□□□ -0.35
GGPS1-204ENST00000471812 ZNF530Q6P9A1 599 aaPredicted RBP12.82□□□□□ -0.36
GGPS1-204ENST00000471812 STK32BQ9NY57 414 aa12.82□□□□□ -0.36
GGPS1-204ENST00000471812 ASAP1Q9ULH1 1129 aa12.82□□□□□ -0.36
GGPS1-204ENST00000471812 SPG7Q9UQ90 795 aa12.82□□□□□ -0.36
GGPS1-204ENST00000471812 PALLDQ8WX93 1383 aa12.81□□□□□ -0.36
GGPS1-204ENST00000471812 UBR3Q6ZT12 1888 aa12.81□□□□□ -0.36
GGPS1-204ENST00000471812 PTGER2P43116 358 aa12.81□□□□□ -0.36
GGPS1-204ENST00000471812 SLC4A9Q96Q91 983 aa12.81□□□□□ -0.36
GGPS1-204ENST00000471812 CCNL1Q9UK58 526 aaPredicted RBP12.81□□□□□ -0.36
GGPS1-204ENST00000471812 PNPLA7Q6ZV29 1317 aa12.81□□□□□ -0.36
GGPS1-204ENST00000471812 C4BP0C0L5 1744 aa12.8□□□□□ -0.36
GGPS1-204ENST00000471812 PPP2R1AP30153 589 aa12.8□□□□□ -0.36
GGPS1-204ENST00000471812 IFNL2Q8IZJ0 200 aa12.8□□□□□ -0.36
GGPS1-204ENST00000471812 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.8□□□□□ -0.361e-6■□□□□ 8.4
GGPS1-204ENST00000471812 MYH14Q7Z406 1995 aaKnown RBP12.8□□□□□ -0.36
GGPS1-204ENST00000471812 COL24A1Q17RW2 1714 aa12.79□□□□□ -0.36
GGPS1-204ENST00000471812 PLCB2Q00722 1185 aa12.79□□□□□ -0.36
GGPS1-204ENST00000471812 ITPK1Q13572 414 aa12.79□□□□□ -0.36
GGPS1-204ENST00000471812 LGR6Q9HBX8 967 aa12.79□□□□□ -0.36
GGPS1-204ENST00000471812 ATG3Q9NT62 314 aa12.79□□□□□ -0.36
GGPS1-204ENST00000471812 ADAMTS7Q9UKP4 1686 aa12.78□□□□□ -0.36
GGPS1-204ENST00000471812 DIAPH1O60610 1272 aaKnown RBP12.78□□□□□ -0.36
GGPS1-204ENST00000471812 PLEKHO1Q53GL0 409 aaPredicted RBP12.78□□□□□ -0.36
GGPS1-204ENST00000471812 LINC00116Q8NCU8 138 aa12.78□□□□□ -0.36
GGPS1-204ENST00000471812 SGIP1Q9BQI5 828 aa12.78□□□□□ -0.36
GGPS1-204ENST00000471812 COL5A3P25940 1745 aaPredicted RBP12.78□□□□□ -0.36
GGPS1-204ENST00000471812 TJP1Q07157 1748 aa12.77□□□□□ -0.36
GGPS1-204ENST00000471812 ECM2O94769 699 aaPredicted RBP12.77□□□□□ -0.37
GGPS1-204ENST00000471812 PRR29P0C7W0 189 aa12.77□□□□□ -0.37
GGPS1-204ENST00000471812 MTHFSDQ2M296 383 aaKnown RBP12.77□□□□□ -0.37
GGPS1-204ENST00000471812 SLC27A3Q5K4L6 730 aa12.77□□□□□ -0.37
GGPS1-204ENST00000471812 CHADLQ6NUI6 762 aa12.77□□□□□ -0.37
GGPS1-204ENST00000471812 TMOD3Q9NYL9 352 aa12.77□□□□□ -0.37
GGPS1-204ENST00000471812 U2SURPO15042 1029 aaKnown RBP12.76□□□□□ -0.37
GGPS1-204ENST00000471812 DDX10Q13206 875 aaKnown RBP12.76□□□□□ -0.37
GGPS1-204ENST00000471812 COL23A1Q86Y22 540 aaPredicted RBP12.76□□□□□ -0.37
GGPS1-204ENST00000471812 PHACTR3Q96KR7 559 aa12.76□□□□□ -0.37
GGPS1-204ENST00000471812 SPON1Q9HCB6 807 aa12.76□□□□□ -0.37
GGPS1-204ENST00000471812 SIPA1L3O60292 1781 aaPredicted RBP12.75□□□□□ -0.37
GGPS1-204ENST00000471812 LOC102724428A0A0B4J2F2 783 aa12.74□□□□□ -0.37
GGPS1-204ENST00000471812 C19orf67A6NJJ6 358 aa12.74□□□□□ -0.37
GGPS1-204ENST00000471812 SIK1P57059 783 aa12.74□□□□□ -0.37
GGPS1-204ENST00000471812 MSL1Q68DK7 614 aa12.74□□□□□ -0.37
GGPS1-204ENST00000471812 TFCP2L1Q9NZI6 479 aa12.74□□□□□ -0.37
GGPS1-204ENST00000471812 DLG5Q8TDM6 1919 aa12.74□□□□□ -0.37
GGPS1-204ENST00000471812 MRC1P22897 1456 aa12.73□□□□□ -0.37
GGPS1-204ENST00000471812 PLEKHG2Q9H7P9 1386 aa12.73□□□□□ -0.37
GGPS1-204ENST00000471812 AMOTQ4VCS5 1084 aa12.73□□□□□ -0.37
GGPS1-204ENST00000471812 NFATC2IPQ8NCF5 419 aa12.73□□□□□ -0.37
GGPS1-204ENST00000471812 DCAF5Q96JK2 942 aa12.73□□□□□ -0.37
GGPS1-204ENST00000471812 RSPH6AQ9H0K4 717 aa12.73□□□□□ -0.37
GGPS1-204ENST00000471812 C4AP0C0L4 1744 aa12.72□□□□□ -0.37
GGPS1-204ENST00000471812 ERVV-2B6SEH9 535 aa12.72□□□□□ -0.37
GGPS1-204ENST00000471812 RGL2O15211 777 aa12.72□□□□□ -0.37
GGPS1-204ENST00000471812 RNMTO43148 476 aaKnown RBP12.72□□□□□ -0.37
GGPS1-204ENST00000471812 SLC39A6Q13433 755 aa12.72□□□□□ -0.37
GGPS1-204ENST00000471812 MTFR1LQ9H019 292 aa12.72□□□□□ -0.37
GGPS1-204ENST00000471812 KCPQ6ZWJ8 1503 aa12.72□□□□□ -0.37
GGPS1-204ENST00000471812 UBR2Q8IWV8 1755 aa12.71□□□□□ -0.37
GGPS1-204ENST00000471812 ZNF831Q5JPB2 1677 aa12.71□□□□□ -0.37
GGPS1-204ENST00000471812 PTCD1O75127 700 aaKnown RBP12.71□□□□□ -0.37
GGPS1-204ENST00000471812 PHF14O94880 888 aa12.71□□□□□ -0.37
GGPS1-204ENST00000471812 PRKAR2BP31323 418 aa12.71□□□□□ -0.37
GGPS1-204ENST00000471812 ATP6V1AP38606 617 aa12.71□□□□□ -0.37
GGPS1-204ENST00000471812 CABP4P57796 275 aa12.71□□□□□ -0.37
GGPS1-204ENST00000471812 C1orf141Q5JVX7 400 aa12.71□□□□□ -0.37
GGPS1-204ENST00000471812 SMARCC1Q92922 1105 aaPredicted RBP12.71□□□□□ -0.37
GGPS1-204ENST00000471812 AKAP4Q5JQC9 854 aa12.7□□□□□ -0.38
GGPS1-204ENST00000471812 IL17REQ8NFR9 667 aa12.7□□□□□ -0.38
GGPS1-204ENST00000471812 FHDC1Q9C0D6 1143 aaPredicted RBP12.7□□□□□ -0.38
GGPS1-204ENST00000471812 PPP1R1BQ9UD71 204 aaPredicted RBP12.69□□□□□ -0.38
GGPS1-204ENST00000471812 CICQ96RK0 1608 aaPredicted RBP12.69□□□□□ -0.38
GGPS1-204ENST00000471812 KCNQ3O43525 872 aa12.68□□□□□ -0.38
GGPS1-204ENST00000471812 HSP90AB1P08238 724 aaKnown RBP12.68□□□□□ -0.38
GGPS1-204ENST00000471812 U2AF1L5P0DN76 240 aaPredicted RBP12.68□□□□□ -0.38
GGPS1-204ENST00000471812 U2AF1Q01081 240 aaKnown RBP eCLIP12.68□□□□□ -0.38
GGPS1-204ENST00000471812 SLC52A2Q9HAB3 445 aa12.68□□□□□ -0.38
GGPS1-204ENST00000471812 ZBTB47Q9UFB7 747 aaPredicted RBP12.68□□□□□ -0.38
GGPS1-204ENST00000471812 MAP3K5Q99683 1374 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms