RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 MBIPQ9NS73 344 aa25.01■■□□□ 1.59
PSPC1-203ENST00000471658 ERVV-2B6SEH9 535 aa25■■□□□ 1.59
PSPC1-203ENST00000471658 ACSBG1Q96GR2 724 aa25■■□□□ 1.59
PSPC1-203ENST00000471658 TOGARAM1Q9Y4F4 1720 aa25■■□□□ 1.59
PSPC1-203ENST00000471658 FANCIQ9NVI1 1328 aa24.99■■□□□ 1.59
PSPC1-203ENST00000471658 MYH16Q9H6N6 1097 aa24.98■■□□□ 1.59
PSPC1-203ENST00000471658 TSPYL4Q9UJ04 414 aa24.98■■□□□ 1.59
PSPC1-203ENST00000471658 RGS12O14924 1447 aa24.98■■□□□ 1.59
PSPC1-203ENST00000471658 KCNQ3O43525 872 aa24.97■■□□□ 1.59
PSPC1-203ENST00000471658 PRIM1P49642 420 aaKnown RBP24.97■■□□□ 1.59
PSPC1-203ENST00000471658 KRT27Q7Z3Y8 459 aa24.97■■□□□ 1.59
PSPC1-203ENST00000471658 BRWD3Q6RI45 1802 aa24.97■■□□□ 1.59
PSPC1-203ENST00000471658 BTBD11A6QL63 1104 aa24.97■■□□□ 1.59
PSPC1-203ENST00000471658 MRC1P22897 1456 aa24.96■■□□□ 1.59
PSPC1-203ENST00000471658 SYTL4Q96C24 671 aaPredicted RBP24.96■■□□□ 1.59
PSPC1-203ENST00000471658 KCNQ2O43526 872 aa24.95■■□□□ 1.58
PSPC1-203ENST00000471658 SLC39A6Q13433 755 aa24.95■■□□□ 1.58
PSPC1-203ENST00000471658 PIGBQ92521 554 aa24.95■■□□□ 1.58
PSPC1-203ENST00000471658 SIPA1L3O60292 1781 aaPredicted RBP24.94■■□□□ 1.58
PSPC1-203ENST00000471658 EXOSC9Q06265 439 aaKnown RBP24.94■■□□□ 1.58
PSPC1-203ENST00000471658 TMOD3Q9NYL9 352 aa24.94■■□□□ 1.58
PSPC1-203ENST00000471658 DOT1LQ8TEK3 1739 aa24.93■■□□□ 1.58
PSPC1-203ENST00000471658 KRT24Q2M2I5 525 aa24.93■■□□□ 1.58
PSPC1-203ENST00000471658 PTF1AQ7RTS3 328 aa24.92■■□□□ 1.58
PSPC1-203ENST00000471658 BABAM1Q9NWV8 329 aa24.92■■□□□ 1.58
PSPC1-203ENST00000471658 KAT6BQ8WYB5 2073 aa24.91■■□□□ 1.58
PSPC1-203ENST00000471658 ITGB4P16144 1822 aa24.9■■□□□ 1.58
PSPC1-203ENST00000471658 ELL2O00472 640 aaPredicted RBP24.9■■□□□ 1.58
PSPC1-203ENST00000471658 TSPYL6Q8N831 410 aa24.9■■□□□ 1.58
PSPC1-203ENST00000471658 C8orf58Q8NAV2 365 aa24.9■■□□□ 1.58
PSPC1-203ENST00000471658 BCL9O00512 1426 aa24.89■■□□□ 1.58
PSPC1-203ENST00000471658 CENPBP07199 599 aaPredicted RBP24.89■■□□□ 1.57
PSPC1-203ENST00000471658 ZNF790Q6PG37 636 aa24.89■■□□□ 1.57
PSPC1-203ENST00000471658 ASAP1Q9ULH1 1129 aa24.89■■□□□ 1.57
PSPC1-203ENST00000471658 EIF4A1P60842 406 aaKnown RBP24.88■■□□□ 1.57
PSPC1-203ENST00000471658 KDM3BQ7LBC6 1761 aa24.87■■□□□ 1.57
PSPC1-203ENST00000471658 ATG3Q9NT62 314 aa24.86■■□□□ 1.57
PSPC1-203ENST00000471658 FAM196AQ6ZSG2 479 aa24.86■■□□□ 1.57
PSPC1-203ENST00000471658 TTC5Q8N0Z6 440 aa24.84■■□□□ 1.57
PSPC1-203ENST00000471658 ZNF496Q96IT1 587 aaPredicted RBP24.84■■□□□ 1.57
PSPC1-203ENST00000471658 PTCD1O75127 700 aaKnown RBP24.83■■□□□ 1.56
PSPC1-203ENST00000471658 PRAMEF22A3QJZ6 481 aa24.82■■□□□ 1.56
PSPC1-203ENST00000471658 VAMP4O75379 141 aa24.82■■□□□ 1.56
PSPC1-203ENST00000471658 TWISTNBQ3B726 338 aaPredicted RBP24.82■■□□□ 1.56
PSPC1-203ENST00000471658 SBF2Q86WG5 1849 aa24.8■■□□□ 1.56
PSPC1-203ENST00000471658 TRIM37O94972 964 aa24.8■■□□□ 1.56
PSPC1-203ENST00000471658 PAPPAQ13219 1627 aa24.8■■□□□ 1.56
PSPC1-203ENST00000471658 HEG1Q9ULI3 1381 aa24.8■■□□□ 1.56
PSPC1-203ENST00000471658 NHSQ6T4R5 1651 aa24.79■■□□□ 1.56
PSPC1-203ENST00000471658 FMNL2Q96PY5 1086 aa24.79■■□□□ 1.56
PSPC1-203ENST00000471658 BCL11BQ9C0K0 894 aaPredicted RBP24.79■■□□□ 1.56
PSPC1-203ENST00000471658 KCPQ6ZWJ8 1503 aa24.78■■□□□ 1.56
PSPC1-203ENST00000471658 GIGYF1O75420 1035 aaPredicted RBP24.78■■□□□ 1.56
PSPC1-203ENST00000471658 RBM42Q9BTD8 480 aaKnown RBP24.78■■□□□ 1.56
PSPC1-203ENST00000471658 EP400Q96L91 3159 aa24.77■■□□□ 1.56
PSPC1-203ENST00000471658 TCERG1O14776 1098 aaKnown RBP24.77■■□□□ 1.56
PSPC1-203ENST00000471658 RCAN3Q9UKA8 241 aa24.77■■□□□ 1.56
PSPC1-203ENST00000471658 NECTIN2Q92692 538 aa24.76■■□□□ 1.55
PSPC1-203ENST00000471658 SLC4A9Q96Q91 983 aa24.76■■□□□ 1.55
PSPC1-203ENST00000471658 UBR2Q8IWV8 1755 aa24.75■■□□□ 1.55
PSPC1-203ENST00000471658 BTAF1O14981 1849 aa24.74■■□□□ 1.55
PSPC1-203ENST00000471658 EIF2S2P20042 333 aaKnown RBP24.74■■□□□ 1.55
PSPC1-203ENST00000471658 RARSP54136 660 aaKnown RBP24.74■■□□□ 1.55
PSPC1-203ENST00000471658 BCL2L13Q9BXK5 485 aa24.74■■□□□ 1.55
PSPC1-203ENST00000471658 USP16Q9Y5T5 823 aa24.74■■□□□ 1.55
PSPC1-203ENST00000471658 PALLDQ8WX93 1383 aa24.74■■□□□ 1.55
PSPC1-203ENST00000471658 BCAR3O75815 825 aa24.73■■□□□ 1.55
PSPC1-203ENST00000471658 SNRPA1P09661 255 aaKnown RBP24.73■■□□□ 1.55
PSPC1-203ENST00000471658 CT47B1P0C2W7 299 aaPredicted RBP24.73■■□□□ 1.55
PSPC1-203ENST00000471658 SMARCC1Q92922 1105 aaPredicted RBP24.72■■□□□ 1.55
PSPC1-203ENST00000471658 SSH1Q8WYL5 1049 aa24.72■■□□□ 1.55
PSPC1-203ENST00000471658 C5P01031 1676 aa24.7■■□□□ 1.54
PSPC1-203ENST00000471658 LOC102724428A0A0B4J2F2 783 aa24.7■■□□□ 1.54
PSPC1-203ENST00000471658 HOXB7P09629 217 aa24.7■■□□□ 1.54
PSPC1-203ENST00000471658 KCNQ4P56696 695 aa24.7■■□□□ 1.54
PSPC1-203ENST00000471658 SIK1P57059 783 aa24.7■■□□□ 1.54
PSPC1-203ENST00000471658 HDGFL1Q5TGJ6 251 aa24.7■■□□□ 1.54
PSPC1-203ENST00000471658 DNAJC10Q8IXB1 793 aa24.7■■□□□ 1.54
PSPC1-203ENST00000471658 SUPT16HQ9Y5B9 1047 aaKnown RBP24.69■■□□□ 1.54
PSPC1-203ENST00000471658 VSIG10Q8N0Z9 540 aa24.68■■□□□ 1.54
PSPC1-203ENST00000471658 SOS1Q07889 1333 aaPredicted RBP24.68■■□□□ 1.54
PSPC1-203ENST00000471658 ATP6V1AP38606 617 aa24.67■■□□□ 1.54
PSPC1-203ENST00000471658 ITPK1Q13572 414 aa24.67■■□□□ 1.54
PSPC1-203ENST00000471658 SMC4Q9NTJ3 1288 aa24.67■■□□□ 1.54
PSPC1-203ENST00000471658 APBA3O96018 575 aa24.66■■□□□ 1.54
PSPC1-203ENST00000471658 ALDH1L2Q3SY69 923 aa24.66■■□□□ 1.54
PSPC1-203ENST00000471658 CCDC30Q5VVM6 783 aa24.66■■□□□ 1.54
PSPC1-203ENST00000471658 MRPL50Q8N5N7 158 aaKnown RBP24.66■■□□□ 1.54
PSPC1-203ENST00000471658 ANXA1P04083 346 aa24.65■■□□□ 1.54
PSPC1-203ENST00000471658 PIP4K2AP48426 406 aaPredicted RBP24.65■■□□□ 1.54
PSPC1-203ENST00000471658 ZNF428Q96B54 188 aa24.65■■□□□ 1.54
PSPC1-203ENST00000471658 A1BGP04217 495 aa24.64■■□□□ 1.54
PSPC1-203ENST00000471658 CHPF2Q9P2E5 772 aa24.64■■□□□ 1.54
PSPC1-203ENST00000471658 SLC4A2P04920 1241 aa24.64■■□□□ 1.53
PSPC1-203ENST00000471658 PLIN1O60240 522 aa24.63■■□□□ 1.53
PSPC1-203ENST00000471658 PDIA6Q15084 440 aa24.63■■□□□ 1.53
PSPC1-203ENST00000471658 PROSER3Q2NL68 480 aa24.63■■□□□ 1.53
PSPC1-203ENST00000471658 CYP19A1P11511 503 aaPredicted RBP24.62■■□□□ 1.53
PSPC1-203ENST00000471658 G2E3Q7L622 706 aa24.62■■□□□ 1.53
PSPC1-203ENST00000471658 TEX13AQ9BXU3 409 aaPredicted RBP24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms