RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 USP17L5A8MUK1 530 aa7.05□□□□□ -1.28
COPS3-206ENST00000471414 PPARGC1BQ86YN6 1023 aaKnown RBP7.05□□□□□ -1.28
COPS3-206ENST00000471414 PLEKHM2Q8IWE5 1019 aa7.05□□□□□ -1.28
COPS3-206ENST00000471414 ZSCAN10Q96SZ4 725 aaPredicted RBP7.05□□□□□ -1.28
COPS3-206ENST00000471414 CDC14CA4D256 554 aa7.04□□□□□ -1.28
COPS3-206ENST00000471414 SKIP12755 728 aa7.04□□□□□ -1.28
COPS3-206ENST00000471414 NCOA4Q13772 614 aa7.04□□□□□ -1.28
COPS3-206ENST00000471414 MTFR1Q15390 333 aa7.04□□□□□ -1.28
COPS3-206ENST00000471414 EML3Q32P44 896 aa7.04□□□□□ -1.28
COPS3-206ENST00000471414 C4orf17Q53FE4 359 aa7.04□□□□□ -1.28
COPS3-206ENST00000471414 CNTNAP3BQ96NU0 1288 aa7.04□□□□□ -1.28
COPS3-206ENST00000471414 CNTNAP3Q9BZ76 1288 aa7.04□□□□□ -1.28
COPS3-206ENST00000471414 TIMMDC1Q9NPL8 285 aa7.04□□□□□ -1.28
COPS3-206ENST00000471414 F11P03951 625 aa7.03□□□□□ -1.28
COPS3-206ENST00000471414 UBAP2LQ14157 1087 aaKnown RBP7.03□□□□□ -1.28
COPS3-206ENST00000471414 TLR1Q15399 786 aa7.03□□□□□ -1.28
COPS3-206ENST00000471414 HDGFL1Q5TGJ6 251 aa7.03□□□□□ -1.28
COPS3-206ENST00000471414 RHBDD1Q8TEB9 315 aa7.03□□□□□ -1.28
COPS3-206ENST00000471414 IQSEC3Q9UPP2 1182 aaPredicted RBP7.03□□□□□ -1.28
COPS3-206ENST00000471414 A0A1B0GTH6 734 aa7.02□□□□□ -1.29
COPS3-206ENST00000471414 H7C1W4 665 aa7.02□□□□□ -1.29
COPS3-206ENST00000471414 SMTNP53814 917 aa7.02□□□□□ -1.29
COPS3-206ENST00000471414 TBC1D9Q6ZT07 1266 aa7.02□□□□□ -1.29
COPS3-206ENST00000471414 ATP9BO43861 1147 aa7.01□□□□□ -1.29
COPS3-206ENST00000471414 EPHA4P54764 986 aa7.01□□□□□ -1.29
COPS3-206ENST00000471414 GNASQ5JWF2 1037 aa7.01□□□□□ -1.29
COPS3-206ENST00000471414 NOD1Q9Y239 953 aa7.01□□□□□ -1.29
COPS3-206ENST00000471414 USP17L3A6NCW0 530 aa7□□□□□ -1.29
COPS3-206ENST00000471414 USP17L4A6NCW7 530 aa7□□□□□ -1.29
COPS3-206ENST00000471414 FAM181BA6NEQ2 426 aa7□□□□□ -1.29
COPS3-206ENST00000471414 CDK2AP1O14519 115 aa7□□□□□ -1.29
COPS3-206ENST00000471414 GTF2IP78347 998 aa7□□□□□ -1.29
COPS3-206ENST00000471414 SRSF11Q05519 484 aaKnown RBP7□□□□□ -1.29
COPS3-206ENST00000471414 LBRQ14739 615 aaKnown RBP7□□□□□ -1.29
COPS3-206ENST00000471414 ZNF385CQ66K41 422 aaPredicted RBP7□□□□□ -1.29
COPS3-206ENST00000471414 TMEM214Q6NUQ4 689 aaKnown RBP7□□□□□ -1.29
COPS3-206ENST00000471414 USP17L2Q6R6M4 530 aa7□□□□□ -1.29
COPS3-206ENST00000471414 USP17L1Q7RTZ2 530 aa7□□□□□ -1.29
COPS3-206ENST00000471414 DEPDC4Q8N2C3 294 aa7□□□□□ -1.29
COPS3-206ENST00000471414 GLMNQ92990 594 aa7□□□□□ -1.29
COPS3-206ENST00000471414 GAS2L1Q99501 681 aaPredicted RBP7□□□□□ -1.29
COPS3-206ENST00000471414 USP3Q9Y6I4 520 aa7□□□□□ -1.29
COPS3-206ENST00000471414 A6NJY4 79 aa6.99□□□□□ -1.29
COPS3-206ENST00000471414 ZBTB7BO15156 539 aaPredicted RBP6.99□□□□□ -1.29
COPS3-206ENST00000471414 DKK1O94907 266 aa6.99□□□□□ -1.29
COPS3-206ENST00000471414 PHKA2P46019 1235 aa6.99□□□□□ -1.29
COPS3-206ENST00000471414 CLDN10P78369 228 aa6.99□□□□□ -1.29
COPS3-206ENST00000471414 FOXK2Q01167 660 aa6.99□□□□□ -1.29
COPS3-206ENST00000471414 RIPOR1Q6ZS17 1223 aa6.99□□□□□ -1.29
COPS3-206ENST00000471414 CRISPLD1Q9H336 500 aa6.99□□□□□ -1.29
COPS3-206ENST00000471414 ZNF358Q9NW07 568 aa6.99□□□□□ -1.29
COPS3-206ENST00000471414 ARHGEF15O94989 841 aa6.98□□□□□ -1.29
COPS3-206ENST00000471414 ATP4AP20648 1035 aa6.98□□□□□ -1.29
COPS3-206ENST00000471414 MSX1P28360 303 aa6.98□□□□□ -1.29
COPS3-206ENST00000471414 WHAMMQ8TF30 809 aa6.98□□□□□ -1.29
COPS3-206ENST00000471414 GTPBP3Q969Y2 492 aaKnown RBP6.98□□□□□ -1.29
COPS3-206ENST00000471414 NUCKS1Q9H1E3 243 aaKnown RBP6.98□□□□□ -1.29
COPS3-206ENST00000471414 MBIPQ9NS73 344 aa6.98□□□□□ -1.29
COPS3-206ENST00000471414 NDFIP2Q9NV92 336 aa6.98□□□□□ -1.29
COPS3-206ENST00000471414 KIAA1024Q9UPX6 916 aa6.98□□□□□ -1.29
COPS3-206ENST00000471414 GPR25O00155 361 aa6.97□□□□□ -1.29
COPS3-206ENST00000471414 ADAMTS2O95450 1211 aa6.97□□□□□ -1.29
COPS3-206ENST00000471414 POTEAQ6S8J7 498 aa6.97□□□□□ -1.29
COPS3-206ENST00000471414 DNAAF2Q9NVR5 837 aaKnown RBP6.97□□□□□ -1.29
COPS3-206ENST00000471414 SCHIP1Q9P0W5 487 aaPredicted RBP6.97□□□□□ -1.29
COPS3-206ENST00000471414 SERTAD1Q9UHV2 236 aa6.97□□□□□ -1.29
COPS3-206ENST00000471414 MAFBQ9Y5Q3 323 aaPredicted RBP6.97□□□□□ -1.29
COPS3-206ENST00000471414 GTF2E1P29083 439 aaPredicted RBP6.96□□□□□ -1.3
COPS3-206ENST00000471414 TRIM50Q86XT4 487 aa6.96□□□□□ -1.3
COPS3-206ENST00000471414 SIX5Q8N196 739 aa6.96□□□□□ -1.3
COPS3-206ENST00000471414 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.96□□□□□ -1.3
COPS3-206ENST00000471414 C1orf216Q8TAB5 229 aa6.96□□□□□ -1.3
COPS3-206ENST00000471414 CFHR5Q9BXR6 569 aa6.96□□□□□ -1.3
COPS3-206ENST00000471414 NIFKQ9BYG3 293 aaKnown RBP6.96□□□□□ -1.3
COPS3-206ENST00000471414 GPAMQ9HCL2 828 aa6.96□□□□□ -1.3
COPS3-206ENST00000471414 M0R2N6 131 aa6.95□□□□□ -1.3
COPS3-206ENST00000471414 BACH1O14867 736 aa6.95□□□□□ -1.3
COPS3-206ENST00000471414 PLA2G4AP47712 749 aa6.95□□□□□ -1.3
COPS3-206ENST00000471414 GSK3AP49840 483 aa6.95□□□□□ -1.3
COPS3-206ENST00000471414 FOXR1Q6PIV2 292 aa6.95□□□□□ -1.3
COPS3-206ENST00000471414 LARGE2Q8N3Y3 721 aa6.95□□□□□ -1.3
COPS3-206ENST00000471414 ZDHHC1Q8WTX9 485 aa6.95□□□□□ -1.3
COPS3-206ENST00000471414 ZDHHC3Q9NYG2 299 aa6.95□□□□□ -1.3
COPS3-206ENST00000471414 IGF1RP08069 1367 aa6.95□□□□□ -1.3
COPS3-206ENST00000471414 PALM3A6NDB9 673 aaPredicted RBP6.94□□□□□ -1.3
COPS3-206ENST00000471414 ATP1A2P50993 1020 aa6.94□□□□□ -1.3
COPS3-206ENST00000471414 LYPD4Q6UWN0 246 aa6.94□□□□□ -1.3
COPS3-206ENST00000471414 TRERF1Q96PN7 1200 aa6.94□□□□□ -1.3
COPS3-206ENST00000471414 RUBCNLQ9H714 662 aa6.94□□□□□ -1.3
COPS3-206ENST00000471414 TFIP11Q9UBB9 837 aaKnown RBP6.94□□□□□ -1.3
COPS3-206ENST00000471414 TEAD4Q15561 434 aa6.93□□□□□ -1.3
COPS3-206ENST00000471414 KANK4Q5T7N3 995 aaPredicted RBP6.93□□□□□ -1.3
COPS3-206ENST00000471414 OGFOD1Q8N543 542 aa6.93□□□□□ -1.3
COPS3-206ENST00000471414 C7orf43Q8WVR3 580 aa6.93□□□□□ -1.3
COPS3-206ENST00000471414 PPP1R12CQ9BZL4 782 aa6.93□□□□□ -1.3
COPS3-206ENST00000471414 LRRC4BQ9NT99 713 aa6.93□□□□□ -1.3
COPS3-206ENST00000471414 MKRN1Q9UHC7 482 aaKnown RBP6.93□□□□□ -1.3
COPS3-206ENST00000471414 HCN2Q9UL51 889 aa6.93□□□□□ -1.3
COPS3-206ENST00000471414 CELA2BP08218 269 aaPredicted RBP6.92□□□□□ -1.3
COPS3-206ENST00000471414 CCDC102BQ68D86 513 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms