RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 GDF10P55107 478 aa10.5□□□□□ -0.73
SMC5-202ENST00000471372 ERVK-9P63128 1117 aa10.5□□□□□ -0.73
SMC5-202ENST00000471372 VASH1Q7L8A9 365 aaPredicted RBP10.5□□□□□ -0.73
SMC5-202ENST00000471372 TMC7Q7Z402 723 aa10.5□□□□□ -0.73
SMC5-202ENST00000471372 SAP130Q9H0E3 1048 aa10.5□□□□□ -0.73
SMC5-202ENST00000471372 TSPAN10Q9H1Z9 355 aaPredicted RBP10.5□□□□□ -0.73
SMC5-202ENST00000471372 OSBPL3Q9H4L5 887 aa10.5□□□□□ -0.73
SMC5-202ENST00000471372 ATAD2Q6PL18 1390 aa10.5□□□□□ -0.73
SMC5-202ENST00000471372 FAM13AO94988 1023 aa10.49□□□□□ -0.73
SMC5-202ENST00000471372 P4HBP07237 508 aaKnown RBP10.49□□□□□ -0.73
SMC5-202ENST00000471372 TSNAXIP1Q2TAA8 658 aa10.49□□□□□ -0.73
SMC5-202ENST00000471372 CC2D2BQ6DHV5 1058 aa10.49□□□□□ -0.73
SMC5-202ENST00000471372 CHMP7Q8WUX9 453 aaPredicted RBP10.49□□□□□ -0.73
SMC5-202ENST00000471372 MAP4K5Q9Y4K4 846 aa10.49□□□□□ -0.73
SMC5-202ENST00000471372 EPHA4P54764 986 aa10.48□□□□□ -0.73
SMC5-202ENST00000471372 RBCK1Q9BYM8 510 aa10.48□□□□□ -0.73
SMC5-202ENST00000471372 ESF1Q9H501 851 aaKnown RBP10.48□□□□□ -0.73
SMC5-202ENST00000471372 TMPRSS4Q9NRS4 437 aa10.48□□□□□ -0.73
SMC5-202ENST00000471372 SERTAD1Q9UHV2 236 aa10.48□□□□□ -0.73
SMC5-202ENST00000471372 SKOR1P84550 965 aa10.47□□□□□ -0.73
SMC5-202ENST00000471372 TRIM32Q13049 653 aa10.47□□□□□ -0.73
SMC5-202ENST00000471372 CYLDQ9NQC7 956 aa10.47□□□□□ -0.73
SMC5-202ENST00000471372 WASLO00401 505 aaPredicted RBP10.46□□□□□ -0.73
SMC5-202ENST00000471372 BACH1O14867 736 aa10.46□□□□□ -0.73
SMC5-202ENST00000471372 VARSP26640 1264 aaKnown RBP10.46□□□□□ -0.73
SMC5-202ENST00000471372 VTI1AQ96AJ9 217 aa10.46□□□□□ -0.73
SMC5-202ENST00000471372 ETNK1Q9HBU6 452 aa10.46□□□□□ -0.73
SMC5-202ENST00000471372 A0A1W2PRU2 124 aa10.45□□□□□ -0.74
SMC5-202ENST00000471372 INHAP05111 366 aa10.45□□□□□ -0.74
SMC5-202ENST00000471372 LAPTM4AQ15012 233 aa10.45□□□□□ -0.74
SMC5-202ENST00000471372 C8orf37Q96NL8 207 aa10.45□□□□□ -0.74
SMC5-202ENST00000471372 ZBTB24O43167 697 aaPredicted RBP10.44□□□□□ -0.74
SMC5-202ENST00000471372 NDUFB5O43674 189 aa10.44□□□□□ -0.74
SMC5-202ENST00000471372 ARID5BQ14865 1188 aa10.44□□□□□ -0.74
SMC5-202ENST00000471372 TBCELQ5QJ74 424 aa10.44□□□□□ -0.74
SMC5-202ENST00000471372 PPP1R18Q6NYC8 613 aa10.44□□□□□ -0.74
SMC5-202ENST00000471372 C16orf46Q6P387 395 aa10.44□□□□□ -0.74
SMC5-202ENST00000471372 BACH2Q9BYV9 841 aa10.44□□□□□ -0.74
SMC5-202ENST00000471372 PRKD2Q9BZL6 878 aa10.44□□□□□ -0.74
SMC5-202ENST00000471372 TREHO43280 583 aa10.43□□□□□ -0.74
SMC5-202ENST00000471372 PPP1R12BO60237 982 aaPredicted RBP10.43□□□□□ -0.74
SMC5-202ENST00000471372 MRPL58Q14197 206 aaKnown RBP10.43□□□□□ -0.74
SMC5-202ENST00000471372 PLA2G2CQ5R387 149 aa10.43□□□□□ -0.74
SMC5-202ENST00000471372 ZNF784Q8NCA9 323 aaPredicted RBP10.43□□□□□ -0.74
SMC5-202ENST00000471372 CCDC87Q9NVE4 849 aa10.43□□□□□ -0.74
SMC5-202ENST00000471372 BRPF3Q9ULD4 1205 aa10.43□□□□□ -0.74
SMC5-202ENST00000471372 FSHRP23945 695 aa10.42□□□□□ -0.74
SMC5-202ENST00000471372 EIF1AXP47813 144 aaKnown RBP10.42□□□□□ -0.74
SMC5-202ENST00000471372 FMR1Q06787 632 aaKnown RBP eCLIP10.42□□□□□ -0.74
SMC5-202ENST00000471372 TNFRSF10BO14763 440 aa10.41□□□□□ -0.74
SMC5-202ENST00000471372 GFRA3O60609 400 aa10.41□□□□□ -0.74
SMC5-202ENST00000471372 ZC3H6P61129 1189 aaKnown RBP10.41□□□□□ -0.74
SMC5-202ENST00000471372 FOXK2Q01167 660 aa10.41□□□□□ -0.74
SMC5-202ENST00000471372 COX20Q5RI15 118 aa10.41□□□□□ -0.74
SMC5-202ENST00000471372 SLC9A9Q8IVB4 645 aa10.41□□□□□ -0.74
SMC5-202ENST00000471372 TMC1Q8TDI8 760 aa10.41□□□□□ -0.74
SMC5-202ENST00000471372 SLC4A9Q96Q91 983 aa10.41□□□□□ -0.74
SMC5-202ENST00000471372 BCL11AQ9H165 835 aa10.41□□□□□ -0.74
SMC5-202ENST00000471372 FZD6O60353 706 aa10.4□□□□□ -0.74
SMC5-202ENST00000471372 GRM5P41594 1212 aa10.4□□□□□ -0.74
SMC5-202ENST00000471372 WNT7BP56706 349 aa10.4□□□□□ -0.74
SMC5-202ENST00000471372 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.4□□□□□ -0.74
SMC5-202ENST00000471372 RNF223E7ERA6 249 aa10.39□□□□□ -0.75
SMC5-202ENST00000471372 LILRA1O75019 489 aa10.39□□□□□ -0.75
SMC5-202ENST00000471372 AAMPQ13685 434 aa10.39□□□□□ -0.75
SMC5-202ENST00000471372 DSC3Q14574 896 aa10.39□□□□□ -0.75
SMC5-202ENST00000471372 LDLRAD1Q5T700 205 aa10.39□□□□□ -0.75
SMC5-202ENST00000471372 EHBP1Q8NDI1 1231 aa10.39□□□□□ -0.75
SMC5-202ENST00000471372 SREK1Q8WXA9 508 aaKnown RBP10.39□□□□□ -0.75
SMC5-202ENST00000471372 DRC1Q96MC2 740 aa10.39□□□□□ -0.75
SMC5-202ENST00000471372 FAM161BQ96MY7 647 aa10.39□□□□□ -0.75
SMC5-202ENST00000471372 CDK15Q96Q40 435 aa10.39□□□□□ -0.75
SMC5-202ENST00000471372 C2orf49Q9BVC5 232 aaPredicted RBP10.39□□□□□ -0.75
SMC5-202ENST00000471372 SCHIP1Q9P0W5 487 aaPredicted RBP10.39□□□□□ -0.75
SMC5-202ENST00000471372 IGHA2P01877 340 aa10.38□□□□□ -0.75
SMC5-202ENST00000471372 NAALADL2Q58DX5 795 aa10.38□□□□□ -0.75
SMC5-202ENST00000471372 C9orf131Q5VYM1 1079 aa10.38□□□□□ -0.75
SMC5-202ENST00000471372 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.38□□□□□ -0.75
SMC5-202ENST00000471372 RAB6BQ9NRW1 208 aa10.38□□□□□ -0.75
SMC5-202ENST00000471372 RNF19AQ9NV58 838 aa10.38□□□□□ -0.75
SMC5-202ENST00000471372 STIM2Q9P246 746 aa10.38□□□□□ -0.75
SMC5-202ENST00000471372 TLL2Q9Y6L7 1015 aa10.38□□□□□ -0.75
SMC5-202ENST00000471372 V9GY48 417 aaPredicted RBP10.38□□□□□ -0.75
SMC5-202ENST00000471372 A6NJY4 79 aa10.37□□□□□ -0.75
SMC5-202ENST00000471372 LDHBP07195 334 aaKnown RBP10.37□□□□□ -0.75
SMC5-202ENST00000471372 ERCC5P28715 1186 aaPredicted RBP10.37□□□□□ -0.75
SMC5-202ENST00000471372 MAPK8P45983 427 aa10.37□□□□□ -0.75
SMC5-202ENST00000471372 HDLBPQ00341 1268 aaKnown RBP10.37□□□□□ -0.75
SMC5-202ENST00000471372 PLCB3Q01970 1234 aa10.37□□□□□ -0.75
SMC5-202ENST00000471372 DHX9Q08211 1270 aaKnown RBP10.37□□□□□ -0.75
SMC5-202ENST00000471372 FAM26DQ5JW98 314 aa10.37□□□□□ -0.75
SMC5-202ENST00000471372 CYP2U1Q7Z449 544 aa10.37□□□□□ -0.75
SMC5-202ENST00000471372 CITED4Q96RK1 184 aa10.37□□□□□ -0.75
SMC5-202ENST00000471372 QTRT2Q9H974 415 aaKnown RBP10.37□□□□□ -0.75
SMC5-202ENST00000471372 LRFN2Q9ULH4 789 aa10.37□□□□□ -0.75
SMC5-202ENST00000471372 USP3Q9Y6I4 520 aa10.37□□□□□ -0.75
SMC5-202ENST00000471372 ZBTB39O15060 712 aa10.36□□□□□ -0.75
SMC5-202ENST00000471372 GPR182O15218 404 aa10.36□□□□□ -0.75
SMC5-202ENST00000471372 GNRH1P01148 92 aa10.36□□□□□ -0.75
SMC5-202ENST00000471372 ADD1P35611 737 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms