RNA–Protein interactions for RNA: ENST00000470983.5

DNMT3A-209, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-209ENST00000470983 U2AF1Q01081 240 aaKnown RBP eCLIP20.16■□□□□ 0.82
DNMT3A-209ENST00000470983 MTHFSDQ2M296 383 aaKnown RBP20.16■□□□□ 0.82
DNMT3A-209ENST00000470983 TMOD3Q9NYL9 352 aa20.16■□□□□ 0.82
DNMT3A-209ENST00000470983 NUDCQ9Y266 331 aa20.16■□□□□ 0.82
DNMT3A-209ENST00000470983 PALLDQ8WX93 1383 aa20.16■□□□□ 0.82
DNMT3A-209ENST00000470983 MSH5O43196 834 aa20.15■□□□□ 0.82
DNMT3A-209ENST00000470983 GIGYF1O75420 1035 aaPredicted RBP20.15■□□□□ 0.82
DNMT3A-209ENST00000470983 HSP90AB1P08238 724 aaKnown RBP20.15■□□□□ 0.82
DNMT3A-209ENST00000470983 PELP1Q8IZL8 1130 aaKnown RBP20.15■□□□□ 0.82
DNMT3A-209ENST00000470983 DCAF5Q96JK2 942 aa20.15■□□□□ 0.82
DNMT3A-209ENST00000470983 TAF1LQ8IZX4 1826 aa20.15■□□□□ 0.82
DNMT3A-209ENST00000470983 TUBGCP6Q96RT7 1819 aa20.15■□□□□ 0.82
DNMT3A-209ENST00000470983 C5P01031 1676 aa20.14■□□□□ 0.81
DNMT3A-209ENST00000470983 PRKAR2BP31323 418 aa20.14■□□□□ 0.81
DNMT3A-209ENST00000470983 RSPH6AQ9H0K4 717 aa20.14■□□□□ 0.81
DNMT3A-209ENST00000470983 MYBBP1AQ9BQG0 1328 aaKnown RBP20.13■□□□□ 0.81
DNMT3A-209ENST00000470983 AKAP4Q5JQC9 854 aa20.13■□□□□ 0.81
DNMT3A-209ENST00000470983 ASAP1Q9ULH1 1129 aa20.12■□□□□ 0.81
DNMT3A-209ENST00000470983 ADAMTS7Q9UKP4 1686 aa20.12■□□□□ 0.81
DNMT3A-209ENST00000470983 CHD4Q14839 1912 aa20.12■□□□□ 0.81
DNMT3A-209ENST00000470983 ERVV-2B6SEH9 535 aa20.11■□□□□ 0.81
DNMT3A-209ENST00000470983 PHACTR3Q96KR7 559 aa20.11■□□□□ 0.81
DNMT3A-209ENST00000470983 CABP4P57796 275 aa20.1■□□□□ 0.81
DNMT3A-209ENST00000470983 SMARCC1Q92922 1105 aaPredicted RBP20.1■□□□□ 0.81
DNMT3A-209ENST00000470983 LGR6Q9HBX8 967 aa20.1■□□□□ 0.81
DNMT3A-209ENST00000470983 PRKRIP1Q9H875 184 aaPredicted RBP20.09■□□□□ 0.81
DNMT3A-209ENST00000470983 ATG3Q9NT62 314 aa20.09■□□□□ 0.81
DNMT3A-209ENST00000470983 QSER1Q2KHR3 1735 aa20.08■□□□□ 0.81
DNMT3A-209ENST00000470983 MRC1P22897 1456 aa20.08■□□□□ 0.81
DNMT3A-209ENST00000470983 CD2APQ9Y5K6 639 aa20.08■□□□□ 0.81
DNMT3A-209ENST00000470983 RNMTO43148 476 aaKnown RBP20.07■□□□□ 0.8
DNMT3A-209ENST00000470983 NFATC2IPQ8NCF5 419 aa20.07■□□□□ 0.8
DNMT3A-209ENST00000470983 GAS2L2Q8NHY3 880 aa20.07■□□□□ 0.8
DNMT3A-209ENST00000470983 DLG5Q8TDM6 1919 aa20.07■□□□□ 0.8
DNMT3A-209ENST00000470983 FCHSD2O94868 740 aa20.06■□□□□ 0.8
DNMT3A-209ENST00000470983 C4BP0C0L5 1744 aa20.06■□□□□ 0.8
DNMT3A-209ENST00000470983 COL23A1Q86Y22 540 aaPredicted RBP20.06■□□□□ 0.8
DNMT3A-209ENST00000470983 LOC102724428A0A0B4J2F2 783 aa20.05■□□□□ 0.8
DNMT3A-209ENST00000470983 SIK1P57059 783 aa20.05■□□□□ 0.8
DNMT3A-209ENST00000470983 SIPA1L3O60292 1781 aaPredicted RBP20.05■□□□□ 0.8
DNMT3A-209ENST00000470983 NLGN2Q8NFZ4 835 aa20.04■□□□□ 0.8
DNMT3A-209ENST00000470983 GNAT3A8MTJ3 354 aa20.03■□□□□ 0.8
DNMT3A-209ENST00000470983 RBM42Q9BTD8 480 aaKnown RBP20.03■□□□□ 0.8
DNMT3A-209ENST00000470983 SLC52A2Q9HAB3 445 aa20.03■□□□□ 0.8
DNMT3A-209ENST00000470983 COL5A3P25940 1745 aaPredicted RBP20.02■□□□□ 0.8
DNMT3A-209ENST00000470983 ITPK1Q13572 414 aa20.02■□□□□ 0.8
DNMT3A-209ENST00000470983 IL17REQ8NFR9 667 aa20.02■□□□□ 0.8
DNMT3A-209ENST00000470983 ZNF831Q5JPB2 1677 aa20.02■□□□□ 0.8
DNMT3A-209ENST00000470983 UBR3Q6ZT12 1888 aa20.02■□□□□ 0.8
DNMT3A-209ENST00000470983 TJP1Q07157 1748 aa20.02■□□□□ 0.79
DNMT3A-209ENST00000470983 ATP6V1AP38606 617 aa20.01■□□□□ 0.79
DNMT3A-209ENST00000470983 LINC00116Q8NCU8 138 aa20.01■□□□□ 0.79
DNMT3A-209ENST00000470983 AK7Q96M32 723 aa20.01■□□□□ 0.79
DNMT3A-209ENST00000470983 SLC4A9Q96Q91 983 aa20.01■□□□□ 0.79
DNMT3A-209ENST00000470983 COL24A1Q17RW2 1714 aa20■□□□□ 0.79
DNMT3A-209ENST00000470983 PTCD1O75127 700 aaKnown RBP20■□□□□ 0.79
DNMT3A-209ENST00000470983 PLEKHF1Q96S99 279 aa20■□□□□ 0.79
DNMT3A-209ENST00000470983 UBR2Q8IWV8 1755 aa19.99■□□□□ 0.79
DNMT3A-209ENST00000470983 SLC39A6Q13433 755 aa19.99■□□□□ 0.79
DNMT3A-209ENST00000470983 YBX3P16989 372 aaKnown RBP eCLIP19.98■□□□□ 0.79
DNMT3A-209ENST00000470983 MSL1Q68DK7 614 aa19.98■□□□□ 0.79
DNMT3A-209ENST00000470983 KCPQ6ZWJ8 1503 aa19.97■□□□□ 0.79
DNMT3A-209ENST00000470983 NEFMP07197 916 aa19.97■□□□□ 0.79
DNMT3A-209ENST00000470983 TEFQ10587 303 aa19.97■□□□□ 0.79
DNMT3A-209ENST00000470983 DCTN1Q14203 1278 aa19.97■□□□□ 0.79
DNMT3A-209ENST00000470983 SMIM5Q71RC9 77 aa19.97■□□□□ 0.79
DNMT3A-209ENST00000470983 MCM10Q7L590 875 aa19.97■□□□□ 0.79
DNMT3A-209ENST00000470983 GPBP1L1Q9HC44 474 aaPredicted RBP19.97■□□□□ 0.79
DNMT3A-209ENST00000470983 CICQ96RK0 1608 aaPredicted RBP19.97■□□□□ 0.79
DNMT3A-209ENST00000470983 MAPK8IP3Q9UPT6 1336 aa19.97■□□□□ 0.79
DNMT3A-209ENST00000470983 CEMIPQ8WUJ3 1361 aa19.96■□□□□ 0.79
DNMT3A-209ENST00000470983 MYH14Q7Z406 1995 aaKnown RBP19.96■□□□□ 0.79
DNMT3A-209ENST00000470983 AMIGO3Q86WK7 504 aa19.96■□□□□ 0.79
DNMT3A-209ENST00000470983 SSFA2P28290 1259 aa19.95■□□□□ 0.78
DNMT3A-209ENST00000470983 WDR43Q15061 677 aaKnown RBP eCLIP19.95■□□□□ 0.78
DNMT3A-209ENST00000470983 CCDC146Q8IYE0 955 aa19.95■□□□□ 0.78
DNMT3A-209ENST00000470983 RTF1Q92541 710 aaKnown RBP19.95■□□□□ 0.78
DNMT3A-209ENST00000470983 NFE2L2Q16236 605 aa19.94■□□□□ 0.78
DNMT3A-209ENST00000470983 CCDC184Q52MB2 194 aa19.94■□□□□ 0.78
DNMT3A-209ENST00000470983 PHF14O94880 888 aa19.93■□□□□ 0.78
DNMT3A-209ENST00000470983 PNNQ9H307 717 aaKnown RBP19.93■□□□□ 0.78
DNMT3A-209ENST00000470983 GNPATO15228 680 aa19.92■□□□□ 0.78
DNMT3A-209ENST00000470983 ANP32CO43423 234 aa19.92■□□□□ 0.78
DNMT3A-209ENST00000470983 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.91■□□□□ 0.78
DNMT3A-209ENST00000470983 DNAJC10Q8IXB1 793 aa19.91■□□□□ 0.78
DNMT3A-209ENST00000470983 ADAMTS8Q9UP79 889 aa19.91■□□□□ 0.78
DNMT3A-209ENST00000470983 ATP10DQ9P241 1426 aa19.91■□□□□ 0.78
DNMT3A-209ENST00000470983 UTRNP46939 3433 aa19.9■□□□□ 0.78
DNMT3A-209ENST00000470983 KCNQ3O43525 872 aa19.9■□□□□ 0.78
DNMT3A-209ENST00000470983 TTC5Q8N0Z6 440 aa19.9■□□□□ 0.78
DNMT3A-209ENST00000470983 THUMPD2Q9BTF0 503 aaKnown RBP19.9■□□□□ 0.78
DNMT3A-209ENST00000470983 C4AP0C0L4 1744 aa19.9■□□□□ 0.78
DNMT3A-209ENST00000470983 HTATSF1O43719 755 aaKnown RBP19.89■□□□□ 0.77
DNMT3A-209ENST00000470983 CNTNAP4Q9C0A0 1308 aa19.89■□□□□ 0.77
DNMT3A-209ENST00000470983 RRP7AQ9Y3A4 280 aaKnown RBP19.89■□□□□ 0.77
DNMT3A-209ENST00000470983 BTBD11A6QL63 1104 aa19.88■□□□□ 0.77
DNMT3A-209ENST00000470983 ZNF790Q6PG37 636 aa19.88■□□□□ 0.77
DNMT3A-209ENST00000470983 ZNF496Q96IT1 587 aaPredicted RBP19.88■□□□□ 0.77
DNMT3A-209ENST00000470983 KDM3BQ7LBC6 1761 aa19.88■□□□□ 0.77
DNMT3A-209ENST00000470983 CRKLP46109 303 aaKnown RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms