RNA–Protein interactions for RNA: ENST00000470972.5

SLC44A1-205, Transcript of solute carrier family 44 member 1, humanhuman

TSL 1 (best)

Gene SLC44A1, Length 10,433 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1-205ENST00000470972 ABCF2Q9UG63 623 aa13.3□□□□□ -0.28
SLC44A1-205ENST00000470972 PLCD3Q8N3E9 789 aa13.3□□□□□ -0.28
SLC44A1-205ENST00000470972 WDR78Q5VTH9 848 aa13.29□□□□□ -0.28
SLC44A1-205ENST00000470972 NUTM1Q86Y26 1132 aa13.29□□□□□ -0.28
SLC44A1-205ENST00000470972 SPECC1Q5M775 1068 aa13.29□□□□□ -0.28
SLC44A1-205ENST00000470972 VPS36Q86VN1 386 aa13.29□□□□□ -0.28
SLC44A1-205ENST00000470972 SPATA24Q86W54 205 aa13.29□□□□□ -0.28
SLC44A1-205ENST00000470972 AIDAQ96BJ3 306 aa13.29□□□□□ -0.28
SLC44A1-205ENST00000470972 ESPNB1AK53 854 aa13.29□□□□□ -0.28
SLC44A1-205ENST00000470972 SRGAP3O43295 1099 aa13.29□□□□□ -0.28
SLC44A1-205ENST00000470972 RRP9O43818 475 aaKnown RBP13.29□□□□□ -0.28
SLC44A1-205ENST00000470972 APBB1IPQ7Z5R6 666 aaPredicted RBP13.29□□□□□ -0.28
SLC44A1-205ENST00000470972 POLR3DP05423 398 aaPredicted RBP13.29□□□□□ -0.28
SLC44A1-205ENST00000470972 CTR9Q6PD62 1173 aa13.29□□□□□ -0.28
SLC44A1-205ENST00000470972 MAATS1Q7Z4T9 603 aa13.29□□□□□ -0.28
SLC44A1-205ENST00000470972 TOP1P11387 765 aaKnown RBP13.29□□□□□ -0.28
SLC44A1-205ENST00000470972 HOMER2Q9NSB8 354 aa13.29□□□□□ -0.28
SLC44A1-205ENST00000470972 GTF2F1P35269 517 aaKnown RBP eCLIP13.29□□□□□ -0.28
SLC44A1-205ENST00000470972 CHD1LQ86WJ1 897 aa13.29□□□□□ -0.28
SLC44A1-205ENST00000470972 CGNQ9P2M7 1197 aaKnown RBP13.29□□□□□ -0.28
SLC44A1-205ENST00000470972 TDRD12Q587J7 1177 aaKnown RBP13.28□□□□□ -0.28
SLC44A1-205ENST00000470972 PUF60Q9UHX1 559 aaKnown RBP13.28□□□□□ -0.28
SLC44A1-205ENST00000470972 SULT6B1Q6IMI4 303 aa13.28□□□□□ -0.28
SLC44A1-205ENST00000470972 ZNF530Q6P9A1 599 aaPredicted RBP13.28□□□□□ -0.28
SLC44A1-205ENST00000470972 CCDC83Q8IWF9 413 aa13.28□□□□□ -0.28
SLC44A1-205ENST00000470972 CCDC82Q8N4S0 544 aa13.28□□□□□ -0.28
SLC44A1-205ENST00000470972 CTNNA3Q9UI47 895 aa13.28□□□□□ -0.28
SLC44A1-205ENST00000470972 PPP6R1Q9UPN7 881 aa13.28□□□□□ -0.28
SLC44A1-205ENST00000470972 RAPGEF2Q9Y4G8 1499 aa13.28□□□□□ -0.28
SLC44A1-205ENST00000470972 KIF18AQ8NI77 898 aa13.28□□□□□ -0.28
SLC44A1-205ENST00000470972 ZSCAN12O43309 604 aa13.27□□□□□ -0.28
SLC44A1-205ENST00000470972 CRACR2BQ8N4Y2 399 aaPredicted RBP13.27□□□□□ -0.28
SLC44A1-205ENST00000470972 DRC1Q96MC2 740 aa13.27□□□□□ -0.28
SLC44A1-205ENST00000470972 SRCIN1Q9C0H9 1055 aa13.27□□□□□ -0.28
SLC44A1-205ENST00000470972 MICALCLQ6ZW33 695 aa13.27□□□□□ -0.28
SLC44A1-205ENST00000470972 PAXIP1Q6ZW49 1069 aaPredicted RBP13.27□□□□□ -0.28
SLC44A1-205ENST00000470972 CLIP2Q9UDT6 1046 aa13.27□□□□□ -0.28
SLC44A1-205ENST00000470972 PDS5BQ9NTI5 1447 aa13.27□□□□□ -0.29
SLC44A1-205ENST00000470972 ANKRD18BA2A2Z9 1011 aa13.27□□□□□ -0.29
SLC44A1-205ENST00000470972 PRKCSHP14314 528 aaPredicted RBP13.27□□□□□ -0.29
SLC44A1-205ENST00000470972 FERP16591 822 aa13.27□□□□□ -0.29
SLC44A1-205ENST00000470972 RRBP1Q9P2E9 1410 aaKnown RBP13.27□□□□□ -0.29
SLC44A1-205ENST00000470972 TTLL12Q14166 644 aaPredicted RBP13.27□□□□□ -0.29
SLC44A1-205ENST00000470972 MRPS9P82933 396 aaKnown RBP13.26□□□□□ -0.29
SLC44A1-205ENST00000470972 PPP1R14CQ8TAE6 165 aa13.26□□□□□ -0.29
SLC44A1-205ENST00000470972 ZSCAN31Q96LW9 406 aaPredicted RBP13.26□□□□□ -0.29
SLC44A1-205ENST00000470972 C16orf45Q96MC5 204 aaPredicted RBP13.26□□□□□ -0.29
SLC44A1-205ENST00000470972 TMOD2Q9NZR1 351 aa13.26□□□□□ -0.29
SLC44A1-205ENST00000470972 PAIP2Q9BPZ3 127 aaKnown RBP13.26□□□□□ -0.29
SLC44A1-205ENST00000470972 BTBD11A6QL63 1104 aa13.26□□□□□ -0.29
SLC44A1-205ENST00000470972 ARL1P40616 181 aaPredicted RBP13.26□□□□□ -0.29
SLC44A1-205ENST00000470972 LMAN1P49257 510 aa13.26□□□□□ -0.29
SLC44A1-205ENST00000470972 CA8P35219 290 aa13.26□□□□□ -0.29
SLC44A1-205ENST00000470972 XPCQ01831 940 aaPredicted RBP13.26□□□□□ -0.29
SLC44A1-205ENST00000470972 MCM3P25205 808 aa13.26□□□□□ -0.29
SLC44A1-205ENST00000470972 JPH4Q96JJ6 628 aa13.26□□□□□ -0.29
SLC44A1-205ENST00000470972 IGHMBP2P38935 993 aaKnown RBP13.25□□□□□ -0.29
SLC44A1-205ENST00000470972 PABPN1LA6NDY0 278 aaKnown RBP13.25□□□□□ -0.29
SLC44A1-205ENST00000470972 NOP2P46087 812 aaKnown RBP13.25□□□□□ -0.29
SLC44A1-205ENST00000470972 CEP126Q9P2H0 1117 aa13.25□□□□□ -0.29
SLC44A1-205ENST00000470972 ZHX1Q9UKY1 873 aaPredicted RBP13.25□□□□□ -0.29
SLC44A1-205ENST00000470972 FSD2A1L4K1 749 aa13.25□□□□□ -0.29
SLC44A1-205ENST00000470972 MMRN2Q9H8L6 949 aa13.25□□□□□ -0.29
SLC44A1-205ENST00000470972 MKNK2Q9HBH9 465 aa13.25□□□□□ -0.29
SLC44A1-205ENST00000470972 PAFAH1B1P43034 410 aa13.25□□□□□ -0.29
SLC44A1-205ENST00000470972 METTL24Q5JXM2 366 aa13.25□□□□□ -0.29
SLC44A1-205ENST00000470972 BRD4O60885 1362 aaPredicted RBP13.25□□□□□ -0.29
SLC44A1-205ENST00000470972 CCDC160A6NGH7 325 aa13.25□□□□□ -0.29
SLC44A1-205ENST00000470972 SMARCA5O60264 1052 aaPredicted RBP13.25□□□□□ -0.29
SLC44A1-205ENST00000470972 PPP2R1AP30153 589 aa13.25□□□□□ -0.29
SLC44A1-205ENST00000470972 RAD54L2Q9Y4B4 1467 aa13.24□□□□□ -0.29
SLC44A1-205ENST00000470972 MCM4P33991 863 aa13.24□□□□□ -0.29
SLC44A1-205ENST00000470972 BMS1Q14692 1282 aaKnown RBP13.24□□□□□ -0.29
SLC44A1-205ENST00000470972 KRT32Q14532 448 aa13.24□□□□□ -0.29
SLC44A1-205ENST00000470972 CKAP2LQ8IYA6 745 aa13.24□□□□□ -0.29
SLC44A1-205ENST00000470972 TSNARE1Q96NA8 513 aa13.24□□□□□ -0.29
SLC44A1-205ENST00000470972 TERF1P54274 439 aa13.24□□□□□ -0.29
SLC44A1-205ENST00000470972 SLC4A8Q2Y0W8 1093 aa13.24□□□□□ -0.29
SLC44A1-205ENST00000470972 TAOK3Q9H2K8 898 aa13.24□□□□□ -0.29
SLC44A1-205ENST00000470972 USO1O60763 962 aaKnown RBP13.24□□□□□ -0.29
SLC44A1-205ENST00000470972 PRPF40BQ6NWY9 871 aaKnown RBP13.24□□□□□ -0.29
SLC44A1-205ENST00000470972 BIN1O00499 593 aa13.23□□□□□ -0.29
SLC44A1-205ENST00000470972 GIGYF2Q6Y7W6 1299 aaKnown RBP13.23□□□□□ -0.29
SLC44A1-205ENST00000470972 ANKIB1Q9P2G1 1089 aa13.23□□□□□ -0.29
SLC44A1-205ENST00000470972 MTIF2P46199 727 aaKnown RBP13.23□□□□□ -0.29
SLC44A1-205ENST00000470972 CCDC183Q5T5S1 534 aa13.23□□□□□ -0.29
SLC44A1-205ENST00000470972 WIZO95785 1651 aa13.23□□□□□ -0.29
SLC44A1-205ENST00000470972 RANBP6O60518 1105 aaKnown RBP13.23□□□□□ -0.29
SLC44A1-205ENST00000470972 ISM2Q6H9L7 571 aa13.23□□□□□ -0.29
SLC44A1-205ENST00000470972 SMARCC1Q92922 1105 aaPredicted RBP13.23□□□□□ -0.29
SLC44A1-205ENST00000470972 ZSWIM4Q9H7M6 989 aa13.23□□□□□ -0.29
SLC44A1-205ENST00000470972 FGFR1OPO95684 399 aaKnown RBP13.23□□□□□ -0.29
SLC44A1-205ENST00000470972 ZBTB9Q96C00 473 aa13.23□□□□□ -0.29
SLC44A1-205ENST00000470972 ALS2CR12Q96Q35 445 aa13.23□□□□□ -0.29
SLC44A1-205ENST00000470972 MXRA7P84157 204 aa13.23□□□□□ -0.29
SLC44A1-205ENST00000470972 CUL5Q93034 780 aa13.23□□□□□ -0.29
SLC44A1-205ENST00000470972 CFAP57Q96MR6 1250 aa13.23□□□□□ -0.29
SLC44A1-205ENST00000470972 LARP6Q9BRS8 491 aaKnown RBP13.23□□□□□ -0.29
SLC44A1-205ENST00000470972 ANO10Q9NW15 660 aa13.23□□□□□ -0.29
SLC44A1-205ENST00000470972 MIS18AQ9NYP9 233 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms