RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 VRTNQ9H8Y1 702 aa10.93□□□□□ -0.66
SSB-209ENST00000470621 DNAAF2Q9NVR5 837 aaKnown RBP10.93□□□□□ -0.66
SSB-209ENST00000470621 HRH3Q9Y5N1 445 aa10.93□□□□□ -0.66
SSB-209ENST00000470621 TTLL8A6PVC2 850 aa10.92□□□□□ -0.66
SSB-209ENST00000470621 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.92□□□□□ -0.66
SSB-209ENST00000470621 TPCN2Q8NHX9 752 aa10.92□□□□□ -0.66
SSB-209ENST00000470621 RNF217Q8TC41 542 aa10.92□□□□□ -0.66
SSB-209ENST00000470621 FIGNL2A6NMB9 653 aa10.91□□□□□ -0.66
SSB-209ENST00000470621 USP17L15C9J2P7 530 aa10.91□□□□□ -0.66
SSB-209ENST00000470621 USP17L10C9JJH3 530 aa10.91□□□□□ -0.66
SSB-209ENST00000470621 USP17L13C9JLJ4 530 aa10.91□□□□□ -0.66
SSB-209ENST00000470621 USP17L12C9JPN9 530 aa10.91□□□□□ -0.66
SSB-209ENST00000470621 USP17L11C9JVI0 530 aa10.91□□□□□ -0.66
SSB-209ENST00000470621 USP17L21D6R901 530 aa10.91□□□□□ -0.66
SSB-209ENST00000470621 USP17L18D6R9N7 530 aa10.91□□□□□ -0.66
SSB-209ENST00000470621 USP17L22D6RA61 530 aa10.91□□□□□ -0.66
SSB-209ENST00000470621 USP17L17D6RBQ6 530 aa10.91□□□□□ -0.66
SSB-209ENST00000470621 USP17L19D6RCP7 530 aa10.91□□□□□ -0.66
SSB-209ENST00000470621 USP17L20D6RJB6 530 aa10.91□□□□□ -0.66
SSB-209ENST00000470621 DKK1O94907 266 aa10.91□□□□□ -0.66
SSB-209ENST00000470621 INHAP05111 366 aa10.91□□□□□ -0.66
SSB-209ENST00000470621 VSIG8P0DPA2 414 aa10.91□□□□□ -0.66
SSB-209ENST00000470621 ATP1A2P50993 1020 aa10.91□□□□□ -0.66
SSB-209ENST00000470621 USP17L24Q0WX57 530 aa10.91□□□□□ -0.66
SSB-209ENST00000470621 PTK7Q13308 1070 aa10.91□□□□□ -0.66
SSB-209ENST00000470621 ESYT1Q9BSJ8 1104 aa10.91□□□□□ -0.66
SSB-209ENST00000470621 SERTAD1Q9UHV2 236 aa10.91□□□□□ -0.66
SSB-209ENST00000470621 CCDC102BQ68D86 513 aa10.9□□□□□ -0.66
SSB-209ENST00000470621 XAGE2Q96GT9 111 aa10.9□□□□□ -0.66
SSB-209ENST00000470621 ZNF358Q9NW07 568 aa10.9□□□□□ -0.66
SSB-209ENST00000470621 SIX5Q8N196 739 aa10.89□□□□□ -0.67
SSB-209ENST00000470621 NLRP3Q96P20 1036 aa10.89□□□□□ -0.67
SSB-209ENST00000470621 FAM196BA6NMK8 535 aa10.88□□□□□ -0.67
SSB-209ENST00000470621 SFI1A8K8P3 1242 aa10.88□□□□□ -0.67
SSB-209ENST00000470621 WASLO00401 505 aaPredicted RBP10.88□□□□□ -0.67
SSB-209ENST00000470621 RNF144AP50876 292 aaPredicted RBP10.88□□□□□ -0.67
SSB-209ENST00000470621 CENPCQ03188 943 aa10.88□□□□□ -0.67
SSB-209ENST00000470621 ESCO1Q5FWF5 840 aa10.88□□□□□ -0.67
SSB-209ENST00000470621 LARGE2Q8N3Y3 721 aa10.88□□□□□ -0.67
SSB-209ENST00000470621 FHDC1Q9C0D6 1143 aaPredicted RBP10.88□□□□□ -0.67
SSB-209ENST00000470621 MAN1A2O60476 641 aa10.87□□□□□ -0.67
SSB-209ENST00000470621 TLR1Q15399 786 aa10.87□□□□□ -0.67
SSB-209ENST00000470621 LARP1Q6PKG0 1096 aaKnown RBP10.87□□□□□ -0.67
SSB-209ENST00000470621 PBXIP1Q96AQ6 731 aa10.87□□□□□ -0.67
SSB-209ENST00000470621 ZMIZ1Q9ULJ6 1067 aa10.87□□□□□ -0.67
SSB-209ENST00000470621 PRICKLE2Q7Z3G6 844 aa10.86□□□□□ -0.67
SSB-209ENST00000470621 ARXQ96QS3 562 aa10.86□□□□□ -0.67
SSB-209ENST00000470621 USP3Q9Y6I4 520 aa10.86□□□□□ -0.67
SSB-209ENST00000470621 GPC1P35052 558 aa10.85□□□□□ -0.67
SSB-209ENST00000470621 DPYDQ12882 1025 aa10.85□□□□□ -0.67
SSB-209ENST00000470621 SLC27A3Q5K4L6 730 aa10.85□□□□□ -0.67
SSB-209ENST00000470621 GRIP2Q9C0E4 1043 aa10.85□□□□□ -0.67
SSB-209ENST00000470621 ANKMY2Q8IV38 441 aa10.84□□□□□ -0.67
SSB-209ENST00000470621 TSEN2Q8NCE0 465 aaKnown RBP10.84□□□□□ -0.67
SSB-209ENST00000470621 NOVA2Q9UNW9 492 aaKnown RBP10.84□□□□□ -0.67
SSB-209ENST00000470621 LGR5O75473 907 aa10.83□□□□□ -0.68
SSB-209ENST00000470621 RHOQP17081 205 aa10.83□□□□□ -0.68
SSB-209ENST00000470621 SMTNP53814 917 aa10.83□□□□□ -0.68
SSB-209ENST00000470621 EPHA4P54764 986 aa10.83□□□□□ -0.68
SSB-209ENST00000470621 LYSMD3Q7Z3D4 306 aa10.83□□□□□ -0.68
SSB-209ENST00000470621 SLC4A9Q96Q91 983 aa10.83□□□□□ -0.68
SSB-209ENST00000470621 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.82□□□□□ -0.68
SSB-209ENST00000470621 TNS4Q8IZW8 715 aa10.82□□□□□ -0.68
SSB-209ENST00000470621 STK32AQ8WU08 396 aa10.82□□□□□ -0.68
SSB-209ENST00000470621 ZSCAN10Q96SZ4 725 aaPredicted RBP10.82□□□□□ -0.68
SSB-209ENST00000470621 A6NJY4 79 aa10.81□□□□□ -0.68
SSB-209ENST00000470621 ATG7O95352 703 aa10.81□□□□□ -0.68
SSB-209ENST00000470621 SEC13P55735 322 aa10.81□□□□□ -0.68
SSB-209ENST00000470621 POU4F2Q12837 409 aa10.81□□□□□ -0.68
SSB-209ENST00000470621 MTFR1Q15390 333 aa10.81□□□□□ -0.68
SSB-209ENST00000470621 BACH1O14867 736 aa10.8□□□□□ -0.68
SSB-209ENST00000470621 TBCELQ5QJ74 424 aa10.8□□□□□ -0.68
SSB-209ENST00000470621 IQSEC3Q9UPP2 1182 aaPredicted RBP10.8□□□□□ -0.68
SSB-209ENST00000470621 SENP3-EIF4A1A0A087X0R7 540 aa10.79□□□□□ -0.68
SSB-209ENST00000470621 PPFIA3O75145 1194 aa10.79□□□□□ -0.68
SSB-209ENST00000470621 PTSQ03393 145 aa10.79□□□□□ -0.68
SSB-209ENST00000470621 TMEM214Q6NUQ4 689 aaKnown RBP10.79□□□□□ -0.68
SSB-209ENST00000470621 SPATA31C2B4DYI2 1134 aa10.78□□□□□ -0.68
SSB-209ENST00000470621 M0R2N6 131 aa10.78□□□□□ -0.68
SSB-209ENST00000470621 PHKA2P46019 1235 aa10.78□□□□□ -0.68
SSB-209ENST00000470621 ELOAQ14241 798 aaKnown RBP10.78□□□□□ -0.68
SSB-209ENST00000470621 C4orf17Q53FE4 359 aa10.78□□□□□ -0.68
SSB-209ENST00000470621 NBPF10Q6P3W6 841 aaKnown RBP10.78□□□□□ -0.68
SSB-209ENST00000470621 PPARGC1BQ86YN6 1023 aaKnown RBP10.78□□□□□ -0.68
SSB-209ENST00000470621 ZNF295-AS1Q8N0V1 137 aa10.78□□□□□ -0.68
SSB-209ENST00000470621 NBPF15Q8N660 670 aa10.78□□□□□ -0.68
SSB-209ENST00000470621 RBM19Q9Y4C8 960 aaKnown RBP10.78□□□□□ -0.68
SSB-209ENST00000470621 FOXK2Q01167 660 aa10.77□□□□□ -0.69
SSB-209ENST00000470621 TMEM164Q5U3C3 297 aa10.77□□□□□ -0.69
SSB-209ENST00000470621 GAS2L2Q8NHY3 880 aa10.77□□□□□ -0.69
SSB-209ENST00000470621 FAM200AQ8TCP9 573 aa10.77□□□□□ -0.69
SSB-209ENST00000470621 RHBDD1Q8TEB9 315 aa10.77□□□□□ -0.69
SSB-209ENST00000470621 TSPAN10Q9H1Z9 355 aaPredicted RBP10.77□□□□□ -0.69
SSB-209ENST00000470621 SCHIP1Q9P0W5 487 aaPredicted RBP10.77□□□□□ -0.69
SSB-209ENST00000470621 SLC9A9Q8IVB4 645 aa10.76□□□□□ -0.69
SSB-209ENST00000470621 PPP1R15AO75807 674 aaPredicted RBP10.75□□□□□ -0.69
SSB-209ENST00000470621 TAS1R3Q7RTX0 852 aa10.75□□□□□ -0.69
SSB-209ENST00000470621 SLC35F4A4IF30 521 aa10.74□□□□□ -0.69
SSB-209ENST00000470621 CARNS1A5YM72 827 aa10.74□□□□□ -0.69
SSB-209ENST00000470621 CDK2AP1O14519 115 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms