RNA–Protein interactions for RNA: ENST00000470259.1

ITGA6-209, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 365 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-209ENST00000470259 CLUAP1Q96AJ1 413 aa8.57□□□□□ -1.04
ITGA6-209ENST00000470259 ZNF837Q96EG3 531 aaPredicted RBP8.57□□□□□ -1.04
ITGA6-209ENST00000470259 GPAMQ9HCL2 828 aa8.57□□□□□ -1.04
ITGA6-209ENST00000470259 NOD1Q9Y239 953 aa8.57□□□□□ -1.04
ITGA6-209ENST00000470259 HRH3Q9Y5N1 445 aa8.57□□□□□ -1.04
ITGA6-209ENST00000470259 INHAP05111 366 aa8.56□□□□□ -1.04
ITGA6-209ENST00000470259 PSME1Q06323 249 aa8.56□□□□□ -1.04
ITGA6-209ENST00000470259 DEPDC4Q8N2C3 294 aa8.56□□□□□ -1.04
ITGA6-209ENST00000470259 GTPBP3Q969Y2 492 aaKnown RBP8.56□□□□□ -1.04
ITGA6-209ENST00000470259 FHDC1Q9C0D6 1143 aaPredicted RBP8.56□□□□□ -1.04
ITGA6-209ENST00000470259 SERTAD1Q9UHV2 236 aa8.56□□□□□ -1.04
ITGA6-209ENST00000470259 C4orf17Q53FE4 359 aa8.55□□□□□ -1.04
ITGA6-209ENST00000470259 TRERF1Q96PN7 1200 aa8.55□□□□□ -1.04
ITGA6-209ENST00000470259 NUCKS1Q9H1E3 243 aaKnown RBP8.55□□□□□ -1.04
ITGA6-209ENST00000470259 A0A1B0GTH6 734 aa8.54□□□□□ -1.04
ITGA6-209ENST00000470259 LZTS3O60299 673 aaPredicted RBP8.54□□□□□ -1.04
ITGA6-209ENST00000470259 CSB-PGBD3P0DP91 1061 aa8.54□□□□□ -1.04
ITGA6-209ENST00000470259 SCNN1DP51172 638 aa8.54□□□□□ -1.04
ITGA6-209ENST00000470259 NCOA4Q13772 614 aa8.54□□□□□ -1.04
ITGA6-209ENST00000470259 PPARGC1BQ86YN6 1023 aaKnown RBP8.54□□□□□ -1.04
ITGA6-209ENST00000470259 PGBD3Q8N328 593 aa8.54□□□□□ -1.04
ITGA6-209ENST00000470259 NFATC2IPQ8NCF5 419 aa8.54□□□□□ -1.04
ITGA6-209ENST00000470259 RHBDD1Q8TEB9 315 aa8.54□□□□□ -1.04
ITGA6-209ENST00000470259 USP17L5A8MUK1 530 aa8.53□□□□□ -1.04
ITGA6-209ENST00000470259 GTF2IP78347 998 aa8.53□□□□□ -1.04
ITGA6-209ENST00000470259 SVOPQ8N4V2 548 aa8.53□□□□□ -1.04
ITGA6-209ENST00000470259 PLA2G4AP47712 749 aa8.52□□□□□ -1.05
ITGA6-209ENST00000470259 SMTNP53814 917 aa8.52□□□□□ -1.05
ITGA6-209ENST00000470259 GAS6Q14393 721 aa8.52□□□□□ -1.05
ITGA6-209ENST00000470259 PROSER2Q86WR7 435 aaPredicted RBP8.52□□□□□ -1.05
ITGA6-209ENST00000470259 ADAMTS19Q8TE59 1207 aa8.52□□□□□ -1.05
ITGA6-209ENST00000470259 PCDHGA11Q9Y5H2 935 aa8.52□□□□□ -1.05
ITGA6-209ENST00000470259 ADAMTS2O95450 1211 aa8.51□□□□□ -1.05
ITGA6-209ENST00000470259 MSX1P28360 303 aa8.51□□□□□ -1.05
ITGA6-209ENST00000470259 AIDAQ96BJ3 306 aa8.51□□□□□ -1.05
ITGA6-209ENST00000470259 NIFKQ9BYG3 293 aaKnown RBP8.51□□□□□ -1.05
ITGA6-209ENST00000470259 RUBCNLQ9H714 662 aa8.51□□□□□ -1.05
ITGA6-209ENST00000470259 TMEM229AB2RXF0 380 aa8.5□□□□□ -1.05
ITGA6-209ENST00000470259 BACH1O14867 736 aa8.5□□□□□ -1.05
ITGA6-209ENST00000470259 SLURP2P0DP57 97 aa8.5□□□□□ -1.05
ITGA6-209ENST00000470259 SRSF11Q05519 484 aaKnown RBP8.5□□□□□ -1.05
ITGA6-209ENST00000470259 TBC1D9Q6ZT07 1266 aa8.5□□□□□ -1.05
ITGA6-209ENST00000470259 WHAMMQ8TF30 809 aa8.5□□□□□ -1.05
ITGA6-209ENST00000470259 MBIPQ9NS73 344 aa8.5□□□□□ -1.05
ITGA6-209ENST00000470259 A6NJY4 79 aa8.49□□□□□ -1.05
ITGA6-209ENST00000470259 EFHC2Q5JST6 749 aa8.49□□□□□ -1.05
ITGA6-209ENST00000470259 ZNF385CQ66K41 422 aaPredicted RBP8.49□□□□□ -1.05
ITGA6-209ENST00000470259 TRIM50Q86XT4 487 aa8.49□□□□□ -1.05
ITGA6-209ENST00000470259 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.49□□□□□ -1.05
ITGA6-209ENST00000470259 USP17L3A6NCW0 530 aa8.48□□□□□ -1.05
ITGA6-209ENST00000470259 USP17L4A6NCW7 530 aa8.48□□□□□ -1.05
ITGA6-209ENST00000470259 MX2P20592 715 aa8.48□□□□□ -1.05
ITGA6-209ENST00000470259 MAP3K10Q02779 954 aa8.48□□□□□ -1.05
ITGA6-209ENST00000470259 USP17L2Q6R6M4 530 aa8.48□□□□□ -1.05
ITGA6-209ENST00000470259 USP17L1Q7RTZ2 530 aa8.48□□□□□ -1.05
ITGA6-209ENST00000470259 GLMNQ92990 594 aa8.48□□□□□ -1.05
ITGA6-209ENST00000470259 CABP1Q9NZU7 370 aa8.48□□□□□ -1.05
ITGA6-209ENST00000470259 NSFL1CQ9UNZ2 370 aaKnown RBP8.48□□□□□ -1.05
ITGA6-209ENST00000470259 IGF1RP08069 1367 aa8.48□□□□□ -1.05
ITGA6-209ENST00000470259 ATP9BO43861 1147 aa8.47□□□□□ -1.05
ITGA6-209ENST00000470259 ATP1A2P50993 1020 aa8.47□□□□□ -1.05
ITGA6-209ENST00000470259 SLC4A9Q96Q91 983 aa8.47□□□□□ -1.05
ITGA6-209ENST00000470259 UCN2Q96RP3 112 aa8.47□□□□□ -1.05
ITGA6-209ENST00000470259 ADAMTS8Q9UP79 889 aa8.47□□□□□ -1.05
ITGA6-209ENST00000470259 PHF24Q9UPV7 400 aa8.47□□□□□ -1.05
ITGA6-209ENST00000470259 CDK2AP1O14519 115 aa8.46□□□□□ -1.06
ITGA6-209ENST00000470259 LYPD4Q6UWN0 246 aa8.46□□□□□ -1.06
ITGA6-209ENST00000470259 PLEKHM2Q8IWE5 1019 aa8.46□□□□□ -1.06
ITGA6-209ENST00000470259 FNBP4Q8N3X1 1017 aaPredicted RBP8.46□□□□□ -1.06
ITGA6-209ENST00000470259 ZNF358Q9NW07 568 aa8.46□□□□□ -1.06
ITGA6-209ENST00000470259 LBRQ14739 615 aaKnown RBP8.45□□□□□ -1.06
ITGA6-209ENST00000470259 MTFR1Q15390 333 aa8.45□□□□□ -1.06
ITGA6-209ENST00000470259 NBPF1Q3BBV0 1214 aa8.45□□□□□ -1.06
ITGA6-209ENST00000470259 ARSJQ5FYB0 599 aaPredicted RBP8.45□□□□□ -1.06
ITGA6-209ENST00000470259 TPCN2Q8NHX9 752 aa8.45□□□□□ -1.06
ITGA6-209ENST00000470259 CALR3Q96L12 384 aaKnown RBP8.45□□□□□ -1.06
ITGA6-209ENST00000470259 CFHR5Q9BXR6 569 aa8.45□□□□□ -1.06
ITGA6-209ENST00000470259 MKRN1Q9UHC7 482 aaKnown RBP8.45□□□□□ -1.06
ITGA6-209ENST00000470259 RBM19Q9Y4C8 960 aaKnown RBP8.45□□□□□ -1.06
ITGA6-209ENST00000470259 A6NJR5 290 aa8.44□□□□□ -1.06
ITGA6-209ENST00000470259 THBS1P07996 1170 aa8.44□□□□□ -1.06
ITGA6-209ENST00000470259 TATP17735 454 aaPredicted RBP8.44□□□□□ -1.06
ITGA6-209ENST00000470259 MARSP56192 900 aaKnown RBP8.44□□□□□ -1.06
ITGA6-209ENST00000470259 CCDC102BQ68D86 513 aa8.44□□□□□ -1.06
ITGA6-209ENST00000470259 C1orf216Q8TAB5 229 aa8.44□□□□□ -1.06
ITGA6-209ENST00000470259 ENAMQ9NRM1 1142 aa8.44□□□□□ -1.06
ITGA6-209ENST00000470259 DNAAF2Q9NVR5 837 aaKnown RBP8.44□□□□□ -1.06
ITGA6-209ENST00000470259 TFIP11Q9UBB9 837 aaKnown RBP8.44□□□□□ -1.06
ITGA6-209ENST00000470259 USP3Q9Y6I4 520 aa8.44□□□□□ -1.06
ITGA6-209ENST00000470259 CELA2BP08218 269 aaPredicted RBP8.43□□□□□ -1.06
ITGA6-209ENST00000470259 TNS4Q8IZW8 715 aa8.43□□□□□ -1.06
ITGA6-209ENST00000470259 OGFOD1Q8N543 542 aa8.43□□□□□ -1.06
ITGA6-209ENST00000470259 PARP3Q9Y6F1 533 aa8.43□□□□□ -1.06
ITGA6-209ENST00000470259 GJA3Q9Y6H8 435 aa8.43□□□□□ -1.06
ITGA6-209ENST00000470259 ZBTB7BO15156 539 aaPredicted RBP8.42□□□□□ -1.06
ITGA6-209ENST00000470259 CLDN10P78369 228 aa8.42□□□□□ -1.06
ITGA6-209ENST00000470259 BICDL1Q6ZP65 573 aa8.42□□□□□ -1.06
ITGA6-209ENST00000470259 CRISPLD1Q9H336 500 aa8.42□□□□□ -1.06
ITGA6-209ENST00000470259 SCHIP1Q9P0W5 487 aaPredicted RBP8.42□□□□□ -1.06
ITGA6-209ENST00000470259 IQSEC3Q9UPP2 1182 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms