RNA–Protein interactions for RNA: ENST00000469896.1

COMMD2-202, Transcript of COMM domain containing 2, humanhuman

TSL 1 (best)

Gene COMMD2, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-202ENST00000469896 AIDAQ96BJ3 306 aa16.25■□□□□ 0.19
COMMD2-202ENST00000469896 USP31Q70CQ4 1352 aa16.25■□□□□ 0.19
COMMD2-202ENST00000469896 TNRC6CQ9HCJ0 1690 aaKnown RBP16.24■□□□□ 0.19
COMMD2-202ENST00000469896 SMARCC1Q92922 1105 aaPredicted RBP16.24■□□□□ 0.19
COMMD2-202ENST00000469896 C4BP0C0L5 1744 aa16.23■□□□□ 0.19
COMMD2-202ENST00000469896 CTCFP49711 727 aaPredicted RBP16.23■□□□□ 0.19
COMMD2-202ENST00000469896 AMIGO3Q86WK7 504 aa16.23■□□□□ 0.19
COMMD2-202ENST00000469896 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.23■□□□□ 0.19
COMMD2-202ENST00000469896 LTV1Q96GA3 475 aaPredicted RBP16.23■□□□□ 0.19
COMMD2-202ENST00000469896 FOXN1O15353 648 aa16.22■□□□□ 0.19
COMMD2-202ENST00000469896 VEGFAP15692 232 aaPredicted RBP16.22■□□□□ 0.19
COMMD2-202ENST00000469896 DPEP1P16444 411 aa16.22■□□□□ 0.19
COMMD2-202ENST00000469896 ZC3H4Q9UPT8 1303 aaKnown RBP16.21■□□□□ 0.19
COMMD2-202ENST00000469896 NBPF1Q3BBV0 1214 aa16.21■□□□□ 0.19
COMMD2-202ENST00000469896 IP6K1Q92551 441 aa16.21■□□□□ 0.19
COMMD2-202ENST00000469896 ABHD8Q96I13 439 aa16.21■□□□□ 0.19
COMMD2-202ENST00000469896 CCDC87Q9NVE4 849 aa16.21■□□□□ 0.19
COMMD2-202ENST00000469896 KIAA1210Q9ULL0 1709 aa16.21■□□□□ 0.19
COMMD2-202ENST00000469896 CGNL1Q0VF96 1302 aa16.2■□□□□ 0.18
COMMD2-202ENST00000469896 MPRIPQ6WCQ1 1025 aa16.2■□□□□ 0.18
COMMD2-202ENST00000469896 SMIM5Q71RC9 77 aa16.2■□□□□ 0.18
COMMD2-202ENST00000469896 FAM208AQ9UK61 1670 aaKnown RBP16.2■□□□□ 0.18
COMMD2-202ENST00000469896 LTN1O94822 1766 aa16.2■□□□□ 0.18
COMMD2-202ENST00000469896 PKD1L3Q7Z443 1732 aa16.19■□□□□ 0.18
COMMD2-202ENST00000469896 DALRD3Q5D0E6 543 aaKnown RBP16.19■□□□□ 0.18
COMMD2-202ENST00000469896 NLGN1Q8N2Q7 840 aa16.19■□□□□ 0.18
COMMD2-202ENST00000469896 PIM2Q9P1W9 311 aa16.19■□□□□ 0.18
COMMD2-202ENST00000469896 MKRN1Q9UHC7 482 aaKnown RBP16.19■□□□□ 0.18
COMMD2-202ENST00000469896 GNPATO15228 680 aa16.18■□□□□ 0.18
COMMD2-202ENST00000469896 GABBR2O75899 941 aa16.18■□□□□ 0.18
COMMD2-202ENST00000469896 NME9Q86XW9 330 aa16.18■□□□□ 0.18
COMMD2-202ENST00000469896 DCAF5Q96JK2 942 aa16.18■□□□□ 0.18
COMMD2-202ENST00000469896 TAF1LQ8IZX4 1826 aa16.17■□□□□ 0.18
COMMD2-202ENST00000469896 KIF13BQ9NQT8 1826 aa16.17■□□□□ 0.18
COMMD2-202ENST00000469896 TOGARAM1Q9Y4F4 1720 aa16.17■□□□□ 0.18
COMMD2-202ENST00000469896 CD44P16070 742 aaKnown RBP16.17■□□□□ 0.18
COMMD2-202ENST00000469896 N4BP2Q86UW6 1770 aaPredicted RBP16.17■□□□□ 0.18
COMMD2-202ENST00000469896 MEGF6O75095 1541 aa16.16■□□□□ 0.18
COMMD2-202ENST00000469896 RAPGEF4Q8WZA2 1011 aa16.16■□□□□ 0.18
COMMD2-202ENST00000469896 UBR3Q6ZT12 1888 aa16.16■□□□□ 0.18
COMMD2-202ENST00000469896 TMF1P82094 1093 aa16.15■□□□□ 0.18
COMMD2-202ENST00000469896 KIAA1551Q9HCM1 1747 aa16.15■□□□□ 0.18
COMMD2-202ENST00000469896 PCDH11XQ9BZA7 1347 aa16.15■□□□□ 0.18
COMMD2-202ENST00000469896 PCDH11YQ9BZA8 1340 aa16.15■□□□□ 0.18
COMMD2-202ENST00000469896 GLTPD2A6NH11 291 aa16.14■□□□□ 0.17
COMMD2-202ENST00000469896 PARP3Q9Y6F1 533 aa16.14■□□□□ 0.17
COMMD2-202ENST00000469896 RGS19P49795 217 aa16.13■□□□□ 0.17
COMMD2-202ENST00000469896 LBX1P52954 281 aa16.13■□□□□ 0.17
COMMD2-202ENST00000469896 LINC00116Q8NCU8 138 aa16.13■□□□□ 0.17
COMMD2-202ENST00000469896 LOC102724428A0A0B4J2F2 783 aa16.12■□□□□ 0.17
COMMD2-202ENST00000469896 CCDC85CA6NKD9 419 aa16.12■□□□□ 0.17
COMMD2-202ENST00000469896 KCNA3P22001 575 aa16.12■□□□□ 0.17
COMMD2-202ENST00000469896 SIK1P57059 783 aa16.12■□□□□ 0.17
COMMD2-202ENST00000469896 CNTNAP1P78357 1384 aa16.12■□□□□ 0.17
COMMD2-202ENST00000469896 ARFGEF1Q9Y6D6 1849 aa16.11■□□□□ 0.17
COMMD2-202ENST00000469896 TATP17735 454 aaPredicted RBP16.11■□□□□ 0.17
COMMD2-202ENST00000469896 AMPHP49418 695 aa16.11■□□□□ 0.17
COMMD2-202ENST00000469896 TRAPPC3LQ5T215 181 aa16.11■□□□□ 0.17
COMMD2-202ENST00000469896 SBNO2Q9Y2G9 1366 aa16.11■□□□□ 0.17
COMMD2-202ENST00000469896 LMNB1P20700 586 aa16.1■□□□□ 0.17
COMMD2-202ENST00000469896 HDGFL2Q7Z4V5 671 aaPredicted RBP16.1■□□□□ 0.17
COMMD2-202ENST00000469896 RTCBQ9Y3I0 505 aaKnown RBP16.1■□□□□ 0.17
COMMD2-202ENST00000469896 MON2Q7Z3U7 1717 aa16.1■□□□□ 0.17
COMMD2-202ENST00000469896 HOXC9P31274 260 aa16.09■□□□□ 0.17
COMMD2-202ENST00000469896 MNX1P50219 401 aaPredicted RBP16.09■□□□□ 0.17
COMMD2-202ENST00000469896 BRCA1P38398 1863 aaKnown RBP16.08■□□□□ 0.17
COMMD2-202ENST00000469896 ATP6V1AP38606 617 aa16.08■□□□□ 0.16
COMMD2-202ENST00000469896 WBP1LQ9NX94 342 aa16.08■□□□□ 0.16
COMMD2-202ENST00000469896 DPY19L2Q6NUT2 758 aa16.07■□□□□ 0.16
COMMD2-202ENST00000469896 PIGBQ92521 554 aa16.07■□□□□ 0.16
COMMD2-202ENST00000469896 EDC4Q6P2E9 1401 aaKnown RBP16.07■□□□□ 0.16
COMMD2-202ENST00000469896 CD163L1Q9NR16 1453 aa16.07■□□□□ 0.16
COMMD2-202ENST00000469896 C4AP0C0L4 1744 aa16.06■□□□□ 0.16
COMMD2-202ENST00000469896 KDM6AO15550 1401 aaPredicted RBP16.06■□□□□ 0.16
COMMD2-202ENST00000469896 SMG6Q86US8 1419 aaKnown RBP16.06■□□□□ 0.16
COMMD2-202ENST00000469896 RAB3GAP2Q9H2M9 1393 aa16.06■□□□□ 0.16
COMMD2-202ENST00000469896 MAP3K19Q56UN5 1328 aa16.06■□□□□ 0.16
COMMD2-202ENST00000469896 RFC4P35249 363 aa16.06■□□□□ 0.16
COMMD2-202ENST00000469896 RASSF7Q02833 373 aa16.05■□□□□ 0.16
COMMD2-202ENST00000469896 ITPK1Q13572 414 aa16.05■□□□□ 0.16
COMMD2-202ENST00000469896 NBPF6Q5VWK0 638 aa16.05■□□□□ 0.16
COMMD2-202ENST00000469896 TMC1Q8TDI8 760 aa16.05■□□□□ 0.16
COMMD2-202ENST00000469896 NBPF4Q96M43 638 aa16.05■□□□□ 0.16
COMMD2-202ENST00000469896 HSPA8P11142 646 aaKnown RBP16.04■□□□□ 0.16
COMMD2-202ENST00000469896 GYS1P13807 737 aa16.04■□□□□ 0.16
COMMD2-202ENST00000469896 VEGFBP49765 207 aa16.04■□□□□ 0.16
COMMD2-202ENST00000469896 USHBP1Q8N6Y0 703 aa16.04■□□□□ 0.16
COMMD2-202ENST00000469896 TERF2IPQ9NYB0 399 aa16.04■□□□□ 0.16
COMMD2-202ENST00000469896 MAP2K1Q02750 393 aaPredicted RBP16.03■□□□□ 0.16
COMMD2-202ENST00000469896 CFAP44Q96MT7 982 aa16.03■□□□□ 0.16
COMMD2-202ENST00000469896 TMOD3Q9NYL9 352 aa16.03■□□□□ 0.16
COMMD2-202ENST00000469896 RTL1A6NKG5 1358 aa16.02■□□□□ 0.16
COMMD2-202ENST00000469896 CYP27B1O15528 508 aa16.02■□□□□ 0.16
COMMD2-202ENST00000469896 CHRNA5P30532 468 aa16.02■□□□□ 0.16
COMMD2-202ENST00000469896 ARHGEF1Q92888 912 aaKnown RBP16.02■□□□□ 0.16
COMMD2-202ENST00000469896 COG3Q96JB2 828 aa16.02■□□□□ 0.16
COMMD2-202ENST00000469896 PDE4DIPQ5VU43 2346 aa16.01■□□□□ 0.15
COMMD2-202ENST00000469896 SBF1O95248 1867 aa16.01■□□□□ 0.15
COMMD2-202ENST00000469896 TMEM88BA6NKF7 163 aa16■□□□□ 0.15
COMMD2-202ENST00000469896 POTECB2RU33 542 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms