RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 TSHZ3Q63HK5 1081 aa18.17■□□□□ 0.5
CBWD3-205ENST00000469687 LGR6Q9HBX8 967 aa18.17■□□□□ 0.5
CBWD3-205ENST00000469687 ADGRL3Q9HAR2 1447 aa18.16■□□□□ 0.5
CBWD3-205ENST00000469687 LRRC59Q96AG4 307 aaKnown RBP18.16■□□□□ 0.5
CBWD3-205ENST00000469687 PHAXQ9H814 394 aaKnown RBP18.16■□□□□ 0.5
CBWD3-205ENST00000469687 N4BP2Q86UW6 1770 aaPredicted RBP18.16■□□□□ 0.5
CBWD3-205ENST00000469687 K7ELQ4 463 aaPredicted RBP18.15■□□□□ 0.5
CBWD3-205ENST00000469687 USP26Q9BXU7 913 aa18.15■□□□□ 0.5
CBWD3-205ENST00000469687 AK9Q5TCS8 1911 aa18.15■□□□□ 0.5
CBWD3-205ENST00000469687 CEMIPQ8WUJ3 1361 aa18.14■□□□□ 0.5
CBWD3-205ENST00000469687 HDGFL1Q5TGJ6 251 aa18.14■□□□□ 0.49
CBWD3-205ENST00000469687 ORAI2Q96SN7 254 aa18.14■□□□□ 0.49
CBWD3-205ENST00000469687 PDE1AP54750 535 aa18.14■□□□□ 0.49
CBWD3-205ENST00000469687 GZF1Q9H116 711 aaPredicted RBP18.14■□□□□ 0.49
CBWD3-205ENST00000469687 TUBGCP6Q96RT7 1819 aa18.13■□□□□ 0.49
CBWD3-205ENST00000469687 KCNQ3O43525 872 aa18.13■□□□□ 0.49
CBWD3-205ENST00000469687 TNPO1Q92973 898 aaKnown RBP18.13■□□□□ 0.49
CBWD3-205ENST00000469687 LRRFIP2Q9Y608 721 aaKnown RBP18.13■□□□□ 0.49
CBWD3-205ENST00000469687 EIF2S2P20042 333 aaKnown RBP18.13■□□□□ 0.49
CBWD3-205ENST00000469687 HSP90AA1P07900 732 aaKnown RBP18.12■□□□□ 0.49
CBWD3-205ENST00000469687 USP44Q9H0E7 712 aa18.12■□□□□ 0.49
CBWD3-205ENST00000469687 BABAM1Q9NWV8 329 aa18.12■□□□□ 0.49
CBWD3-205ENST00000469687 MED1Q15648 1581 aaPredicted RBP18.12■□□□□ 0.49
CBWD3-205ENST00000469687 KDM3BQ7LBC6 1761 aa18.11■□□□□ 0.49
CBWD3-205ENST00000469687 GNAI3P08754 354 aa18.11■□□□□ 0.49
CBWD3-205ENST00000469687 TRAK2O60296 914 aa18.11■□□□□ 0.49
CBWD3-205ENST00000469687 ATP8B2P98198 1209 aa18.11■□□□□ 0.49
CBWD3-205ENST00000469687 ARXQ96QS3 562 aa18.11■□□□□ 0.49
CBWD3-205ENST00000469687 OSBPL3Q9H4L5 887 aa18.11■□□□□ 0.49
CBWD3-205ENST00000469687 SALL3Q9BXA9 1300 aa18.11■□□□□ 0.49
CBWD3-205ENST00000469687 EIF4A1P60842 406 aaKnown RBP18.1■□□□□ 0.49
CBWD3-205ENST00000469687 PHRF1Q9P1Y6 1649 aaKnown RBP18.1■□□□□ 0.49
CBWD3-205ENST00000469687 RAB3GAP1Q15042 981 aa18.1■□□□□ 0.49
CBWD3-205ENST00000469687 MPRIPQ6WCQ1 1025 aa18.1■□□□□ 0.49
CBWD3-205ENST00000469687 KCNH5Q8NCM2 988 aa18.1■□□□□ 0.49
CBWD3-205ENST00000469687 SOS1Q07889 1333 aaPredicted RBP18.1■□□□□ 0.49
CBWD3-205ENST00000469687 ADAMTSL3P82987 1691 aa18.09■□□□□ 0.49
CBWD3-205ENST00000469687 ANXA1P04083 346 aa18.09■□□□□ 0.49
CBWD3-205ENST00000469687 LRRCC1Q9C099 1032 aa18.09■□□□□ 0.49
CBWD3-205ENST00000469687 CHPF2Q9P2E5 772 aa18.09■□□□□ 0.49
CBWD3-205ENST00000469687 CIZ1Q9ULV3 898 aaPredicted RBP18.09■□□□□ 0.49
CBWD3-205ENST00000469687 PXDNLA1KZ92 1463 aa18.09■□□□□ 0.49
CBWD3-205ENST00000469687 PXDNQ92626 1479 aa18.09■□□□□ 0.49
CBWD3-205ENST00000469687 LMO7Q8WWI1 1683 aa18.09■□□□□ 0.49
CBWD3-205ENST00000469687 NPHP4O75161 1426 aaPredicted RBP18.08■□□□□ 0.49
CBWD3-205ENST00000469687 IBTKQ9P2D0 1353 aaPredicted RBP18.08■□□□□ 0.49
CBWD3-205ENST00000469687 GCP02774 474 aa18.08■□□□□ 0.49
CBWD3-205ENST00000469687 RABEP1Q15276 862 aa18.08■□□□□ 0.49
CBWD3-205ENST00000469687 LMOD2Q6P5Q4 547 aa18.08■□□□□ 0.49
CBWD3-205ENST00000469687 ZNF530Q6P9A1 599 aaPredicted RBP18.08■□□□□ 0.49
CBWD3-205ENST00000469687 CASC1Q6TDU7 716 aa18.08■□□□□ 0.48
CBWD3-205ENST00000469687 UBTFL1P0CB47 393 aaPredicted RBP18.07■□□□□ 0.48
CBWD3-205ENST00000469687 DDX11L8A8MPP1 907 aa18.07■□□□□ 0.48
CBWD3-205ENST00000469687 MX1P20591 662 aa18.07■□□□□ 0.48
CBWD3-205ENST00000469687 ARHGEF25Q86VW2 580 aa18.07■□□□□ 0.48
CBWD3-205ENST00000469687 RGPD5Q99666 1765 aa18.06■□□□□ 0.48
CBWD3-205ENST00000469687 ERC2O15083 957 aa18.06■□□□□ 0.48
CBWD3-205ENST00000469687 SSFA2P28290 1259 aa18.06■□□□□ 0.48
CBWD3-205ENST00000469687 AKAP4Q5JQC9 854 aa18.06■□□□□ 0.48
CBWD3-205ENST00000469687 AXIN2Q9Y2T1 843 aa18.06■□□□□ 0.48
CBWD3-205ENST00000469687 BTBD11A6QL63 1104 aa18.05■□□□□ 0.48
CBWD3-205ENST00000469687 IL1RAPL2Q9NP60 686 aa18.05■□□□□ 0.48
CBWD3-205ENST00000469687 NBPF7P0C2Y1 421 aaPredicted RBP18.04■□□□□ 0.48
CBWD3-205ENST00000469687 TEFQ10587 303 aa18.04■□□□□ 0.48
CBWD3-205ENST00000469687 SLIT3O75094 1523 aa18.04■□□□□ 0.48
CBWD3-205ENST00000469687 PI4KAP2A4QPH2 592 aa18.04■□□□□ 0.48
CBWD3-205ENST00000469687 EIF5BO60841 1220 aaKnown RBP18.04■□□□□ 0.48
CBWD3-205ENST00000469687 REC8O95072 547 aa18.04■□□□□ 0.48
CBWD3-205ENST00000469687 PI4KAP1Q8N8J0 262 aa18.04■□□□□ 0.48
CBWD3-205ENST00000469687 SRCIN1Q9C0H9 1055 aa18.04■□□□□ 0.48
CBWD3-205ENST00000469687 TRPM3Q9HCF6 1732 aaPredicted RBP18.04■□□□□ 0.48
CBWD3-205ENST00000469687 PPP1R42Q7Z4L9 355 aa18.03■□□□□ 0.48
CBWD3-205ENST00000469687 UNC5CLQ8IV45 518 aa18.03■□□□□ 0.48
CBWD3-205ENST00000469687 SSH3Q8TE77 659 aa18.03■□□□□ 0.48
CBWD3-205ENST00000469687 ANKRD24Q8TF21 1146 aa18.03■□□□□ 0.48
CBWD3-205ENST00000469687 PLEKHO1Q53GL0 409 aaPredicted RBP18.03■□□□□ 0.48
CBWD3-205ENST00000469687 FSD2A1L4K1 749 aa18.02■□□□□ 0.48
CBWD3-205ENST00000469687 PRAMEF22A3QJZ6 481 aa18.02■□□□□ 0.48
CBWD3-205ENST00000469687 RNMTO43148 476 aaKnown RBP18.02■□□□□ 0.48
CBWD3-205ENST00000469687 RILPL2Q969X0 211 aa18.02■□□□□ 0.48
CBWD3-205ENST00000469687 BEND3Q5T5X7 828 aa18.01■□□□□ 0.47
CBWD3-205ENST00000469687 NUTM1Q86Y26 1132 aa18.01■□□□□ 0.47
CBWD3-205ENST00000469687 GBP4Q96PP9 640 aa18.01■□□□□ 0.47
CBWD3-205ENST00000469687 NCAPD2Q15021 1401 aa18.01■□□□□ 0.47
CBWD3-205ENST00000469687 ADCY9O60503 1353 aa18.01■□□□□ 0.47
CBWD3-205ENST00000469687 TRIM6-TRIM34B2RNG4 842 aa18.01■□□□□ 0.47
CBWD3-205ENST00000469687 DNAAF4Q8WXU2 420 aa18.01■□□□□ 0.47
CBWD3-205ENST00000469687 ESYT1Q9BSJ8 1104 aa18.01■□□□□ 0.47
CBWD3-205ENST00000469687 GOLGA6L3A6NEY3 463 aa18■□□□□ 0.47
CBWD3-205ENST00000469687 HOXB7P09629 217 aa18■□□□□ 0.47
CBWD3-205ENST00000469687 XRCC6P12956 609 aaKnown RBP eCLIP18■□□□□ 0.47
CBWD3-205ENST00000469687 PROSER3Q2NL68 480 aa18■□□□□ 0.47
CBWD3-205ENST00000469687 C1orf141Q5JVX7 400 aa18■□□□□ 0.47
CBWD3-205ENST00000469687 STAP2Q9UGK3 403 aa18■□□□□ 0.47
CBWD3-205ENST00000469687 SRGAP3O43295 1099 aa18■□□□□ 0.47
CBWD3-205ENST00000469687 SURF6O75683 361 aaKnown RBP18■□□□□ 0.47
CBWD3-205ENST00000469687 PKP1Q13835 747 aa18■□□□□ 0.47
CBWD3-205ENST00000469687 L1TD1Q5T7N2 865 aaKnown RBP18■□□□□ 0.47
CBWD3-205ENST00000469687 KRT28Q7Z3Y7 464 aa18■□□□□ 0.47
CBWD3-205ENST00000469687 CHMLP26374 656 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms