RNA–Protein interactions for RNA: ENST00000469672.5

ABCD4-205, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-205ENST00000469672 SSFA2P28290 1259 aa17.52■□□□□ 0.4
ABCD4-205ENST00000469672 ITPK1Q13572 414 aa17.52■□□□□ 0.4
ABCD4-205ENST00000469672 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.51■□□□□ 0.39
ABCD4-205ENST00000469672 DIAPH1O60610 1272 aaKnown RBP17.51■□□□□ 0.39
ABCD4-205ENST00000469672 C4BP0C0L5 1744 aa17.51■□□□□ 0.39
ABCD4-205ENST00000469672 AMIGO3Q86WK7 504 aa17.51■□□□□ 0.39
ABCD4-205ENST00000469672 KDM6AO15550 1401 aaPredicted RBP17.5■□□□□ 0.39
ABCD4-205ENST00000469672 AKAP4Q5JQC9 854 aa17.49■□□□□ 0.39
ABCD4-205ENST00000469672 MSL1Q68DK7 614 aa17.49■□□□□ 0.39
ABCD4-205ENST00000469672 KLHL34Q8N239 644 aa17.49■□□□□ 0.39
ABCD4-205ENST00000469672 NFATC2IPQ8NCF5 419 aa17.49■□□□□ 0.39
ABCD4-205ENST00000469672 SLC4A9Q96Q91 983 aa17.49■□□□□ 0.39
ABCD4-205ENST00000469672 RC3H1Q5TC82 1133 aaKnown RBP17.48■□□□□ 0.39
ABCD4-205ENST00000469672 RBM42Q9BTD8 480 aaKnown RBP17.48■□□□□ 0.39
ABCD4-205ENST00000469672 GNPATO15228 680 aa17.47■□□□□ 0.39
ABCD4-205ENST00000469672 PHF14O94880 888 aa17.47■□□□□ 0.39
ABCD4-205ENST00000469672 HMOX1P09601 288 aa17.47■□□□□ 0.39
ABCD4-205ENST00000469672 GPR162Q16538 588 aa17.47■□□□□ 0.39
ABCD4-205ENST00000469672 SMIM5Q71RC9 77 aa17.47■□□□□ 0.39
ABCD4-205ENST00000469672 CD2APQ9Y5K6 639 aa17.47■□□□□ 0.39
ABCD4-205ENST00000469672 NLGN2Q8NFZ4 835 aa17.46■□□□□ 0.39
ABCD4-205ENST00000469672 UBR3Q6ZT12 1888 aa17.46■□□□□ 0.38
ABCD4-205ENST00000469672 RTCBQ9Y3I0 505 aaKnown RBP17.45■□□□□ 0.38
ABCD4-205ENST00000469672 UTRNP46939 3433 aa17.44■□□□□ 0.38
ABCD4-205ENST00000469672 TRAPPC3LQ5T215 181 aa17.44■□□□□ 0.38
ABCD4-205ENST00000469672 ZNF831Q5JPB2 1677 aa17.44■□□□□ 0.38
ABCD4-205ENST00000469672 CNTNAP4Q9C0A0 1308 aa17.44■□□□□ 0.38
ABCD4-205ENST00000469672 PTCD1O75127 700 aaKnown RBP17.43■□□□□ 0.38
ABCD4-205ENST00000469672 RPS6KA4O75676 772 aa17.43■□□□□ 0.38
ABCD4-205ENST00000469672 ADRA2BP18089 450 aa17.43■□□□□ 0.38
ABCD4-205ENST00000469672 CNGB1Q14028 1251 aaPredicted RBP17.43■□□□□ 0.38
ABCD4-205ENST00000469672 MTHFSDQ2M296 383 aaKnown RBP17.43■□□□□ 0.38
ABCD4-205ENST00000469672 SLC52A2Q9HAB3 445 aa17.43■□□□□ 0.38
ABCD4-205ENST00000469672 LGR6Q9HBX8 967 aa17.43■□□□□ 0.38
ABCD4-205ENST00000469672 RNMTO43148 476 aaKnown RBP17.42■□□□□ 0.38
ABCD4-205ENST00000469672 ARHGEF1Q92888 912 aaKnown RBP17.41■□□□□ 0.38
ABCD4-205ENST00000469672 COL3A1P02461 1466 aaPredicted RBP17.4■□□□□ 0.38
ABCD4-205ENST00000469672 U2SURPO15042 1029 aaKnown RBP17.4■□□□□ 0.38
ABCD4-205ENST00000469672 GRIN3BO60391 1043 aa17.4■□□□□ 0.38
ABCD4-205ENST00000469672 NLGN1Q8N2Q7 840 aa17.4■□□□□ 0.38
ABCD4-205ENST00000469672 PELP1Q8IZL8 1130 aaKnown RBP17.39■□□□□ 0.37
ABCD4-205ENST00000469672 CFAP53Q96M91 514 aa17.39■□□□□ 0.37
ABCD4-205ENST00000469672 SCN11AQ9UI33 1791 aa17.38■□□□□ 0.37
ABCD4-205ENST00000469672 RFC4P35249 363 aa17.38■□□□□ 0.37
ABCD4-205ENST00000469672 CRKLP46109 303 aaKnown RBP17.38■□□□□ 0.37
ABCD4-205ENST00000469672 ZNF784Q8NCA9 323 aaPredicted RBP17.38■□□□□ 0.37
ABCD4-205ENST00000469672 CHD4Q14839 1912 aa17.37■□□□□ 0.37
ABCD4-205ENST00000469672 YBX3P16989 372 aaKnown RBP eCLIP17.37■□□□□ 0.37
ABCD4-205ENST00000469672 GAS2L2Q8NHY3 880 aa17.37■□□□□ 0.37
ABCD4-205ENST00000469672 GOLGB1Q14789 3259 aaKnown RBP17.36■□□□□ 0.37
ABCD4-205ENST00000469672 MMP10P09238 476 aa17.36■□□□□ 0.37
ABCD4-205ENST00000469672 GYS1P13807 737 aa17.36■□□□□ 0.37
ABCD4-205ENST00000469672 PPP2R1AP30153 589 aa17.36■□□□□ 0.37
ABCD4-205ENST00000469672 NUDCQ9Y266 331 aa17.36■□□□□ 0.37
ABCD4-205ENST00000469672 GNAT3A8MTJ3 354 aa17.35■□□□□ 0.37
ABCD4-205ENST00000469672 SLC39A6Q13433 755 aa17.35■□□□□ 0.37
ABCD4-205ENST00000469672 INTS5Q6P9B9 1019 aaKnown RBP17.35■□□□□ 0.37
ABCD4-205ENST00000469672 MRC1P22897 1456 aa17.35■□□□□ 0.37
ABCD4-205ENST00000469672 COL5A3P25940 1745 aaPredicted RBP17.35■□□□□ 0.37
ABCD4-205ENST00000469672 MYH14Q7Z406 1995 aaKnown RBP17.35■□□□□ 0.37
ABCD4-205ENST00000469672 VSIG10Q8N0Z9 540 aa17.34■□□□□ 0.37
ABCD4-205ENST00000469672 IL17REQ8NFR9 667 aa17.34■□□□□ 0.37
ABCD4-205ENST00000469672 CYP19A1P11511 503 aaPredicted RBP17.33■□□□□ 0.36
ABCD4-205ENST00000469672 DNAJC10Q8IXB1 793 aa17.33■□□□□ 0.36
ABCD4-205ENST00000469672 RSPH6AQ9H0K4 717 aa17.33■□□□□ 0.36
ABCD4-205ENST00000469672 CCDC87Q9NVE4 849 aa17.33■□□□□ 0.36
ABCD4-205ENST00000469672 ADAMTS7Q9UKP4 1686 aa17.32■□□□□ 0.36
ABCD4-205ENST00000469672 PHACTR3Q96KR7 559 aa17.32■□□□□ 0.36
ABCD4-205ENST00000469672 CICQ96RK0 1608 aaPredicted RBP17.32■□□□□ 0.36
ABCD4-205ENST00000469672 FCHSD2O94868 740 aa17.31■□□□□ 0.36
ABCD4-205ENST00000469672 PRKAR2BP31323 418 aa17.31■□□□□ 0.36
ABCD4-205ENST00000469672 TGFB2P61812 414 aa17.31■□□□□ 0.36
ABCD4-205ENST00000469672 TEFQ10587 303 aa17.31■□□□□ 0.36
ABCD4-205ENST00000469672 USP42Q9H9J4 1324 aaKnown RBP17.3■□□□□ 0.36
ABCD4-205ENST00000469672 U2AF1L5P0DN76 240 aaPredicted RBP17.3■□□□□ 0.36
ABCD4-205ENST00000469672 U2AF1Q01081 240 aaKnown RBP eCLIP17.3■□□□□ 0.36
ABCD4-205ENST00000469672 PARP3Q9Y6F1 533 aa17.3■□□□□ 0.36
ABCD4-205ENST00000469672 TTC5Q8N0Z6 440 aa17.29■□□□□ 0.36
ABCD4-205ENST00000469672 SRP68Q9UHB9 627 aaKnown RBP17.29■□□□□ 0.36
ABCD4-205ENST00000469672 TJP1Q07157 1748 aa17.29■□□□□ 0.36
ABCD4-205ENST00000469672 SOS1Q07889 1333 aaPredicted RBP17.28■□□□□ 0.36
ABCD4-205ENST00000469672 KCPQ6ZWJ8 1503 aa17.28■□□□□ 0.36
ABCD4-205ENST00000469672 FKBP8Q14318 412 aa17.28■□□□□ 0.36
ABCD4-205ENST00000469672 ZNF790Q6PG37 636 aa17.28■□□□□ 0.36
ABCD4-205ENST00000469672 CEMIPQ8WUJ3 1361 aa17.28■□□□□ 0.36
ABCD4-205ENST00000469672 ZPR1O75312 459 aa17.27■□□□□ 0.36
ABCD4-205ENST00000469672 STARD3NLO95772 234 aa17.27■□□□□ 0.36
ABCD4-205ENST00000469672 TM4SF1P30408 202 aa17.27■□□□□ 0.36
ABCD4-205ENST00000469672 TEX13AQ9BXU3 409 aaPredicted RBP17.27■□□□□ 0.36
ABCD4-205ENST00000469672 ZNF496Q96IT1 587 aaPredicted RBP17.26■□□□□ 0.35
ABCD4-205ENST00000469672 NARFQ9UHQ1 456 aa17.26■□□□□ 0.35
ABCD4-205ENST00000469672 ZBTB1Q9Y2K1 713 aa17.26■□□□□ 0.35
ABCD4-205ENST00000469672 VIRMAQ69YN4 1812 aaKnown RBP17.26■□□□□ 0.35
ABCD4-205ENST00000469672 C10orf71Q711Q0 1435 aa17.25■□□□□ 0.35
ABCD4-205ENST00000469672 A0A0G2JLW4 131 aa17.24■□□□□ 0.35
ABCD4-205ENST00000469672 HTATSF1O43719 755 aaKnown RBP17.24■□□□□ 0.35
ABCD4-205ENST00000469672 USPL1Q5W0Q7 1092 aa17.24■□□□□ 0.35
ABCD4-205ENST00000469672 RTF1Q92541 710 aaKnown RBP17.24■□□□□ 0.35
ABCD4-205ENST00000469672 FMNL2Q96PY5 1086 aa17.24■□□□□ 0.35
ABCD4-205ENST00000469672 HEG1Q9ULI3 1381 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms