RNA–Protein interactions for RNA: ENST00000469528.5

GAPVD1-214, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 466 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-214ENST00000469528 TAF1LQ8IZX4 1826 aa17.37■□□□□ 0.37
GAPVD1-214ENST00000469528 PCGF6Q9BYE7 350 aa17.37■□□□□ 0.37
GAPVD1-214ENST00000469528 IGSF1Q8N6C5 1336 aa17.37■□□□□ 0.37
GAPVD1-214ENST00000469528 PKD1L3Q7Z443 1732 aa17.36■□□□□ 0.37
GAPVD1-214ENST00000469528 ADRA2BP18089 450 aa17.36■□□□□ 0.37
GAPVD1-214ENST00000469528 RC3H1Q5TC82 1133 aaKnown RBP17.36■□□□□ 0.37
GAPVD1-214ENST00000469528 RBM42Q9BTD8 480 aaKnown RBP17.36■□□□□ 0.37
GAPVD1-214ENST00000469528 CABP4P57796 275 aa17.35■□□□□ 0.37
GAPVD1-214ENST00000469528 TGFB2P61812 414 aa17.35■□□□□ 0.37
GAPVD1-214ENST00000469528 ITPK1Q13572 414 aa17.35■□□□□ 0.37
GAPVD1-214ENST00000469528 PANK3Q9H999 370 aa17.35■□□□□ 0.37
GAPVD1-214ENST00000469528 RFC4P35249 363 aa17.34■□□□□ 0.37
GAPVD1-214ENST00000469528 C1orf141Q5JVX7 400 aa17.34■□□□□ 0.37
GAPVD1-214ENST00000469528 AMIGO3Q86WK7 504 aa17.34■□□□□ 0.37
GAPVD1-214ENST00000469528 MMP10P09238 476 aa17.33■□□□□ 0.36
GAPVD1-214ENST00000469528 MTHFSP49914 203 aa17.33■□□□□ 0.36
GAPVD1-214ENST00000469528 MORC1Q86VD1 984 aa17.33■□□□□ 0.36
GAPVD1-214ENST00000469528 ATP10DQ9P241 1426 aa17.32■□□□□ 0.36
GAPVD1-214ENST00000469528 ZNF530Q6P9A1 599 aaPredicted RBP17.32■□□□□ 0.36
GAPVD1-214ENST00000469528 SMIM5Q71RC9 77 aa17.32■□□□□ 0.36
GAPVD1-214ENST00000469528 RPS6KA4O75676 772 aa17.31■□□□□ 0.36
GAPVD1-214ENST00000469528 CCDC87Q9NVE4 849 aa17.31■□□□□ 0.36
GAPVD1-214ENST00000469528 KNSTRNQ9Y448 316 aa17.31■□□□□ 0.36
GAPVD1-214ENST00000469528 UBR3Q6ZT12 1888 aa17.31■□□□□ 0.36
GAPVD1-214ENST00000469528 ANKRD26Q9UPS8 1709 aa17.3■□□□□ 0.36
GAPVD1-214ENST00000469528 TOGARAM1Q9Y4F4 1720 aa17.3■□□□□ 0.36
GAPVD1-214ENST00000469528 ARHGEF1Q92888 912 aaKnown RBP17.3■□□□□ 0.36
GAPVD1-214ENST00000469528 PARP3Q9Y6F1 533 aa17.3■□□□□ 0.36
GAPVD1-214ENST00000469528 CNTNAP4Q9C0A0 1308 aa17.29■□□□□ 0.36
GAPVD1-214ENST00000469528 HSPA5P11021 654 aaKnown RBP17.29■□□□□ 0.36
GAPVD1-214ENST00000469528 ZNF526Q8TF50 670 aaPredicted RBP17.28■□□□□ 0.36
GAPVD1-214ENST00000469528 NFATC2IPQ8NCF5 419 aa17.27■□□□□ 0.36
GAPVD1-214ENST00000469528 WWC3Q9ULE0 1092 aa17.27■□□□□ 0.36
GAPVD1-214ENST00000469528 HSPA6P17066 643 aa17.26■□□□□ 0.35
GAPVD1-214ENST00000469528 SULT6B1Q6IMI4 303 aa17.26■□□□□ 0.35
GAPVD1-214ENST00000469528 BCS1LQ9Y276 419 aa17.26■□□□□ 0.35
GAPVD1-214ENST00000469528 A0A0G2JLW4 131 aa17.25■□□□□ 0.35
GAPVD1-214ENST00000469528 PTCD1O75127 700 aaKnown RBP17.25■□□□□ 0.35
GAPVD1-214ENST00000469528 GYS1P13807 737 aa17.25■□□□□ 0.35
GAPVD1-214ENST00000469528 ARHGAP27Q6ZUM4 889 aa17.25■□□□□ 0.35
GAPVD1-214ENST00000469528 SLC4A9Q96Q91 983 aa17.25■□□□□ 0.35
GAPVD1-214ENST00000469528 ADCY9O60503 1353 aa17.25■□□□□ 0.35
GAPVD1-214ENST00000469528 KDRP35968 1356 aa17.24■□□□□ 0.35
GAPVD1-214ENST00000469528 FCHSD2O94868 740 aa17.23■□□□□ 0.35
GAPVD1-214ENST00000469528 AKAP4Q5JQC9 854 aa17.23■□□□□ 0.35
GAPVD1-214ENST00000469528 ZNF831Q5JPB2 1677 aa17.23■□□□□ 0.35
GAPVD1-214ENST00000469528 CRKLP46109 303 aaKnown RBP17.22■□□□□ 0.35
GAPVD1-214ENST00000469528 CCER1Q8TC90 406 aaPredicted RBP17.22■□□□□ 0.35
GAPVD1-214ENST00000469528 PIM2Q9P1W9 311 aa17.22■□□□□ 0.35
GAPVD1-214ENST00000469528 ZPR1O75312 459 aa17.21■□□□□ 0.35
GAPVD1-214ENST00000469528 DPEP1P16444 411 aa17.21■□□□□ 0.35
GAPVD1-214ENST00000469528 IL13P35225 146 aa17.21■□□□□ 0.35
GAPVD1-214ENST00000469528 AEBP1Q8IUX7 1158 aa17.2■□□□□ 0.34
GAPVD1-214ENST00000469528 PXDNLA1KZ92 1463 aa17.19■□□□□ 0.34
GAPVD1-214ENST00000469528 KIF3CO14782 793 aa17.19■□□□□ 0.34
GAPVD1-214ENST00000469528 TOMM70O94826 608 aa17.19■□□□□ 0.34
GAPVD1-214ENST00000469528 KDM6AO15550 1401 aaPredicted RBP17.19■□□□□ 0.34
GAPVD1-214ENST00000469528 DALRD3Q5D0E6 543 aaKnown RBP17.18■□□□□ 0.34
GAPVD1-214ENST00000469528 IFFO2Q5TF58 517 aa17.18■□□□□ 0.34
GAPVD1-214ENST00000469528 SLC52A2Q9HAB3 445 aa17.18■□□□□ 0.34
GAPVD1-214ENST00000469528 CEP350Q5VT06 3117 aa17.18■□□□□ 0.34
GAPVD1-214ENST00000469528 APLP1P51693 650 aa17.17■□□□□ 0.34
GAPVD1-214ENST00000469528 C10orf71Q711Q0 1435 aa17.17■□□□□ 0.34
GAPVD1-214ENST00000469528 C16orf71Q8IYS4 520 aaPredicted RBP17.17■□□□□ 0.34
GAPVD1-214ENST00000469528 CICQ96RK0 1608 aaPredicted RBP17.17■□□□□ 0.34
GAPVD1-214ENST00000469528 USP42Q9H9J4 1324 aaKnown RBP17.17■□□□□ 0.34
GAPVD1-214ENST00000469528 KCNA3P22001 575 aa17.16■□□□□ 0.34
GAPVD1-214ENST00000469528 FKBP8Q14318 412 aa17.16■□□□□ 0.34
GAPVD1-214ENST00000469528 KIF13BQ9NQT8 1826 aa17.15■□□□□ 0.34
GAPVD1-214ENST00000469528 TM4SF1P30408 202 aa17.15■□□□□ 0.34
GAPVD1-214ENST00000469528 AMER1Q5JTC6 1135 aaPredicted RBP17.15■□□□□ 0.34
GAPVD1-214ENST00000469528 INTS5Q6P9B9 1019 aaKnown RBP17.15■□□□□ 0.34
GAPVD1-214ENST00000469528 RNMTO43148 476 aaKnown RBP17.14■□□□□ 0.33
GAPVD1-214ENST00000469528 DIAPH1O60610 1272 aaKnown RBP17.14■□□□□ 0.33
GAPVD1-214ENST00000469528 VSIG10Q8N0Z9 540 aa17.14■□□□□ 0.33
GAPVD1-214ENST00000469528 LGR6Q9HBX8 967 aa17.14■□□□□ 0.33
GAPVD1-214ENST00000469528 SRP68Q9UHB9 627 aaKnown RBP17.14■□□□□ 0.33
GAPVD1-214ENST00000469528 C4AP0C0L4 1744 aa17.13■□□□□ 0.33
GAPVD1-214ENST00000469528 C9orf131Q5VYM1 1079 aa17.13■□□□□ 0.33
GAPVD1-214ENST00000469528 USPL1Q5W0Q7 1092 aa17.13■□□□□ 0.33
GAPVD1-214ENST00000469528 DNAJC10Q8IXB1 793 aa17.13■□□□□ 0.33
GAPVD1-214ENST00000469528 KDM2BQ8NHM5 1336 aa17.13■□□□□ 0.33
GAPVD1-214ENST00000469528 COL5A3P25940 1745 aaPredicted RBP17.13■□□□□ 0.33
GAPVD1-214ENST00000469528 STARD3NLO95772 234 aa17.12■□□□□ 0.33
GAPVD1-214ENST00000469528 HMOX1P09601 288 aa17.12■□□□□ 0.33
GAPVD1-214ENST00000469528 CYP19A1P11511 503 aaPredicted RBP17.12■□□□□ 0.33
GAPVD1-214ENST00000469528 NARFQ9UHQ1 456 aa17.12■□□□□ 0.33
GAPVD1-214ENST00000469528 N4BP2Q86UW6 1770 aaPredicted RBP17.12■□□□□ 0.33
GAPVD1-214ENST00000469528 POLRMTO00411 1230 aaKnown RBP17.11■□□□□ 0.33
GAPVD1-214ENST00000469528 TTC5Q8N0Z6 440 aa17.11■□□□□ 0.33
GAPVD1-214ENST00000469528 RBM46Q8TBY0 533 aaKnown RBP17.11■□□□□ 0.33
GAPVD1-214ENST00000469528 TEX13AQ9BXU3 409 aaPredicted RBP17.11■□□□□ 0.33
GAPVD1-214ENST00000469528 MYH14Q7Z406 1995 aaKnown RBP17.11■□□□□ 0.33
GAPVD1-214ENST00000469528 A0A087WZG4 1122 aa17.1■□□□□ 0.33
GAPVD1-214ENST00000469528 DDR1Q08345 913 aa17.1■□□□□ 0.33
GAPVD1-214ENST00000469528 SLC39A6Q13433 755 aa17.1■□□□□ 0.33
GAPVD1-214ENST00000469528 MTHFSDQ2M296 383 aaKnown RBP17.1■□□□□ 0.33
GAPVD1-214ENST00000469528 NPM2Q86SE8 214 aaKnown RBP17.1■□□□□ 0.33
GAPVD1-214ENST00000469528 FSTL1Q12841 308 aa17.09■□□□□ 0.33
GAPVD1-214ENST00000469528 RNF181Q9P0P0 153 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms