RNA–Protein interactions for RNA: ENST00000469414.1

CIT-204, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-204ENST00000469414 AKAP4Q5JQC9 854 aa13.08□□□□□ -0.32
CIT-204ENST00000469414 MSL1Q68DK7 614 aa13.08□□□□□ -0.32
CIT-204ENST00000469414 NFATC2IPQ8NCF5 419 aa13.08□□□□□ -0.32
CIT-204ENST00000469414 CNKSR2Q8WXI2 1034 aa13.08□□□□□ -0.32
CIT-204ENST00000469414 PAPPAQ13219 1627 aa13.08□□□□□ -0.32
CIT-204ENST00000469414 PKD1L3Q7Z443 1732 aa13.08□□□□□ -0.32
CIT-204ENST00000469414 LINC00116Q8NCU8 138 aa13.07□□□□□ -0.32
CIT-204ENST00000469414 KDRP35968 1356 aa13.07□□□□□ -0.32
CIT-204ENST00000469414 GNPATO15228 680 aa13.06□□□□□ -0.32
CIT-204ENST00000469414 PTCD1O75127 700 aaKnown RBP13.06□□□□□ -0.32
CIT-204ENST00000469414 ITPK1Q13572 414 aa13.06□□□□□ -0.32
CIT-204ENST00000469414 SMIM5Q71RC9 77 aa13.06□□□□□ -0.32
CIT-204ENST00000469414 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.05□□□□□ -0.32
CIT-204ENST00000469414 MTHFSDQ2M296 383 aaKnown RBP13.05□□□□□ -0.32
CIT-204ENST00000469414 NUDCQ9Y266 331 aa13.05□□□□□ -0.32
CIT-204ENST00000469414 PELP1Q8IZL8 1130 aaKnown RBP13.04□□□□□ -0.32
CIT-204ENST00000469414 LGR6Q9HBX8 967 aa13.04□□□□□ -0.32
CIT-204ENST00000469414 LY75O60449 1722 aa13.04□□□□□ -0.32
CIT-204ENST00000469414 KDM6AO15550 1401 aaPredicted RBP13.04□□□□□ -0.32
CIT-204ENST00000469414 TOGARAM1Q9Y4F4 1720 aa13.03□□□□□ -0.32
CIT-204ENST00000469414 RNMTO43148 476 aaKnown RBP13.03□□□□□ -0.32
CIT-204ENST00000469414 YY1P25490 414 aa13.03□□□□□ -0.32
CIT-204ENST00000469414 SSFA2P28290 1259 aa13.03□□□□□ -0.32
CIT-204ENST00000469414 PPP2R1AP30153 589 aa13.03□□□□□ -0.32
CIT-204ENST00000469414 AMIGO3Q86WK7 504 aa13.03□□□□□ -0.32
CIT-204ENST00000469414 RTCBQ9Y3I0 505 aaKnown RBP13.03□□□□□ -0.32
CIT-204ENST00000469414 U2AF1L5P0DN76 240 aaPredicted RBP13.02□□□□□ -0.33
CIT-204ENST00000469414 U2AF1Q01081 240 aaKnown RBP eCLIP13.02□□□□□ -0.33
CIT-204ENST00000469414 GPR162Q16538 588 aa13.02□□□□□ -0.33
CIT-204ENST00000469414 TRAPPC3LQ5T215 181 aa13.02□□□□□ -0.33
CIT-204ENST00000469414 SLC4A9Q96Q91 983 aa13.02□□□□□ -0.33
CIT-204ENST00000469414 SLC52A2Q9HAB3 445 aa13.02□□□□□ -0.33
CIT-204ENST00000469414 GAS2L2Q8NHY3 880 aa13.01□□□□□ -0.33
CIT-204ENST00000469414 PRKAR2BP31323 418 aa13□□□□□ -0.33
CIT-204ENST00000469414 RC3H1Q5TC82 1133 aaKnown RBP13□□□□□ -0.33
CIT-204ENST00000469414 ITGB4P16144 1822 aa12.99□□□□□ -0.33
CIT-204ENST00000469414 GNAT3A8MTJ3 354 aa12.99□□□□□ -0.33
CIT-204ENST00000469414 RFC4P35249 363 aa12.99□□□□□ -0.33
CIT-204ENST00000469414 TEFQ10587 303 aa12.99□□□□□ -0.33
CIT-204ENST00000469414 SLC39A6Q13433 755 aa12.99□□□□□ -0.33
CIT-204ENST00000469414 NLGN2Q8NFZ4 835 aa12.99□□□□□ -0.33
CIT-204ENST00000469414 MAP3K5Q99683 1374 aa12.98□□□□□ -0.33
CIT-204ENST00000469414 RPS6KA4O75676 772 aa12.98□□□□□ -0.33
CIT-204ENST00000469414 ARHGEF1Q92888 912 aaKnown RBP12.98□□□□□ -0.33
CIT-204ENST00000469414 C4BP0C0L5 1744 aa12.98□□□□□ -0.33
CIT-204ENST00000469414 C5P01031 1676 aa12.98□□□□□ -0.33
CIT-204ENST00000469414 CNTNAP4Q9C0A0 1308 aa12.97□□□□□ -0.33
CIT-204ENST00000469414 NEFMP07197 916 aa12.97□□□□□ -0.33
CIT-204ENST00000469414 CRKLP46109 303 aaKnown RBP12.97□□□□□ -0.33
CIT-204ENST00000469414 DDX10Q13206 875 aaKnown RBP12.97□□□□□ -0.33
CIT-204ENST00000469414 DNAJC10Q8IXB1 793 aa12.97□□□□□ -0.33
CIT-204ENST00000469414 TTC5Q8N0Z6 440 aa12.97□□□□□ -0.33
CIT-204ENST00000469414 PHACTR3Q96KR7 559 aa12.97□□□□□ -0.33
CIT-204ENST00000469414 RSPH6AQ9H0K4 717 aa12.97□□□□□ -0.33
CIT-204ENST00000469414 COL3A1P02461 1466 aaPredicted RBP12.97□□□□□ -0.33
CIT-204ENST00000469414 FCHSD2O94868 740 aa12.96□□□□□ -0.33
CIT-204ENST00000469414 NLGN1Q8N2Q7 840 aa12.96□□□□□ -0.33
CIT-204ENST00000469414 IL17REQ8NFR9 667 aa12.96□□□□□ -0.33
CIT-204ENST00000469414 RTF1Q92541 710 aaKnown RBP12.96□□□□□ -0.33
CIT-204ENST00000469414 CD2APQ9Y5K6 639 aa12.96□□□□□ -0.33
CIT-204ENST00000469414 MMP10P09238 476 aa12.95□□□□□ -0.34
CIT-204ENST00000469414 QSER1Q2KHR3 1735 aa12.95□□□□□ -0.34
CIT-204ENST00000469414 CCDC87Q9NVE4 849 aa12.94□□□□□ -0.34
CIT-204ENST00000469414 TUBGCP6Q96RT7 1819 aa12.93□□□□□ -0.34
CIT-204ENST00000469414 CYP19A1P11511 503 aaPredicted RBP12.93□□□□□ -0.34
CIT-204ENST00000469414 INTS5Q6P9B9 1019 aaKnown RBP12.93□□□□□ -0.34
CIT-204ENST00000469414 PARP3Q9Y6F1 533 aa12.93□□□□□ -0.34
CIT-204ENST00000469414 BTBD11A6QL63 1104 aa12.92□□□□□ -0.34
CIT-204ENST00000469414 GRIN3BO60391 1043 aa12.92□□□□□ -0.34
CIT-204ENST00000469414 ZPR1O75312 459 aa12.92□□□□□ -0.34
CIT-204ENST00000469414 STARD3NLO95772 234 aa12.92□□□□□ -0.34
CIT-204ENST00000469414 GYS1P13807 737 aa12.92□□□□□ -0.34
CIT-204ENST00000469414 VSIG10Q8N0Z9 540 aa12.92□□□□□ -0.34
CIT-204ENST00000469414 SRP68Q9UHB9 627 aaKnown RBP12.92□□□□□ -0.34
CIT-204ENST00000469414 WWC3Q9ULE0 1092 aa12.92□□□□□ -0.34
CIT-204ENST00000469414 TAF1LQ8IZX4 1826 aa12.91□□□□□ -0.34
CIT-204ENST00000469414 CANXP27824 592 aaKnown RBP12.91□□□□□ -0.34
CIT-204ENST00000469414 RALBP1Q15311 655 aa12.91□□□□□ -0.34
CIT-204ENST00000469414 ZNF790Q6PG37 636 aa12.91□□□□□ -0.34
CIT-204ENST00000469414 MCM10Q7L590 875 aa12.91□□□□□ -0.34
CIT-204ENST00000469414 ZNF496Q96IT1 587 aaPredicted RBP12.91□□□□□ -0.34
CIT-204ENST00000469414 PNNQ9H307 717 aaKnown RBP12.91□□□□□ -0.34
CIT-204ENST00000469414 DCTN1Q14203 1278 aa12.9□□□□□ -0.34
CIT-204ENST00000469414 NPM2Q86SE8 214 aaKnown RBP12.9□□□□□ -0.34
CIT-204ENST00000469414 FMNL2Q96PY5 1086 aa12.9□□□□□ -0.34
CIT-204ENST00000469414 TEX13AQ9BXU3 409 aaPredicted RBP12.9□□□□□ -0.34
CIT-204ENST00000469414 YBX3P16989 372 aaKnown RBP eCLIP12.89□□□□□ -0.35
CIT-204ENST00000469414 FKBP8Q14318 412 aa12.89□□□□□ -0.35
CIT-204ENST00000469414 USPL1Q5W0Q7 1092 aa12.89□□□□□ -0.35
CIT-204ENST00000469414 ZBTB1Q9Y2K1 713 aa12.89□□□□□ -0.35
CIT-204ENST00000469414 ZNF330Q9Y3S2 320 aaPredicted RBP12.89□□□□□ -0.35
CIT-204ENST00000469414 MRC1P22897 1456 aa12.89□□□□□ -0.35
CIT-204ENST00000469414 SOS1Q07889 1333 aaPredicted RBP12.88□□□□□ -0.35
CIT-204ENST00000469414 USP42Q9H9J4 1324 aaKnown RBP12.88□□□□□ -0.35
CIT-204ENST00000469414 MAPK8IP3Q9UPT6 1336 aa12.88□□□□□ -0.35
CIT-204ENST00000469414 KCNQ3O43525 872 aa12.88□□□□□ -0.35
CIT-204ENST00000469414 HTATSF1O43719 755 aaKnown RBP12.88□□□□□ -0.35
CIT-204ENST00000469414 UBR3Q6ZT12 1888 aa12.88□□□□□ -0.35
CIT-204ENST00000469414 SCN11AQ9UI33 1791 aa12.87□□□□□ -0.35
CIT-204ENST00000469414 CEMIPQ8WUJ3 1361 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms