RNA–Protein interactions for RNA: ENST00000469217.5

PCCB-209, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PCCB, Length 1,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-209ENST00000469217 MIS18AQ9NYP9 233 aa22.68■■□□□ 1.22
PCCB-209ENST00000469217 SIPA1L3O60292 1781 aaPredicted RBP22.68■■□□□ 1.22
PCCB-209ENST00000469217 ACSBG1Q96GR2 724 aa22.68■■□□□ 1.22
PCCB-209ENST00000469217 E9PSI1 815 aa22.67■■□□□ 1.22
PCCB-209ENST00000469217 PRIM1P49642 420 aaKnown RBP22.67■■□□□ 1.22
PCCB-209ENST00000469217 GNAI1P63096 354 aa22.67■■□□□ 1.22
PCCB-209ENST00000469217 BCL9O00512 1426 aa22.67■■□□□ 1.22
PCCB-209ENST00000469217 CHL1O00533 1208 aa22.66■■□□□ 1.22
PCCB-209ENST00000469217 SYTL4Q96C24 671 aaPredicted RBP22.66■■□□□ 1.22
PCCB-209ENST00000469217 TSR2Q969E8 191 aaKnown RBP22.66■■□□□ 1.22
PCCB-209ENST00000469217 ITGB4P16144 1822 aa22.65■■□□□ 1.22
PCCB-209ENST00000469217 BTBD11A6QL63 1104 aa22.65■■□□□ 1.22
PCCB-209ENST00000469217 TRMT2AQ8IZ69 625 aaKnown RBP22.65■■□□□ 1.22
PCCB-209ENST00000469217 MBIPQ9NS73 344 aa22.65■■□□□ 1.22
PCCB-209ENST00000469217 TMOD3Q9NYL9 352 aa22.65■■□□□ 1.22
PCCB-209ENST00000469217 KAT6BQ8WYB5 2073 aa22.65■■□□□ 1.22
PCCB-209ENST00000469217 KCNQ2O43526 872 aa22.64■■□□□ 1.22
PCCB-209ENST00000469217 CENPBP07199 599 aaPredicted RBP22.64■■□□□ 1.22
PCCB-209ENST00000469217 TSPYL4Q9UJ04 414 aa22.64■■□□□ 1.22
PCCB-209ENST00000469217 PIGBQ92521 554 aa22.64■■□□□ 1.21
PCCB-209ENST00000469217 MYH16Q9H6N6 1097 aa22.64■■□□□ 1.21
PCCB-209ENST00000469217 FANCIQ9NVI1 1328 aa22.64■■□□□ 1.21
PCCB-209ENST00000469217 EP400Q96L91 3159 aa22.63■■□□□ 1.21
PCCB-209ENST00000469217 DUSP27Q5VZP5 1158 aa22.63■■□□□ 1.21
PCCB-209ENST00000469217 FAM196AQ6ZSG2 479 aa22.63■■□□□ 1.21
PCCB-209ENST00000469217 BABAM1Q9NWV8 329 aa22.63■■□□□ 1.21
PCCB-209ENST00000469217 KCNQ3O43525 872 aa22.61■■□□□ 1.21
PCCB-209ENST00000469217 SLC39A6Q13433 755 aa22.61■■□□□ 1.21
PCCB-209ENST00000469217 PTF1AQ7RTS3 328 aa22.6■■□□□ 1.21
PCCB-209ENST00000469217 SBF2Q86WG5 1849 aa22.6■■□□□ 1.21
PCCB-209ENST00000469217 KDM3BQ7LBC6 1761 aa22.6■■□□□ 1.21
PCCB-209ENST00000469217 ZNF790Q6PG37 636 aa22.59■■□□□ 1.21
PCCB-209ENST00000469217 NHSQ6T4R5 1651 aa22.59■■□□□ 1.21
PCCB-209ENST00000469217 ASAP1Q9ULH1 1129 aa22.57■■□□□ 1.2
PCCB-209ENST00000469217 ATG3Q9NT62 314 aa22.57■■□□□ 1.2
PCCB-209ENST00000469217 EXOSC9Q06265 439 aaKnown RBP22.56■■□□□ 1.2
PCCB-209ENST00000469217 TTC5Q8N0Z6 440 aa22.56■■□□□ 1.2
PCCB-209ENST00000469217 PAPPAQ13219 1627 aa22.56■■□□□ 1.2
PCCB-209ENST00000469217 EIF4A1P60842 406 aaKnown RBP22.55■■□□□ 1.2
PCCB-209ENST00000469217 KRT24Q2M2I5 525 aa22.55■■□□□ 1.2
PCCB-209ENST00000469217 TRIM37O94972 964 aa22.54■■□□□ 1.2
PCCB-209ENST00000469217 BCL11BQ9C0K0 894 aaPredicted RBP22.54■■□□□ 1.2
PCCB-209ENST00000469217 C8orf58Q8NAV2 365 aa22.53■■□□□ 1.2
PCCB-209ENST00000469217 ZNF496Q96IT1 587 aaPredicted RBP22.53■■□□□ 1.2
PCCB-209ENST00000469217 BTAF1O14981 1849 aa22.53■■□□□ 1.2
PCCB-209ENST00000469217 TSPYL6Q8N831 410 aa22.52■■□□□ 1.2
PCCB-209ENST00000469217 UBR2Q8IWV8 1755 aa22.52■■□□□ 1.2
PCCB-209ENST00000469217 ELL2O00472 640 aaPredicted RBP22.52■■□□□ 1.2
PCCB-209ENST00000469217 KCPQ6ZWJ8 1503 aa22.51■■□□□ 1.19
PCCB-209ENST00000469217 PTCD1O75127 700 aaKnown RBP22.51■■□□□ 1.19
PCCB-209ENST00000469217 HEG1Q9ULI3 1381 aa22.51■■□□□ 1.19
PCCB-209ENST00000469217 FMNL2Q96PY5 1086 aa22.5■■□□□ 1.19
PCCB-209ENST00000469217 TWISTNBQ3B726 338 aaPredicted RBP22.49■■□□□ 1.19
PCCB-209ENST00000469217 PALLDQ8WX93 1383 aa22.49■■□□□ 1.19
PCCB-209ENST00000469217 PRAMEF22A3QJZ6 481 aa22.47■■□□□ 1.19
PCCB-209ENST00000469217 GIGYF1O75420 1035 aaPredicted RBP22.47■■□□□ 1.19
PCCB-209ENST00000469217 SMARCC1Q92922 1105 aaPredicted RBP22.47■■□□□ 1.19
PCCB-209ENST00000469217 RBM42Q9BTD8 480 aaKnown RBP22.47■■□□□ 1.19
PCCB-209ENST00000469217 VAMP4O75379 141 aa22.47■■□□□ 1.19
PCCB-209ENST00000469217 SLC4A9Q96Q91 983 aa22.45■■□□□ 1.19
PCCB-209ENST00000469217 SNRPA1P09661 255 aaKnown RBP22.45■■□□□ 1.18
PCCB-209ENST00000469217 LOC102724428A0A0B4J2F2 783 aa22.44■■□□□ 1.18
PCCB-209ENST00000469217 SIK1P57059 783 aa22.44■■□□□ 1.18
PCCB-209ENST00000469217 VSIG10Q8N0Z9 540 aa22.44■■□□□ 1.18
PCCB-209ENST00000469217 HOXB7P09629 217 aa22.43■■□□□ 1.18
PCCB-209ENST00000469217 CT47B1P0C2W7 299 aaPredicted RBP22.43■■□□□ 1.18
PCCB-209ENST00000469217 C5P01031 1676 aa22.43■■□□□ 1.18
PCCB-209ENST00000469217 USP16Q9Y5T5 823 aa22.43■■□□□ 1.18
PCCB-209ENST00000469217 TNS1Q9HBL0 1735 aaKnown RBP22.42■■□□□ 1.18
PCCB-209ENST00000469217 SOS1Q07889 1333 aaPredicted RBP22.42■■□□□ 1.18
PCCB-209ENST00000469217 APBA3O96018 575 aa22.42■■□□□ 1.18
PCCB-209ENST00000469217 LY75O60449 1722 aa22.41■■□□□ 1.18
PCCB-209ENST00000469217 EIF2S2P20042 333 aaKnown RBP22.41■■□□□ 1.18
PCCB-209ENST00000469217 ATP6V1AP38606 617 aa22.41■■□□□ 1.18
PCCB-209ENST00000469217 DNAJC10Q8IXB1 793 aa22.4■■□□□ 1.18
PCCB-209ENST00000469217 NECTIN2Q92692 538 aa22.4■■□□□ 1.18
PCCB-209ENST00000469217 KCNQ4P56696 695 aa22.39■■□□□ 1.17
PCCB-209ENST00000469217 HDGFL1Q5TGJ6 251 aa22.39■■□□□ 1.17
PCCB-209ENST00000469217 RCAN3Q9UKA8 241 aa22.39■■□□□ 1.17
PCCB-209ENST00000469217 TCERG1O14776 1098 aaKnown RBP22.38■■□□□ 1.17
PCCB-209ENST00000469217 PLSCR1O15162 318 aa22.38■■□□□ 1.17
PCCB-209ENST00000469217 RARSP54136 660 aaKnown RBP22.38■■□□□ 1.17
PCCB-209ENST00000469217 ZNF428Q96B54 188 aa22.38■■□□□ 1.17
PCCB-209ENST00000469217 TJP1Q07157 1748 aa22.38■■□□□ 1.17
PCCB-209ENST00000469217 ITPK1Q13572 414 aa22.38■■□□□ 1.17
PCCB-209ENST00000469217 TEX13AQ9BXU3 409 aaPredicted RBP22.38■■□□□ 1.17
PCCB-209ENST00000469217 ZNF831Q5JPB2 1677 aa22.37■■□□□ 1.17
PCCB-209ENST00000469217 CCNL1Q9UK58 526 aaPredicted RBP22.37■■□□□ 1.17
PCCB-209ENST00000469217 LAMB4A4D0S4 1761 aa22.37■■□□□ 1.17
PCCB-209ENST00000469217 CCDC30Q5VVM6 783 aa22.36■■□□□ 1.17
PCCB-209ENST00000469217 SSH1Q8WYL5 1049 aa22.36■■□□□ 1.17
PCCB-209ENST00000469217 BCL2L13Q9BXK5 485 aa22.36■■□□□ 1.17
PCCB-209ENST00000469217 CICQ96RK0 1608 aaPredicted RBP22.35■■□□□ 1.17
PCCB-209ENST00000469217 ALDH1L2Q3SY69 923 aa22.35■■□□□ 1.17
PCCB-209ENST00000469217 PROM2Q8N271 834 aa22.35■■□□□ 1.17
PCCB-209ENST00000469217 BCAR3O75815 825 aa22.34■■□□□ 1.17
PCCB-209ENST00000469217 STARD3NLO95772 234 aa22.34■■□□□ 1.17
PCCB-209ENST00000469217 CYP19A1P11511 503 aaPredicted RBP22.34■■□□□ 1.17
PCCB-209ENST00000469217 LRRC4BQ9NT99 713 aa22.34■■□□□ 1.17
PCCB-209ENST00000469217 SF3B2Q13435 895 aaKnown RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms