RNA–Protein interactions for RNA: ENST00000469065.1

SEMA4A-211, Transcript of semaphorin 4A, humanhuman

TSL 3

Gene SEMA4A, Length 608 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4A-211ENST00000469065 RFC4P35249 363 aa15.21■□□□□ 0.03
SEMA4A-211ENST00000469065 LTV1Q96GA3 475 aaPredicted RBP15.21■□□□□ 0.03
SEMA4A-211ENST00000469065 FAM208AQ9UK61 1670 aaKnown RBP15.21■□□□□ 0.03
SEMA4A-211ENST00000469065 IQCA1LA6NCM1 817 aa15.2■□□□□ 0.02
SEMA4A-211ENST00000469065 DEFB115Q30KQ5 88 aa15.2■□□□□ 0.02
SEMA4A-211ENST00000469065 PDE4DIPQ5VU43 2346 aa15.2■□□□□ 0.02
SEMA4A-211ENST00000469065 TAF1LQ8IZX4 1826 aa15.2■□□□□ 0.02
SEMA4A-211ENST00000469065 LOC102724428A0A0B4J2F2 783 aa15.19■□□□□ 0.02
SEMA4A-211ENST00000469065 TATP17735 454 aaPredicted RBP15.19■□□□□ 0.02
SEMA4A-211ENST00000469065 KCNA3P22001 575 aa15.19■□□□□ 0.02
SEMA4A-211ENST00000469065 SIK1P57059 783 aa15.19■□□□□ 0.02
SEMA4A-211ENST00000469065 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.18■□□□□ 0.02
SEMA4A-211ENST00000469065 UBR3Q6ZT12 1888 aa15.18■□□□□ 0.02
SEMA4A-211ENST00000469065 CA12O43570 354 aa15.17■□□□□ 0.02
SEMA4A-211ENST00000469065 ECE1P42892 770 aa15.17■□□□□ 0.02
SEMA4A-211ENST00000469065 LDHDQ86WU2 507 aa15.17■□□□□ 0.02
SEMA4A-211ENST00000469065 PIAS4Q8N2W9 510 aaPredicted RBP15.17■□□□□ 0.02
SEMA4A-211ENST00000469065 ATP6V1AP38606 617 aa15.16■□□□□ 0.02
SEMA4A-211ENST00000469065 AMPHP49418 695 aa15.16■□□□□ 0.02
SEMA4A-211ENST00000469065 SMIM5Q71RC9 77 aa15.15■□□□□ 0.02
SEMA4A-211ENST00000469065 HDGFL2Q7Z4V5 671 aaPredicted RBP15.15■□□□□ 0.02
SEMA4A-211ENST00000469065 PPARGC1BQ86YN6 1023 aaKnown RBP15.15■□□□□ 0.02
SEMA4A-211ENST00000469065 RASSF10A6NK89 507 aa15.14■□□□□ 0.01
SEMA4A-211ENST00000469065 AMIGO3Q86WK7 504 aa15.14■□□□□ 0.01
SEMA4A-211ENST00000469065 LINC00116Q8NCU8 138 aa15.14■□□□□ 0.01
SEMA4A-211ENST00000469065 KDM6AO15550 1401 aaPredicted RBP15.14■□□□□ 0.01
SEMA4A-211ENST00000469065 WDR33Q9C0J8 1336 aaKnown RBP15.14■□□□□ 0.01
SEMA4A-211ENST00000469065 SBF1O95248 1867 aa15.13■□□□□ 0.01
SEMA4A-211ENST00000469065 SMG6Q86US8 1419 aaKnown RBP15.13■□□□□ 0.01
SEMA4A-211ENST00000469065 LTN1O94822 1766 aa15.13■□□□□ 0.01
SEMA4A-211ENST00000469065 PASKQ96RG2 1323 aa15.13■□□□□ 0.01
SEMA4A-211ENST00000469065 BRCA1P38398 1863 aaKnown RBP15.12■□□□□ 0.01
SEMA4A-211ENST00000469065 RC3H1Q5TC82 1133 aaKnown RBP15.12■□□□□ 0.01
SEMA4A-211ENST00000469065 TMOD3Q9NYL9 352 aa15.12■□□□□ 0.01
SEMA4A-211ENST00000469065 KIAA1551Q9HCM1 1747 aa15.12■□□□□ 0.01
SEMA4A-211ENST00000469065 GYS1P13807 737 aa15.11■□□□□ 0.01
SEMA4A-211ENST00000469065 RASSF7Q02833 373 aa15.11■□□□□ 0.01
SEMA4A-211ENST00000469065 ERFEQ4G0M1 354 aa15.11■□□□□ 0.01
SEMA4A-211ENST00000469065 TTLL6Q8N841 843 aa15.11■□□□□ 0.01
SEMA4A-211ENST00000469065 ABT1Q9ULW3 272 aaKnown RBP15.11■□□□□ 0.01
SEMA4A-211ENST00000469065 CD163L1Q9NR16 1453 aa15.11■□□□□ 0.01
SEMA4A-211ENST00000469065 C4AP0C0L4 1744 aa15.11■□□□□ 0.01
SEMA4A-211ENST00000469065 PIGBQ92521 554 aa15.1■□□□□ 0.01
SEMA4A-211ENST00000469065 ARHGEF1Q92888 912 aaKnown RBP15.1■□□□□ 0.01
SEMA4A-211ENST00000469065 MCOLN1Q9GZU1 580 aa15.1■□□□□ 0.01
SEMA4A-211ENST00000469065 MAP3K19Q56UN5 1328 aa15.1■□□□□ 0.01
SEMA4A-211ENST00000469065 POTECB2RU33 542 aa15.09■□□□□ 0.01
SEMA4A-211ENST00000469065 NME9Q86XW9 330 aa15.09■□□□□ 0.01
SEMA4A-211ENST00000469065 NBPF15Q8N660 670 aa15.08■□□□□ 0
SEMA4A-211ENST00000469065 TERF2IPQ9NYB0 399 aa15.08■□□□□ 0
SEMA4A-211ENST00000469065 CLEC11AQ9Y240 323 aa15.08■□□□□ 0
SEMA4A-211ENST00000469065 TOGARAM1Q9Y4F4 1720 aa15.07■□□□□ 0
SEMA4A-211ENST00000469065 RPS6KA4O75676 772 aa15.07■□□□□ 0
SEMA4A-211ENST00000469065 CHRNA5P30532 468 aa15.07■□□□□ 0
SEMA4A-211ENST00000469065 HOXC9P31274 260 aa15.07■□□□□ 0
SEMA4A-211ENST00000469065 DGKZQ13574 1117 aa15.07■□□□□ 0
SEMA4A-211ENST00000469065 NBPF1Q3BBV0 1214 aa15.07■□□□□ 0
SEMA4A-211ENST00000469065 PAXIP1Q6ZW49 1069 aaPredicted RBP15.07■□□□□ 0
SEMA4A-211ENST00000469065 PNMA8AQ86V59 439 aaPredicted RBP15.07■□□□□ 0
SEMA4A-211ENST00000469065 PDZRN3Q9UPQ7 1066 aa15.07■□□□□ 0
SEMA4A-211ENST00000469065 MEGF6O75095 1541 aa15.07■□□□□ 0
SEMA4A-211ENST00000469065 VIRMAQ69YN4 1812 aaKnown RBP15.06■□□□□ 0
SEMA4A-211ENST00000469065 MAP2K2P36507 400 aa15.06■□□□□ 0
SEMA4A-211ENST00000469065 COG3Q96JB2 828 aa15.06■□□□□ 0
SEMA4A-211ENST00000469065 GPR101Q96P66 508 aaPredicted RBP15.06■□□□□ 0
SEMA4A-211ENST00000469065 ZNF219Q9P2Y4 722 aaPredicted RBP15.06■□□□□ 0
SEMA4A-211ENST00000469065 SPG7Q9UQ90 795 aa15.06■□□□□ 0
SEMA4A-211ENST00000469065 H0YIN7 160 aa15.04■□□□□ -0
SEMA4A-211ENST00000469065 EDC4Q6P2E9 1401 aaKnown RBP15.03■□□□□ -0
SEMA4A-211ENST00000469065 RTL1A6NKG5 1358 aa15.03■□□□□ -0
SEMA4A-211ENST00000469065 CNTNAP4Q9C0A0 1308 aa15.03■□□□□ -0
SEMA4A-211ENST00000469065 ITGBL1O95965 494 aaPredicted RBP15.03■□□□□ -0
SEMA4A-211ENST00000469065 ITPK1Q13572 414 aa15.03■□□□□ -0
SEMA4A-211ENST00000469065 NKX1-1Q15270 411 aaPredicted RBP15.03■□□□□ -0
SEMA4A-211ENST00000469065 NBPF6Q5VWK0 638 aa15.03■□□□□ -0
SEMA4A-211ENST00000469065 CAPNS2Q96L46 248 aa15.03■□□□□ -0
SEMA4A-211ENST00000469065 NBPF4Q96M43 638 aa15.03■□□□□ -0
SEMA4A-211ENST00000469065 ZPR1O75312 459 aa15.02■□□□□ -0
SEMA4A-211ENST00000469065 EAPPQ56P03 285 aaPredicted RBP15.02■□□□□ -0
SEMA4A-211ENST00000469065 SOGA3Q5TF21 947 aa15.02■□□□□ -0
SEMA4A-211ENST00000469065 TMC1Q8TDI8 760 aa15.02■□□□□ -0
SEMA4A-211ENST00000469065 TNRC18O15417 2968 aaPredicted RBP15.01□□□□□ -0.01
SEMA4A-211ENST00000469065 CNTROBQ8N137 903 aa15.01□□□□□ -0.01
SEMA4A-211ENST00000469065 TAF1DQ9H5J8 278 aaPredicted RBP15.01□□□□□ -0.01
SEMA4A-211ENST00000469065 CYP27B1O15528 508 aa15□□□□□ -0.01
SEMA4A-211ENST00000469065 DDNO94850 711 aaPredicted RBP15□□□□□ -0.01
SEMA4A-211ENST00000469065 L3MBTL3Q96JM7 780 aaPredicted RBP15□□□□□ -0.01
SEMA4A-211ENST00000469065 RBM42Q9BTD8 480 aaKnown RBP15□□□□□ -0.01
SEMA4A-211ENST00000469065 HACL1Q9UJ83 578 aa15□□□□□ -0.01
SEMA4A-211ENST00000469065 ASAP1Q9ULH1 1129 aa15□□□□□ -0.01
SEMA4A-211ENST00000469065 SBNO2Q9Y2G9 1366 aa14.99□□□□□ -0.01
SEMA4A-211ENST00000469065 TIAM2Q8IVF5 1701 aa14.99□□□□□ -0.01
SEMA4A-211ENST00000469065 LTBP3Q9NS15 1303 aa14.98□□□□□ -0.01
SEMA4A-211ENST00000469065 POTEIP0CG38 1075 aa14.98□□□□□ -0.01
SEMA4A-211ENST00000469065 POTEJP0CG39 1038 aa14.98□□□□□ -0.01
SEMA4A-211ENST00000469065 TAOK3Q9H2K8 898 aa14.98□□□□□ -0.01
SEMA4A-211ENST00000469065 MON2Q7Z3U7 1717 aa14.97□□□□□ -0.01
SEMA4A-211ENST00000469065 NFKBIEO00221 500 aa14.97□□□□□ -0.01
SEMA4A-211ENST00000469065 GRM1Q13255 1194 aa14.97□□□□□ -0.01
SEMA4A-211ENST00000469065 C2CD5Q86YS7 1000 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms