RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 HEG1Q9ULI3 1381 aa14.74□□□□□ -0.05
MSH5-214ENST00000468602 GNAI1P63096 354 aa14.74□□□□□ -0.05
MSH5-214ENST00000468602 HNRNPUQ00839 825 aaKnown RBP eCLIP14.74□□□□□ -0.05
MSH5-214ENST00000468602 UBR2Q8IWV8 1755 aa14.74□□□□□ -0.05
MSH5-214ENST00000468602 RGPD3A6NKT7 1758 aaPredicted RBP14.73□□□□□ -0.05
MSH5-214ENST00000468602 RGPD4Q7Z3J3 1758 aa14.73□□□□□ -0.05
MSH5-214ENST00000468602 SOS1Q07889 1333 aaPredicted RBP14.73□□□□□ -0.05
MSH5-214ENST00000468602 A0A0G2JS52 829 aa14.73□□□□□ -0.05
MSH5-214ENST00000468602 MYT1Q01538 1121 aa14.73□□□□□ -0.05
MSH5-214ENST00000468602 GOLGA2Q08379 1002 aa14.73□□□□□ -0.05
MSH5-214ENST00000468602 TEFQ10587 303 aa14.73□□□□□ -0.05
MSH5-214ENST00000468602 NEUROD2Q15784 382 aa14.73□□□□□ -0.05
MSH5-214ENST00000468602 E9PSI1 815 aa14.72□□□□□ -0.05
MSH5-214ENST00000468602 CABP4P57796 275 aa14.72□□□□□ -0.05
MSH5-214ENST00000468602 DCTN1Q14203 1278 aa14.72□□□□□ -0.05
MSH5-214ENST00000468602 NFATC2IPQ8NCF5 419 aa14.72□□□□□ -0.05
MSH5-214ENST00000468602 PIGBQ92521 554 aa14.72□□□□□ -0.05
MSH5-214ENST00000468602 PRIM1P49642 420 aaKnown RBP14.71□□□□□ -0.05
MSH5-214ENST00000468602 SLFN5Q08AF3 891 aa14.71□□□□□ -0.05
MSH5-214ENST00000468602 CCDC125Q86Z20 511 aa14.71□□□□□ -0.05
MSH5-214ENST00000468602 TMOD3Q9NYL9 352 aa14.71□□□□□ -0.05
MSH5-214ENST00000468602 PLSCR1O15162 318 aa14.7□□□□□ -0.06
MSH5-214ENST00000468602 ZNF790Q6PG37 636 aa14.7□□□□□ -0.06
MSH5-214ENST00000468602 VSIG10Q8N0Z9 540 aa14.7□□□□□ -0.06
MSH5-214ENST00000468602 SMARCC1Q92922 1105 aaPredicted RBP14.7□□□□□ -0.06
MSH5-214ENST00000468602 MYH16Q9H6N6 1097 aa14.7□□□□□ -0.06
MSH5-214ENST00000468602 BTAF1O14981 1849 aa14.7□□□□□ -0.06
MSH5-214ENST00000468602 TNS1Q9HBL0 1735 aaKnown RBP14.69□□□□□ -0.06
MSH5-214ENST00000468602 KAT6BQ8WYB5 2073 aa14.69□□□□□ -0.06
MSH5-214ENST00000468602 HOXB7P09629 217 aa14.69□□□□□ -0.06
MSH5-214ENST00000468602 HMGB2P26583 209 aaKnown RBP14.69□□□□□ -0.06
MSH5-214ENST00000468602 THUMPD2Q9BTF0 503 aaKnown RBP14.69□□□□□ -0.06
MSH5-214ENST00000468602 KCPQ6ZWJ8 1503 aa14.69□□□□□ -0.06
MSH5-214ENST00000468602 LY75O60449 1722 aa14.69□□□□□ -0.06
MSH5-214ENST00000468602 BTBD11A6QL63 1104 aa14.68□□□□□ -0.06
MSH5-214ENST00000468602 KCNQ2O43526 872 aa14.68□□□□□ -0.06
MSH5-214ENST00000468602 CT47B1P0C2W7 299 aaPredicted RBP14.68□□□□□ -0.06
MSH5-214ENST00000468602 SPINK5Q9NQ38 1064 aaPredicted RBP14.68□□□□□ -0.06
MSH5-214ENST00000468602 ATG3Q9NT62 314 aa14.68□□□□□ -0.06
MSH5-214ENST00000468602 DUSP27Q5VZP5 1158 aa14.67□□□□□ -0.06
MSH5-214ENST00000468602 MBIPQ9NS73 344 aa14.67□□□□□ -0.06
MSH5-214ENST00000468602 EP400Q96L91 3159 aa14.67□□□□□ -0.06
MSH5-214ENST00000468602 EIF4A1P60842 406 aaKnown RBP14.66□□□□□ -0.06
MSH5-214ENST00000468602 FANCIQ9NVI1 1328 aa14.66□□□□□ -0.06
MSH5-214ENST00000468602 FAM182BQ5T319 152 aa14.65□□□□□ -0.06
MSH5-214ENST00000468602 ZNF428Q96B54 188 aa14.65□□□□□ -0.06
MSH5-214ENST00000468602 ACSBG1Q96GR2 724 aa14.65□□□□□ -0.06
MSH5-214ENST00000468602 CHMP4AQ9BY43 222 aa14.65□□□□□ -0.06
MSH5-214ENST00000468602 TSPYL4Q9UJ04 414 aa14.65□□□□□ -0.06
MSH5-214ENST00000468602 TEX13AQ9BXU3 409 aaPredicted RBP14.64□□□□□ -0.07
MSH5-214ENST00000468602 ASAP1Q9ULH1 1129 aa14.64□□□□□ -0.07
MSH5-214ENST00000468602 PALLDQ8WX93 1383 aa14.63□□□□□ -0.07
MSH5-214ENST00000468602 TRIM37O94972 964 aa14.63□□□□□ -0.07
MSH5-214ENST00000468602 SLC27A3Q5K4L6 730 aa14.63□□□□□ -0.07
MSH5-214ENST00000468602 PTF1AQ7RTS3 328 aa14.63□□□□□ -0.07
MSH5-214ENST00000468602 TTC5Q8N0Z6 440 aa14.63□□□□□ -0.07
MSH5-214ENST00000468602 ZNF496Q96IT1 587 aaPredicted RBP14.63□□□□□ -0.07
MSH5-214ENST00000468602 FMNL2Q96PY5 1086 aa14.63□□□□□ -0.07
MSH5-214ENST00000468602 SALL2Q9Y467 1007 aaPredicted RBP14.63□□□□□ -0.07
MSH5-214ENST00000468602 GIGYF1O75420 1035 aaPredicted RBP14.62□□□□□ -0.07
MSH5-214ENST00000468602 IFFO2Q5TF58 517 aa14.62□□□□□ -0.07
MSH5-214ENST00000468602 CDCA7LQ96GN5 454 aa14.62□□□□□ -0.07
MSH5-214ENST00000468602 C5P01031 1676 aa14.61□□□□□ -0.07
MSH5-214ENST00000468602 LAMB4A4D0S4 1761 aa14.61□□□□□ -0.07
MSH5-214ENST00000468602 LOC102724428A0A0B4J2F2 783 aa14.61□□□□□ -0.07
MSH5-214ENST00000468602 KCNQ3O43525 872 aa14.61□□□□□ -0.07
MSH5-214ENST00000468602 SNRPA1P09661 255 aaKnown RBP14.61□□□□□ -0.07
MSH5-214ENST00000468602 SIK1P57059 783 aa14.61□□□□□ -0.07
MSH5-214ENST00000468602 SLC39A6Q13433 755 aa14.61□□□□□ -0.07
MSH5-214ENST00000468602 SYTL4Q96C24 671 aaPredicted RBP14.61□□□□□ -0.07
MSH5-214ENST00000468602 SLC4A9Q96Q91 983 aa14.61□□□□□ -0.07
MSH5-214ENST00000468602 CACNA1FO60840 1977 aa14.61□□□□□ -0.07
MSH5-214ENST00000468602 RREB1Q92766 1687 aa14.61□□□□□ -0.07
MSH5-214ENST00000468602 ERBB4Q15303 1308 aa14.61□□□□□ -0.07
MSH5-214ENST00000468602 BRPF1P55201 1214 aaPredicted RBP14.6□□□□□ -0.07
MSH5-214ENST00000468602 CAMKK2Q96RR4 588 aa14.6□□□□□ -0.07
MSH5-214ENST00000468602 MIS18AQ9NYP9 233 aa14.6□□□□□ -0.07
MSH5-214ENST00000468602 COL5A3P25940 1745 aaPredicted RBP14.6□□□□□ -0.07
MSH5-214ENST00000468602 TJP1Q07157 1748 aa14.6□□□□□ -0.07
MSH5-214ENST00000468602 TAF1LQ8IZX4 1826 aa14.59□□□□□ -0.07
MSH5-214ENST00000468602 VAMP4O75379 141 aa14.59□□□□□ -0.07
MSH5-214ENST00000468602 RC3H1Q5TC82 1133 aaKnown RBP14.59□□□□□ -0.07
MSH5-214ENST00000468602 TSR2Q969E8 191 aaKnown RBP14.59□□□□□ -0.07
MSH5-214ENST00000468602 PROM2Q8N271 834 aa14.58□□□□□ -0.08
MSH5-214ENST00000468602 SENP3-EIF4A1A0A087X0R7 540 aa14.57□□□□□ -0.08
MSH5-214ENST00000468602 APBA3O96018 575 aa14.57□□□□□ -0.08
MSH5-214ENST00000468602 EXOSC9Q06265 439 aaKnown RBP14.57□□□□□ -0.08
MSH5-214ENST00000468602 C8orf58Q8NAV2 365 aa14.57□□□□□ -0.08
MSH5-214ENST00000468602 CNTNAP4Q9C0A0 1308 aa14.57□□□□□ -0.08
MSH5-214ENST00000468602 CYP19A1P11511 503 aaPredicted RBP14.56□□□□□ -0.08
MSH5-214ENST00000468602 BAG6P46379 1132 aa14.56□□□□□ -0.08
MSH5-214ENST00000468602 TWISTNBQ3B726 338 aaPredicted RBP14.56□□□□□ -0.08
MSH5-214ENST00000468602 ALDH1L2Q3SY69 923 aa14.56□□□□□ -0.08
MSH5-214ENST00000468602 LAS1LQ9Y4W2 734 aaKnown RBP14.56□□□□□ -0.08
MSH5-214ENST00000468602 RGL2O15211 777 aa14.55□□□□□ -0.08
MSH5-214ENST00000468602 STARD3NLO95772 234 aa14.55□□□□□ -0.08
MSH5-214ENST00000468602 ITPK1Q13572 414 aa14.55□□□□□ -0.08
MSH5-214ENST00000468602 TXNRD1Q16881 649 aa14.55□□□□□ -0.08
MSH5-214ENST00000468602 TSPYL6Q8N831 410 aa14.55□□□□□ -0.08
MSH5-214ENST00000468602 PTCD1O75127 700 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms