RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 WBP1LQ9NX94 342 aa17.02■□□□□ 0.32
VPS26A-204ENST00000467852 CFAP44Q96MT7 982 aa17.01■□□□□ 0.31
VPS26A-204ENST00000467852 SMARCC1Q92922 1105 aaPredicted RBP17■□□□□ 0.31
VPS26A-204ENST00000467852 CENPJQ9HC77 1338 aaPredicted RBP16.99■□□□□ 0.31
VPS26A-204ENST00000467852 HSPA8P11142 646 aaKnown RBP16.99■□□□□ 0.31
VPS26A-204ENST00000467852 NLGN1Q8N2Q7 840 aa16.99■□□□□ 0.31
VPS26A-204ENST00000467852 TNRC18O15417 2968 aaPredicted RBP16.98■□□□□ 0.31
VPS26A-204ENST00000467852 FAM208AQ9UK61 1670 aaKnown RBP16.98■□□□□ 0.31
VPS26A-204ENST00000467852 KCNA3P22001 575 aa16.98■□□□□ 0.31
VPS26A-204ENST00000467852 VEGFBP49765 207 aa16.98■□□□□ 0.31
VPS26A-204ENST00000467852 LTV1Q96GA3 475 aaPredicted RBP16.98■□□□□ 0.31
VPS26A-204ENST00000467852 TMF1P82094 1093 aa16.97■□□□□ 0.31
VPS26A-204ENST00000467852 MPRIPQ6WCQ1 1025 aa16.97■□□□□ 0.31
VPS26A-204ENST00000467852 VIRMAQ69YN4 1812 aaKnown RBP16.96■□□□□ 0.31
VPS26A-204ENST00000467852 GNPATO15228 680 aa16.96■□□□□ 0.31
VPS26A-204ENST00000467852 CHADLQ6NUI6 762 aa16.96■□□□□ 0.31
VPS26A-204ENST00000467852 PARP3Q9Y6F1 533 aa16.96■□□□□ 0.31
VPS26A-204ENST00000467852 KTN1Q86UP2 1357 aaKnown RBP16.94■□□□□ 0.3
VPS26A-204ENST00000467852 MAP2K1Q02750 393 aaPredicted RBP16.94■□□□□ 0.3
VPS26A-204ENST00000467852 USP31Q70CQ4 1352 aa16.93■□□□□ 0.3
VPS26A-204ENST00000467852 LMNB1P20700 586 aa16.93■□□□□ 0.3
VPS26A-204ENST00000467852 DPY19L2Q6NUT2 758 aa16.93■□□□□ 0.3
VPS26A-204ENST00000467852 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.93■□□□□ 0.3
VPS26A-204ENST00000467852 IP6K1Q92551 441 aa16.93■□□□□ 0.3
VPS26A-204ENST00000467852 POTECB2RU33 542 aa16.92■□□□□ 0.3
VPS26A-204ENST00000467852 LINC00116Q8NCU8 138 aa16.92■□□□□ 0.3
VPS26A-204ENST00000467852 C4AP0C0L4 1744 aa16.92■□□□□ 0.3
VPS26A-204ENST00000467852 CCDC88AQ3V6T2 1871 aa16.92■□□□□ 0.3
VPS26A-204ENST00000467852 EVC2Q86UK5 1308 aa16.92■□□□□ 0.3
VPS26A-204ENST00000467852 RASSF7Q02833 373 aa16.91■□□□□ 0.3
VPS26A-204ENST00000467852 TRAPPC3LQ5T215 181 aa16.91■□□□□ 0.3
VPS26A-204ENST00000467852 CGNL1Q0VF96 1302 aa16.9■□□□□ 0.3
VPS26A-204ENST00000467852 KDM6AO15550 1401 aaPredicted RBP16.89■□□□□ 0.29
VPS26A-204ENST00000467852 LOC102724428A0A0B4J2F2 783 aa16.89■□□□□ 0.29
VPS26A-204ENST00000467852 TMEM88BA6NKF7 163 aa16.89■□□□□ 0.29
VPS26A-204ENST00000467852 SIK1P57059 783 aa16.89■□□□□ 0.29
VPS26A-204ENST00000467852 MEGF6O75095 1541 aa16.89■□□□□ 0.29
VPS26A-204ENST00000467852 ITGB4P16144 1822 aa16.89■□□□□ 0.29
VPS26A-204ENST00000467852 BEGAINQ9BUH8 593 aa16.88■□□□□ 0.29
VPS26A-204ENST00000467852 RGPD2P0DJD1 1756 aa16.87■□□□□ 0.29
VPS26A-204ENST00000467852 NBPF1Q3BBV0 1214 aa16.87■□□□□ 0.29
VPS26A-204ENST00000467852 NME9Q86XW9 330 aa16.87■□□□□ 0.29
VPS26A-204ENST00000467852 RTCBQ9Y3I0 505 aaKnown RBP16.87■□□□□ 0.29
VPS26A-204ENST00000467852 RAPGEF4Q8WZA2 1011 aa16.86■□□□□ 0.29
VPS26A-204ENST00000467852 TIAM2Q8IVF5 1701 aa16.86■□□□□ 0.29
VPS26A-204ENST00000467852 PASKQ96RG2 1323 aa16.86■□□□□ 0.29
VPS26A-204ENST00000467852 PCDH11XQ9BZA7 1347 aa16.86■□□□□ 0.29
VPS26A-204ENST00000467852 PCDH11YQ9BZA8 1340 aa16.86■□□□□ 0.29
VPS26A-204ENST00000467852 MAP2P11137 1827 aaKnown RBP16.85■□□□□ 0.29
VPS26A-204ENST00000467852 CHRNA5P30532 468 aa16.85■□□□□ 0.29
VPS26A-204ENST00000467852 ATP6V1AP38606 617 aa16.85■□□□□ 0.29
VPS26A-204ENST00000467852 DEFB115Q30KQ5 88 aa16.85■□□□□ 0.29
VPS26A-204ENST00000467852 PRPF38BQ5VTL8 546 aaKnown RBP16.85■□□□□ 0.29
VPS26A-204ENST00000467852 SPINK5Q9NQ38 1064 aaPredicted RBP16.85■□□□□ 0.29
VPS26A-204ENST00000467852 GYS1P13807 737 aa16.84■□□□□ 0.29
VPS26A-204ENST00000467852 MON2Q7Z3U7 1717 aa16.84■□□□□ 0.29
VPS26A-204ENST00000467852 TATP17735 454 aaPredicted RBP16.83■□□□□ 0.28
VPS26A-204ENST00000467852 RFC4P35249 363 aa16.83■□□□□ 0.28
VPS26A-204ENST00000467852 PIGBQ92521 554 aa16.83■□□□□ 0.28
VPS26A-204ENST00000467852 WDR33Q9C0J8 1336 aaKnown RBP16.83■□□□□ 0.28
VPS26A-204ENST00000467852 POTEIP0CG38 1075 aa16.82■□□□□ 0.28
VPS26A-204ENST00000467852 POTEJP0CG39 1038 aa16.82■□□□□ 0.28
VPS26A-204ENST00000467852 ITPK1Q13572 414 aa16.82■□□□□ 0.28
VPS26A-204ENST00000467852 ARHGEF1Q92888 912 aaKnown RBP16.82■□□□□ 0.28
VPS26A-204ENST00000467852 MCOLN1Q9GZU1 580 aa16.82■□□□□ 0.28
VPS26A-204ENST00000467852 RASSF10A6NK89 507 aa16.81■□□□□ 0.28
VPS26A-204ENST00000467852 AMPHP49418 695 aa16.8■□□□□ 0.28
VPS26A-204ENST00000467852 LDHDQ86WU2 507 aa16.8■□□□□ 0.28
VPS26A-204ENST00000467852 HOXC9P31274 260 aa16.79■□□□□ 0.28
VPS26A-204ENST00000467852 CD163L1Q9NR16 1453 aa16.79■□□□□ 0.28
VPS26A-204ENST00000467852 DSG3P32926 999 aa16.78■□□□□ 0.28
VPS26A-204ENST00000467852 NBPF6Q5VWK0 638 aa16.78■□□□□ 0.28
VPS26A-204ENST00000467852 NBPF4Q96M43 638 aa16.78■□□□□ 0.28
VPS26A-204ENST00000467852 DICER1Q9UPY3 1922 aaKnown RBP16.77■□□□□ 0.28
VPS26A-204ENST00000467852 USHBP1Q8N6Y0 703 aa16.77■□□□□ 0.28
VPS26A-204ENST00000467852 CASP8AP2Q9UKL3 1982 aa16.77■□□□□ 0.27
VPS26A-204ENST00000467852 IQCA1LA6NCM1 817 aa16.76■□□□□ 0.27
VPS26A-204ENST00000467852 CYP27B1O15528 508 aa16.76■□□□□ 0.27
VPS26A-204ENST00000467852 ITGBL1O95965 494 aaPredicted RBP16.76■□□□□ 0.27
VPS26A-204ENST00000467852 ERFEQ4G0M1 354 aa16.76■□□□□ 0.27
VPS26A-204ENST00000467852 SBNO2Q9Y2G9 1366 aa16.76■□□□□ 0.27
VPS26A-204ENST00000467852 RC3H1Q5TC82 1133 aaKnown RBP16.75■□□□□ 0.27
VPS26A-204ENST00000467852 TMOD3Q9NYL9 352 aa16.75■□□□□ 0.27
VPS26A-204ENST00000467852 ASAP1Q9ULH1 1129 aa16.75■□□□□ 0.27
VPS26A-204ENST00000467852 ABT1Q9ULW3 272 aaKnown RBP16.75■□□□□ 0.27
VPS26A-204ENST00000467852 RPS6KA4O75676 772 aa16.74■□□□□ 0.27
VPS26A-204ENST00000467852 DGKZQ13574 1117 aa16.74■□□□□ 0.27
VPS26A-204ENST00000467852 HDGFL2Q7Z4V5 671 aaPredicted RBP16.74■□□□□ 0.27
VPS26A-204ENST00000467852 TTLL6Q8N841 843 aa16.74■□□□□ 0.27
VPS26A-204ENST00000467852 MAP3K19Q56UN5 1328 aa16.73■□□□□ 0.27
VPS26A-204ENST00000467852 NFKBIEO00221 500 aa16.73■□□□□ 0.27
VPS26A-204ENST00000467852 DDNO94850 711 aaPredicted RBP16.73■□□□□ 0.27
VPS26A-204ENST00000467852 ECE1P42892 770 aa16.73■□□□□ 0.27
VPS26A-204ENST00000467852 GCC1Q96CN9 775 aa16.73■□□□□ 0.27
VPS26A-204ENST00000467852 TSKSQ9UJT2 592 aa16.73■□□□□ 0.27
VPS26A-204ENST00000467852 DDR1Q08345 913 aa16.72■□□□□ 0.27
VPS26A-204ENST00000467852 PAXIP1Q6ZW49 1069 aaPredicted RBP16.72■□□□□ 0.27
VPS26A-204ENST00000467852 ZNF219Q9P2Y4 722 aaPredicted RBP16.72■□□□□ 0.27
VPS26A-204ENST00000467852 CLEC11AQ9Y240 323 aa16.72■□□□□ 0.27
VPS26A-204ENST00000467852 SCN4AP35499 1836 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms