RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 LAS1LQ9Y4W2 734 aaKnown RBP8.94□□□□□ -0.98
SCAF4-204ENST00000467731 DOT1LQ8TEK3 1739 aa8.94□□□□□ -0.98
SCAF4-204ENST00000467731 IL16Q14005 1332 aa8.94□□□□□ -0.98
SCAF4-204ENST00000467731 E9PSI1 815 aa8.94□□□□□ -0.98
SCAF4-204ENST00000467731 SLFN5Q08AF3 891 aa8.94□□□□□ -0.98
SCAF4-204ENST00000467731 TEFQ10587 303 aa8.94□□□□□ -0.98
SCAF4-204ENST00000467731 CFAP44Q96MT7 982 aa8.93□□□□□ -0.98
SCAF4-204ENST00000467731 MRC1P22897 1456 aa8.93□□□□□ -0.98
SCAF4-204ENST00000467731 DUSP27Q5VZP5 1158 aa8.93□□□□□ -0.98
SCAF4-204ENST00000467731 TSR2Q969E8 191 aaKnown RBP8.93□□□□□ -0.98
SCAF4-204ENST00000467731 IFT57Q9NWB7 429 aa8.93□□□□□ -0.98
SCAF4-204ENST00000467731 MIS18AQ9NYP9 233 aa8.93□□□□□ -0.98
SCAF4-204ENST00000467731 ZNF853P0CG23 659 aa8.92□□□□□ -0.98
SCAF4-204ENST00000467731 GNAI1P63096 354 aa8.92□□□□□ -0.98
SCAF4-204ENST00000467731 FAM182BQ5T319 152 aa8.92□□□□□ -0.98
SCAF4-204ENST00000467731 NFATC2IPQ8NCF5 419 aa8.92□□□□□ -0.98
SCAF4-204ENST00000467731 SLC52A2Q9HAB3 445 aa8.92□□□□□ -0.98
SCAF4-204ENST00000467731 TAF7Q15545 349 aaPredicted RBP8.92□□□□□ -0.98
SCAF4-204ENST00000467731 TRMT2AQ8IZ69 625 aaKnown RBP8.92□□□□□ -0.98
SCAF4-204ENST00000467731 MYH16Q9H6N6 1097 aa8.92□□□□□ -0.98
SCAF4-204ENST00000467731 MBIPQ9NS73 344 aa8.92□□□□□ -0.98
SCAF4-204ENST00000467731 KDM3BQ7LBC6 1761 aa8.92□□□□□ -0.98
SCAF4-204ENST00000467731 FANCIQ9NVI1 1328 aa8.92□□□□□ -0.98
SCAF4-204ENST00000467731 RGS12O14924 1447 aa8.92□□□□□ -0.98
SCAF4-204ENST00000467731 SBF2Q86WG5 1849 aa8.91□□□□□ -0.98
SCAF4-204ENST00000467731 ERVV-2B6SEH9 535 aa8.91□□□□□ -0.98
SCAF4-204ENST00000467731 CHL1O00533 1208 aa8.91□□□□□ -0.98
SCAF4-204ENST00000467731 CABP4P57796 275 aa8.91□□□□□ -0.98
SCAF4-204ENST00000467731 TSPYL4Q9UJ04 414 aa8.91□□□□□ -0.98
SCAF4-204ENST00000467731 BTBD11A6QL63 1104 aa8.91□□□□□ -0.98
SCAF4-204ENST00000467731 SYTL4Q96C24 671 aaPredicted RBP8.91□□□□□ -0.98
SCAF4-204ENST00000467731 ACSBG1Q96GR2 724 aa8.91□□□□□ -0.98
SCAF4-204ENST00000467731 KRT27Q7Z3Y8 459 aa8.9□□□□□ -0.98
SCAF4-204ENST00000467731 PRIM1P49642 420 aaKnown RBP8.89□□□□□ -0.99
SCAF4-204ENST00000467731 TMOD3Q9NYL9 352 aa8.89□□□□□ -0.99
SCAF4-204ENST00000467731 PAPPAQ13219 1627 aa8.89□□□□□ -0.99
SCAF4-204ENST00000467731 BCL9O00512 1426 aa8.89□□□□□ -0.99
SCAF4-204ENST00000467731 SLC39A6Q13433 755 aa8.89□□□□□ -0.99
SCAF4-204ENST00000467731 ERICH6BQ5W0A0 696 aa8.89□□□□□ -0.99
SCAF4-204ENST00000467731 PIGBQ92521 554 aa8.89□□□□□ -0.99
SCAF4-204ENST00000467731 BABAM1Q9NWV8 329 aa8.89□□□□□ -0.99
SCAF4-204ENST00000467731 UBR2Q8IWV8 1755 aa8.88□□□□□ -0.99
SCAF4-204ENST00000467731 KCNQ3O43525 872 aa8.88□□□□□ -0.99
SCAF4-204ENST00000467731 ZNF790Q6PG37 636 aa8.88□□□□□ -0.99
SCAF4-204ENST00000467731 NHSQ6T4R5 1651 aa8.88□□□□□ -0.99
SCAF4-204ENST00000467731 KCNQ2O43526 872 aa8.88□□□□□ -0.99
SCAF4-204ENST00000467731 EXOSC9Q06265 439 aaKnown RBP8.88□□□□□ -0.99
SCAF4-204ENST00000467731 KRT24Q2M2I5 525 aa8.88□□□□□ -0.99
SCAF4-204ENST00000467731 BTAF1O14981 1849 aa8.88□□□□□ -0.99
SCAF4-204ENST00000467731 ELL2O00472 640 aaPredicted RBP8.87□□□□□ -0.99
SCAF4-204ENST00000467731 PTF1AQ7RTS3 328 aa8.87□□□□□ -0.99
SCAF4-204ENST00000467731 TTC5Q8N0Z6 440 aa8.87□□□□□ -0.99
SCAF4-204ENST00000467731 TSPYL6Q8N831 410 aa8.87□□□□□ -0.99
SCAF4-204ENST00000467731 C8orf58Q8NAV2 365 aa8.87□□□□□ -0.99
SCAF4-204ENST00000467731 ASAP1Q9ULH1 1129 aa8.87□□□□□ -0.99
SCAF4-204ENST00000467731 EIF4A1P60842 406 aaKnown RBP8.86□□□□□ -0.99
SCAF4-204ENST00000467731 FAM196AQ6ZSG2 479 aa8.86□□□□□ -0.99
SCAF4-204ENST00000467731 KCPQ6ZWJ8 1503 aa8.86□□□□□ -0.99
SCAF4-204ENST00000467731 C5P01031 1676 aa8.86□□□□□ -0.99
SCAF4-204ENST00000467731 TWISTNBQ3B726 338 aaPredicted RBP8.85□□□□□ -0.99
SCAF4-204ENST00000467731 ZNF496Q96IT1 587 aaPredicted RBP8.85□□□□□ -0.99
SCAF4-204ENST00000467731 PTCD1O75127 700 aaKnown RBP8.85□□□□□ -0.99
SCAF4-204ENST00000467731 ATG3Q9NT62 314 aa8.85□□□□□ -0.99
SCAF4-204ENST00000467731 HEG1Q9ULI3 1381 aa8.85□□□□□ -0.99
SCAF4-204ENST00000467731 VAMP4O75379 141 aa8.84□□□□□ -0.99
SCAF4-204ENST00000467731 FMNL2Q96PY5 1086 aa8.84□□□□□ -0.99
SCAF4-204ENST00000467731 PRAMEF22A3QJZ6 481 aa8.84□□□□□ -0.99
SCAF4-204ENST00000467731 TRIM37O94972 964 aa8.84□□□□□ -0.99
SCAF4-204ENST00000467731 CT47B1P0C2W7 299 aaPredicted RBP8.84□□□□□ -0.99
SCAF4-204ENST00000467731 TSHZ2Q9NRE2 1034 aa8.84□□□□□ -0.99
SCAF4-204ENST00000467731 GIGYF1O75420 1035 aaPredicted RBP8.83□□□□□ -1
SCAF4-204ENST00000467731 BCL11BQ9C0K0 894 aaPredicted RBP8.83□□□□□ -1
SCAF4-204ENST00000467731 RCAN3Q9UKA8 241 aa8.83□□□□□ -1
SCAF4-204ENST00000467731 LAMB4A4D0S4 1761 aa8.83□□□□□ -1
SCAF4-204ENST00000467731 PALLDQ8WX93 1383 aa8.83□□□□□ -1
SCAF4-204ENST00000467731 CACNA1FO60840 1977 aa8.83□□□□□ -1
SCAF4-204ENST00000467731 RBM42Q9BTD8 480 aaKnown RBP8.83□□□□□ -1
SCAF4-204ENST00000467731 LY75O60449 1722 aa8.83□□□□□ -1
SCAF4-204ENST00000467731 BCL2L13Q9BXK5 485 aa8.82□□□□□ -1
SCAF4-204ENST00000467731 SNRPA1P09661 255 aaKnown RBP8.82□□□□□ -1
SCAF4-204ENST00000467731 RARSP54136 660 aaKnown RBP8.82□□□□□ -1
SCAF4-204ENST00000467731 NECTIN2Q92692 538 aa8.82□□□□□ -1
SCAF4-204ENST00000467731 SLC4A9Q96Q91 983 aa8.82□□□□□ -1
SCAF4-204ENST00000467731 TCERG1O14776 1098 aaKnown RBP8.82□□□□□ -1
SCAF4-204ENST00000467731 HOXB7P09629 217 aa8.82□□□□□ -1
SCAF4-204ENST00000467731 EIF2S2P20042 333 aaKnown RBP8.82□□□□□ -1
SCAF4-204ENST00000467731 TJP1Q07157 1748 aa8.82□□□□□ -1
SCAF4-204ENST00000467731 TNS1Q9HBL0 1735 aaKnown RBP8.82□□□□□ -1
SCAF4-204ENST00000467731 SOS1Q07889 1333 aaPredicted RBP8.81□□□□□ -1
SCAF4-204ENST00000467731 BCAR3O75815 825 aa8.81□□□□□ -1
SCAF4-204ENST00000467731 HDGFL1Q5TGJ6 251 aa8.81□□□□□ -1
SCAF4-204ENST00000467731 SSH1Q8WYL5 1049 aa8.81□□□□□ -1
SCAF4-204ENST00000467731 SMARCC1Q92922 1105 aaPredicted RBP8.81□□□□□ -1
SCAF4-204ENST00000467731 ZNF428Q96B54 188 aa8.81□□□□□ -1
SCAF4-204ENST00000467731 USP16Q9Y5T5 823 aa8.81□□□□□ -1
SCAF4-204ENST00000467731 LOC102724428A0A0B4J2F2 783 aa8.81□□□□□ -1
SCAF4-204ENST00000467731 SIK1P57059 783 aa8.81□□□□□ -1
SCAF4-204ENST00000467731 VSIG10Q8N0Z9 540 aa8.8□□□□□ -1
SCAF4-204ENST00000467731 SMC4Q9NTJ3 1288 aa8.8□□□□□ -1
SCAF4-204ENST00000467731 SUPT16HQ9Y5B9 1047 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms