RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 EIF4A1P60842 406 aaKnown RBP23.91■■□□□ 1.42
CHRNA4-203ENST00000467563 IFNL2Q8IZJ0 200 aa23.91■■□□□ 1.42
CHRNA4-203ENST00000467563 API5Q9BZZ5 524 aaKnown RBP23.91■■□□□ 1.42
CHRNA4-203ENST00000467563 SOS1Q07889 1333 aaPredicted RBP23.9■■□□□ 1.42
CHRNA4-203ENST00000467563 BTG4Q9NY30 223 aa23.9■■□□□ 1.42
CHRNA4-203ENST00000467563 RGS12O14924 1447 aa23.89■■□□□ 1.41
CHRNA4-203ENST00000467563 SIPA1L3O60292 1781 aaPredicted RBP23.88■■□□□ 1.41
CHRNA4-203ENST00000467563 SKAP1Q86WV1 359 aa23.87■■□□□ 1.41
CHRNA4-203ENST00000467563 ZBTB40Q9NUA8 1239 aa23.87■■□□□ 1.41
CHRNA4-203ENST00000467563 PARP4Q9UKK3 1724 aaKnown RBP23.87■■□□□ 1.41
CHRNA4-203ENST00000467563 CCDC30Q5VVM6 783 aa23.87■■□□□ 1.41
CHRNA4-203ENST00000467563 NECTIN2Q92692 538 aa23.87■■□□□ 1.41
CHRNA4-203ENST00000467563 COL14A1Q05707 1796 aaKnown RBP23.86■■□□□ 1.41
CHRNA4-203ENST00000467563 SCN11AQ9UI33 1791 aa23.86■■□□□ 1.41
CHRNA4-203ENST00000467563 PTPRCP08575 1304 aa23.86■■□□□ 1.41
CHRNA4-203ENST00000467563 G2E3Q7L622 706 aa23.86■■□□□ 1.41
CHRNA4-203ENST00000467563 UBAP1LF5GYI3 381 aa23.85■■□□□ 1.41
CHRNA4-203ENST00000467563 IL2RBP14784 551 aa23.85■■□□□ 1.41
CHRNA4-203ENST00000467563 STK31Q9BXU1 1019 aa23.85■■□□□ 1.41
CHRNA4-203ENST00000467563 DCAF5Q96JK2 942 aa23.85■■□□□ 1.41
CHRNA4-203ENST00000467563 SLC52A2Q9HAB3 445 aa23.85■■□□□ 1.41
CHRNA4-203ENST00000467563 ZCRB1Q8TBF4 217 aaKnown RBP23.84■■□□□ 1.41
CHRNA4-203ENST00000467563 ZBTB7BO15156 539 aaPredicted RBP23.83■■□□□ 1.41
CHRNA4-203ENST00000467563 HOXB7P09629 217 aa23.83■■□□□ 1.41
CHRNA4-203ENST00000467563 HDGFL1Q5TGJ6 251 aa23.83■■□□□ 1.41
CHRNA4-203ENST00000467563 NFATC2IPQ8NCF5 419 aa23.82■■□□□ 1.4
CHRNA4-203ENST00000467563 USP35Q9P2H5 1018 aa23.82■■□□□ 1.4
CHRNA4-203ENST00000467563 HSP90AB1P08238 724 aaKnown RBP23.82■■□□□ 1.4
CHRNA4-203ENST00000467563 PCDH11XQ9BZA7 1347 aa23.82■■□□□ 1.4
CHRNA4-203ENST00000467563 PCDH11YQ9BZA8 1340 aa23.82■■□□□ 1.4
CHRNA4-203ENST00000467563 MRC1P22897 1456 aa23.81■■□□□ 1.4
CHRNA4-203ENST00000467563 HEG1Q9ULI3 1381 aa23.81■■□□□ 1.4
CHRNA4-203ENST00000467563 INTS3Q68E01 1043 aaKnown RBP23.81■■□□□ 1.4
CHRNA4-203ENST00000467563 ADAMTS2O95450 1211 aa23.8■■□□□ 1.4
CHRNA4-203ENST00000467563 AEBP2Q6ZN18 517 aaPredicted RBP23.8■■□□□ 1.4
CHRNA4-203ENST00000467563 EIF2S2P20042 333 aaKnown RBP23.79■■□□□ 1.4
CHRNA4-203ENST00000467563 FLIIQ13045 1269 aa23.79■■□□□ 1.4
CHRNA4-203ENST00000467563 SLC39A6Q13433 755 aa23.79■■□□□ 1.4
CHRNA4-203ENST00000467563 RWDD1Q9H446 243 aaPredicted RBP23.79■■□□□ 1.4
CHRNA4-203ENST00000467563 GIGYF1O75420 1035 aaPredicted RBP23.78■■□□□ 1.4
CHRNA4-203ENST00000467563 ZNF790Q6PG37 636 aa23.78■■□□□ 1.4
CHRNA4-203ENST00000467563 F6X3S4 739 aa23.77■■□□□ 1.4
CHRNA4-203ENST00000467563 CHMP4BQ9H444 224 aaKnown RBP23.77■■□□□ 1.4
CHRNA4-203ENST00000467563 SHANK3Q9BYB0 1731 aa23.77■■□□□ 1.4
CHRNA4-203ENST00000467563 PRAMEF22A3QJZ6 481 aa23.75■■□□□ 1.39
CHRNA4-203ENST00000467563 NUTM2BA6NNL0 878 aaPredicted RBP23.75■■□□□ 1.39
CHRNA4-203ENST00000467563 NUTM2EB1AL46 878 aaPredicted RBP23.75■■□□□ 1.39
CHRNA4-203ENST00000467563 HDAC1Q13547 482 aaPredicted RBP23.75■■□□□ 1.39
CHRNA4-203ENST00000467563 NUTM2AQ8IVF1 878 aaPredicted RBP23.75■■□□□ 1.39
CHRNA4-203ENST00000467563 DDX54Q8TDD1 881 aaKnown RBP23.75■■□□□ 1.39
CHRNA4-203ENST00000467563 CACNA1FO60840 1977 aa23.75■■□□□ 1.39
CHRNA4-203ENST00000467563 NKX1-1Q15270 411 aaPredicted RBP23.75■■□□□ 1.39
CHRNA4-203ENST00000467563 CHPF2Q9P2E5 772 aa23.75■■□□□ 1.39
CHRNA4-203ENST00000467563 CABP4P57796 275 aa23.74■■□□□ 1.39
CHRNA4-203ENST00000467563 FKBP5Q13451 457 aaPredicted RBP23.74■■□□□ 1.39
CHRNA4-203ENST00000467563 C1orf115Q9H7X2 142 aa23.74■■□□□ 1.39
CHRNA4-203ENST00000467563 PHAXQ9H814 394 aaKnown RBP23.74■■□□□ 1.39
CHRNA4-203ENST00000467563 PLCH1Q4KWH8 1693 aa23.74■■□□□ 1.39
CHRNA4-203ENST00000467563 DISP2A7MBM2 1401 aa23.73■■□□□ 1.39
CHRNA4-203ENST00000467563 CHMP4AQ9BY43 222 aa23.73■■□□□ 1.39
CHRNA4-203ENST00000467563 SLC4A10Q6U841 1118 aa23.72■■□□□ 1.39
CHRNA4-203ENST00000467563 ZNF496Q96IT1 587 aaPredicted RBP23.71■■□□□ 1.39
CHRNA4-203ENST00000467563 RBM19Q9Y4C8 960 aaKnown RBP23.71■■□□□ 1.39
CHRNA4-203ENST00000467563 ERVV-2B6SEH9 535 aa23.7■■□□□ 1.38
CHRNA4-203ENST00000467563 ANXA1P04083 346 aa23.7■■□□□ 1.38
CHRNA4-203ENST00000467563 CCT4P50991 539 aaKnown RBP23.69■■□□□ 1.38
CHRNA4-203ENST00000467563 NRAPQ86VF7 1730 aa23.69■■□□□ 1.38
CHRNA4-203ENST00000467563 TTC5Q8N0Z6 440 aa23.69■■□□□ 1.38
CHRNA4-203ENST00000467563 CERKQ8TCT0 537 aa23.69■■□□□ 1.38
CHRNA4-203ENST00000467563 DBF4Q9UBU7 674 aaPredicted RBP23.69■■□□□ 1.38
CHRNA4-203ENST00000467563 RGS3P49796 1198 aa23.68■■□□□ 1.38
CHRNA4-203ENST00000467563 MEIS3Q99687 375 aa23.68■■□□□ 1.38
CHRNA4-203ENST00000467563 PROSER3Q2NL68 480 aa23.68■■□□□ 1.38
CHRNA4-203ENST00000467563 SIRT2Q8IXJ6 389 aa23.67■■□□□ 1.38
CHRNA4-203ENST00000467563 PDZRN3Q9UPQ7 1066 aa23.67■■□□□ 1.38
CHRNA4-203ENST00000467563 C5P01031 1676 aa23.67■■□□□ 1.38
CHRNA4-203ENST00000467563 SMC5Q8IY18 1101 aa23.66■■□□□ 1.38
CHRNA4-203ENST00000467563 SLIT2O94813 1529 aa23.65■■□□□ 1.38
CHRNA4-203ENST00000467563 JCADQ9P266 1359 aa23.65■■□□□ 1.38
CHRNA4-203ENST00000467563 FMNL2Q96PY5 1086 aa23.65■■□□□ 1.38
CHRNA4-203ENST00000467563 SPATA31A1Q5TZJ5 1347 aa23.64■■□□□ 1.38
CHRNA4-203ENST00000467563 PXDNLA1KZ92 1463 aa23.64■■□□□ 1.38
CHRNA4-203ENST00000467563 TOGARAM1Q9Y4F4 1720 aa23.64■■□□□ 1.37
CHRNA4-203ENST00000467563 PDIA6Q15084 440 aa23.64■■□□□ 1.37
CHRNA4-203ENST00000467563 GLI3P10071 1580 aa23.63■■□□□ 1.37
CHRNA4-203ENST00000467563 SNRPA1P09661 255 aaKnown RBP23.63■■□□□ 1.37
CHRNA4-203ENST00000467563 ATP10DQ9P241 1426 aa23.62■■□□□ 1.37
CHRNA4-203ENST00000467563 DDX21Q9NR30 783 aaKnown RBP eCLIP23.62■■□□□ 1.37
CHRNA4-203ENST00000467563 USP16Q9Y5T5 823 aa23.62■■□□□ 1.37
CHRNA4-203ENST00000467563 WNK3Q9BYP7 1800 aa23.62■■□□□ 1.37
CHRNA4-203ENST00000467563 PI4KAP2A4QPH2 592 aa23.61■■□□□ 1.37
CHRNA4-203ENST00000467563 PI4KAP1Q8N8J0 262 aa23.61■■□□□ 1.37
CHRNA4-203ENST00000467563 NWD2Q9ULI1 1742 aa23.61■■□□□ 1.37
CHRNA4-203ENST00000467563 EXOC5O00471 708 aa23.61■■□□□ 1.37
CHRNA4-203ENST00000467563 HYPKQ9NX55 129 aa23.61■■□□□ 1.37
CHRNA4-203ENST00000467563 ADCY9O60503 1353 aa23.61■■□□□ 1.37
CHRNA4-203ENST00000467563 N4BP2Q86UW6 1770 aaPredicted RBP23.6■■□□□ 1.37
CHRNA4-203ENST00000467563 THRAP3Q9Y2W1 955 aaKnown RBP23.6■■□□□ 1.37
CHRNA4-203ENST00000467563 SPATA31A5Q5VU36 1347 aa23.6■■□□□ 1.37
CHRNA4-203ENST00000467563 SPATA31A7Q8IWB4 1347 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms