RNA–Protein interactions for RNA: ENST00000467343.1

CRAT-209, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 399 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-209ENST00000467343 MSL1Q68DK7 614 aa16.59■□□□□ 0.25
CRAT-209ENST00000467343 FHDC1Q9C0D6 1143 aaPredicted RBP16.59■□□□□ 0.25
CRAT-209ENST00000467343 FLAD1Q8NFF5 587 aa16.58■□□□□ 0.24
CRAT-209ENST00000467343 ATG3Q9NT62 314 aa16.58■□□□□ 0.24
CRAT-209ENST00000467343 C4BP0C0L5 1744 aa16.58■□□□□ 0.24
CRAT-209ENST00000467343 TAF1LQ8IZX4 1826 aa16.58■□□□□ 0.24
CRAT-209ENST00000467343 KDRP35968 1356 aa16.57■□□□□ 0.24
CRAT-209ENST00000467343 YY1P25490 414 aa16.57■□□□□ 0.24
CRAT-209ENST00000467343 AKAP4Q5JQC9 854 aa16.57■□□□□ 0.24
CRAT-209ENST00000467343 COL23A1Q86Y22 540 aaPredicted RBP16.57■□□□□ 0.24
CRAT-209ENST00000467343 NUDCQ9Y266 331 aa16.57■□□□□ 0.24
CRAT-209ENST00000467343 KDM6AO15550 1401 aaPredicted RBP16.56■□□□□ 0.24
CRAT-209ENST00000467343 GNPATO15228 680 aa16.56■□□□□ 0.24
CRAT-209ENST00000467343 PELP1Q8IZL8 1130 aaKnown RBP16.56■□□□□ 0.24
CRAT-209ENST00000467343 PTCD1O75127 700 aaKnown RBP16.55■□□□□ 0.24
CRAT-209ENST00000467343 NFATC2IPQ8NCF5 419 aa16.55■□□□□ 0.24
CRAT-209ENST00000467343 LINC00116Q8NCU8 138 aa16.55■□□□□ 0.24
CRAT-209ENST00000467343 SYT17Q9BSW7 474 aa16.54■□□□□ 0.24
CRAT-209ENST00000467343 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.53■□□□□ 0.24
CRAT-209ENST00000467343 ITPK1Q13572 414 aa16.53■□□□□ 0.24
CRAT-209ENST00000467343 U2AF1L5P0DN76 240 aaPredicted RBP16.52■□□□□ 0.24
CRAT-209ENST00000467343 PPP2R1AP30153 589 aa16.52■□□□□ 0.24
CRAT-209ENST00000467343 U2AF1Q01081 240 aaKnown RBP eCLIP16.52■□□□□ 0.24
CRAT-209ENST00000467343 MTHFSDQ2M296 383 aaKnown RBP16.52■□□□□ 0.24
CRAT-209ENST00000467343 SMIM5Q71RC9 77 aa16.52■□□□□ 0.24
CRAT-209ENST00000467343 SGIP1Q9BQI5 828 aa16.52■□□□□ 0.24
CRAT-209ENST00000467343 SCN11AQ9UI33 1791 aa16.51■□□□□ 0.23
CRAT-209ENST00000467343 COL3A1P02461 1466 aaPredicted RBP16.51■□□□□ 0.23
CRAT-209ENST00000467343 RNMTO43148 476 aaKnown RBP16.51■□□□□ 0.23
CRAT-209ENST00000467343 GAS2L2Q8NHY3 880 aa16.51■□□□□ 0.23
CRAT-209ENST00000467343 RTCBQ9Y3I0 505 aaKnown RBP16.51■□□□□ 0.23
CRAT-209ENST00000467343 SSFA2P28290 1259 aa16.5■□□□□ 0.23
CRAT-209ENST00000467343 GPR162Q16538 588 aa16.5■□□□□ 0.23
CRAT-209ENST00000467343 SLC52A2Q9HAB3 445 aa16.5■□□□□ 0.23
CRAT-209ENST00000467343 LGR6Q9HBX8 967 aa16.5■□□□□ 0.23
CRAT-209ENST00000467343 NEFMP07197 916 aa16.49■□□□□ 0.23
CRAT-209ENST00000467343 PRKAR2BP31323 418 aa16.49■□□□□ 0.23
CRAT-209ENST00000467343 TEFQ10587 303 aa16.49■□□□□ 0.23
CRAT-209ENST00000467343 UBR3Q6ZT12 1888 aa16.49■□□□□ 0.23
CRAT-209ENST00000467343 VIRMAQ69YN4 1812 aaKnown RBP16.49■□□□□ 0.23
CRAT-209ENST00000467343 TRAPPC3LQ5T215 181 aa16.48■□□□□ 0.23
CRAT-209ENST00000467343 TTC5Q8N0Z6 440 aa16.48■□□□□ 0.23
CRAT-209ENST00000467343 MAP3K5Q99683 1374 aa16.48■□□□□ 0.23
CRAT-209ENST00000467343 GNAT3A8MTJ3 354 aa16.47■□□□□ 0.23
CRAT-209ENST00000467343 SLC39A6Q13433 755 aa16.47■□□□□ 0.23
CRAT-209ENST00000467343 MIER1Q8N108 512 aa16.47■□□□□ 0.23
CRAT-209ENST00000467343 RFC4P35249 363 aa16.46■□□□□ 0.23
CRAT-209ENST00000467343 AMIGO3Q86WK7 504 aa16.46■□□□□ 0.23
CRAT-209ENST00000467343 RTF1Q92541 710 aaKnown RBP16.45■□□□□ 0.22
CRAT-209ENST00000467343 SLC4A9Q96Q91 983 aa16.45■□□□□ 0.22
CRAT-209ENST00000467343 CNTNAP4Q9C0A0 1308 aa16.45■□□□□ 0.22
CRAT-209ENST00000467343 CRKLP46109 303 aaKnown RBP16.44■□□□□ 0.22
CRAT-209ENST00000467343 NLGN2Q8NFZ4 835 aa16.44■□□□□ 0.22
CRAT-209ENST00000467343 ZNF831Q5JPB2 1677 aa16.43■□□□□ 0.22
CRAT-209ENST00000467343 COL5A3P25940 1745 aaPredicted RBP16.43■□□□□ 0.22
CRAT-209ENST00000467343 COL24A1Q17RW2 1714 aa16.43■□□□□ 0.22
CRAT-209ENST00000467343 RC3H1Q5TC82 1133 aaKnown RBP16.43■□□□□ 0.22
CRAT-209ENST00000467343 RSPH6AQ9H0K4 717 aa16.43■□□□□ 0.22
CRAT-209ENST00000467343 RPS6KA4O75676 772 aa16.42■□□□□ 0.22
CRAT-209ENST00000467343 ADRA2BP18089 450 aa16.42■□□□□ 0.22
CRAT-209ENST00000467343 DNAJC10Q8IXB1 793 aa16.42■□□□□ 0.22
CRAT-209ENST00000467343 ARHGEF1Q92888 912 aaKnown RBP16.42■□□□□ 0.22
CRAT-209ENST00000467343 MRC1P22897 1456 aa16.42■□□□□ 0.22
CRAT-209ENST00000467343 PHACTR3Q96KR7 559 aa16.41■□□□□ 0.22
CRAT-209ENST00000467343 TJP1Q07157 1748 aa16.41■□□□□ 0.22
CRAT-209ENST00000467343 FCHSD2O94868 740 aa16.4■□□□□ 0.22
CRAT-209ENST00000467343 MMP10P09238 476 aa16.4■□□□□ 0.22
CRAT-209ENST00000467343 WWC3Q9ULE0 1092 aa16.4■□□□□ 0.22
CRAT-209ENST00000467343 NPM2Q86SE8 214 aaKnown RBP16.39■□□□□ 0.21
CRAT-209ENST00000467343 NLGN1Q8N2Q7 840 aa16.39■□□□□ 0.21
CRAT-209ENST00000467343 CCDC87Q9NVE4 849 aa16.39■□□□□ 0.21
CRAT-209ENST00000467343 ZNF330Q9Y3S2 320 aaPredicted RBP16.39■□□□□ 0.21
CRAT-209ENST00000467343 CD2APQ9Y5K6 639 aa16.39■□□□□ 0.21
CRAT-209ENST00000467343 PARP3Q9Y6F1 533 aa16.39■□□□□ 0.21
CRAT-209ENST00000467343 MAPK8IP3Q9UPT6 1336 aa16.39■□□□□ 0.21
CRAT-209ENST00000467343 BTBD11A6QL63 1104 aa16.38■□□□□ 0.21
CRAT-209ENST00000467343 ZPR1O75312 459 aa16.38■□□□□ 0.21
CRAT-209ENST00000467343 RALBP1Q15311 655 aa16.38■□□□□ 0.21
CRAT-209ENST00000467343 IL17REQ8NFR9 667 aa16.38■□□□□ 0.21
CRAT-209ENST00000467343 PNNQ9H307 717 aaKnown RBP16.38■□□□□ 0.21
CRAT-209ENST00000467343 ANP32CO43423 234 aa16.37■□□□□ 0.21
CRAT-209ENST00000467343 STARD3NLO95772 234 aa16.37■□□□□ 0.21
CRAT-209ENST00000467343 CANXP27824 592 aaKnown RBP16.37■□□□□ 0.21
CRAT-209ENST00000467343 MCM10Q7L590 875 aa16.37■□□□□ 0.21
CRAT-209ENST00000467343 ADAMTS7Q9UKP4 1686 aa16.37■□□□□ 0.21
CRAT-209ENST00000467343 C4AP0C0L4 1744 aa16.36■□□□□ 0.21
CRAT-209ENST00000467343 KCPQ6ZWJ8 1503 aa16.36■□□□□ 0.21
CRAT-209ENST00000467343 ZNF790Q6PG37 636 aa16.36■□□□□ 0.21
CRAT-209ENST00000467343 FMNL2Q96PY5 1086 aa16.36■□□□□ 0.21
CRAT-209ENST00000467343 SRP68Q9UHB9 627 aaKnown RBP16.36■□□□□ 0.21
CRAT-209ENST00000467343 MYH14Q7Z406 1995 aaKnown RBP16.36■□□□□ 0.21
CRAT-209ENST00000467343 UTRNP46939 3433 aa16.36■□□□□ 0.21
CRAT-209ENST00000467343 CICQ96RK0 1608 aaPredicted RBP16.35■□□□□ 0.21
CRAT-209ENST00000467343 CYP19A1P11511 503 aaPredicted RBP16.35■□□□□ 0.21
CRAT-209ENST00000467343 GYS1P13807 737 aa16.35■□□□□ 0.21
CRAT-209ENST00000467343 INTS5Q6P9B9 1019 aaKnown RBP16.35■□□□□ 0.21
CRAT-209ENST00000467343 VSIG10Q8N0Z9 540 aa16.35■□□□□ 0.21
CRAT-209ENST00000467343 GRIN3BO60391 1043 aa16.34■□□□□ 0.21
CRAT-209ENST00000467343 DCTN1Q14203 1278 aa16.34■□□□□ 0.21
CRAT-209ENST00000467343 ZNF496Q96IT1 587 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms