RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 TRERF1Q96PN7 1200 aa10.58□□□□□ -0.72
ATG3-204ENST00000467275 SRSF11Q05519 484 aaKnown RBP10.57□□□□□ -0.72
ATG3-204ENST00000467275 TLR1Q15399 786 aa10.57□□□□□ -0.72
ATG3-204ENST00000467275 NUCKS1Q9H1E3 243 aaKnown RBP10.57□□□□□ -0.72
ATG3-204ENST00000467275 GPAMQ9HCL2 828 aa10.57□□□□□ -0.72
ATG3-204ENST00000467275 WHAMMQ8TF30 809 aa10.56□□□□□ -0.72
ATG3-204ENST00000467275 ADAMTS8Q9UP79 889 aa10.56□□□□□ -0.72
ATG3-204ENST00000467275 A0A1B0GTH6 734 aa10.55□□□□□ -0.72
ATG3-204ENST00000467275 PIK3CDO00329 1044 aa10.55□□□□□ -0.72
ATG3-204ENST00000467275 GDF10P55107 478 aa10.55□□□□□ -0.72
ATG3-204ENST00000467275 C4orf17Q53FE4 359 aa10.55□□□□□ -0.72
ATG3-204ENST00000467275 ALG2Q9H553 416 aa10.55□□□□□ -0.72
ATG3-204ENST00000467275 MBIPQ9NS73 344 aa10.55□□□□□ -0.72
ATG3-204ENST00000467275 INHAP05111 366 aa10.54□□□□□ -0.72
ATG3-204ENST00000467275 SKIP12755 728 aa10.54□□□□□ -0.72
ATG3-204ENST00000467275 SCNN1DP51172 638 aa10.54□□□□□ -0.72
ATG3-204ENST00000467275 PPARGC1BQ86YN6 1023 aaKnown RBP10.54□□□□□ -0.72
ATG3-204ENST00000467275 RHBDD1Q8TEB9 315 aa10.54□□□□□ -0.72
ATG3-204ENST00000467275 CSB-PGBD3P0DP91 1061 aa10.53□□□□□ -0.72
ATG3-204ENST00000467275 EML3Q32P44 896 aa10.53□□□□□ -0.72
ATG3-204ENST00000467275 PGBD3Q8N328 593 aa10.53□□□□□ -0.72
ATG3-204ENST00000467275 MAP3K10Q02779 954 aa10.52□□□□□ -0.73
ATG3-204ENST00000467275 TMEM132AQ24JP5 1023 aa10.51□□□□□ -0.73
ATG3-204ENST00000467275 LYPD4Q6UWN0 246 aa10.51□□□□□ -0.73
ATG3-204ENST00000467275 SERTAD1Q9UHV2 236 aa10.51□□□□□ -0.73
ATG3-204ENST00000467275 IGF1RP08069 1367 aa10.51□□□□□ -0.73
ATG3-204ENST00000467275 ARHGEF15O94989 841 aa10.5□□□□□ -0.73
ATG3-204ENST00000467275 MX2P20592 715 aa10.5□□□□□ -0.73
ATG3-204ENST00000467275 MSX1P28360 303 aa10.5□□□□□ -0.73
ATG3-204ENST00000467275 NFATC2IPQ8NCF5 419 aa10.5□□□□□ -0.73
ATG3-204ENST00000467275 RUBCNLQ9H714 662 aa10.5□□□□□ -0.73
ATG3-204ENST00000467275 NSFL1CQ9UNZ2 370 aaKnown RBP10.5□□□□□ -0.73
ATG3-204ENST00000467275 NOD1Q9Y239 953 aa10.5□□□□□ -0.73
ATG3-204ENST00000467275 LZTS3O60299 673 aaPredicted RBP10.49□□□□□ -0.73
ATG3-204ENST00000467275 CELA2BP08218 269 aaPredicted RBP10.49□□□□□ -0.73
ATG3-204ENST00000467275 PLA2G4AP47712 749 aa10.49□□□□□ -0.73
ATG3-204ENST00000467275 SMTNP53814 917 aa10.49□□□□□ -0.73
ATG3-204ENST00000467275 POM121CA8CG34 1229 aa10.48□□□□□ -0.73
ATG3-204ENST00000467275 RNF225M0QZC1 329 aaPredicted RBP10.48□□□□□ -0.73
ATG3-204ENST00000467275 MARSP56192 900 aaKnown RBP10.48□□□□□ -0.73
ATG3-204ENST00000467275 PSME1Q06323 249 aa10.48□□□□□ -0.73
ATG3-204ENST00000467275 KCNMA1Q12791 1236 aa10.48□□□□□ -0.73
ATG3-204ENST00000467275 NCOA4Q13772 614 aa10.48□□□□□ -0.73
ATG3-204ENST00000467275 EFHC2Q5JST6 749 aa10.48□□□□□ -0.73
ATG3-204ENST00000467275 TBC1D9Q6ZT07 1266 aa10.48□□□□□ -0.73
ATG3-204ENST00000467275 NIFKQ9BYG3 293 aaKnown RBP10.48□□□□□ -0.73
ATG3-204ENST00000467275 PHF24Q9UPV7 400 aa10.48□□□□□ -0.73
ATG3-204ENST00000467275 PCDHGA11Q9Y5H2 935 aa10.48□□□□□ -0.73
ATG3-204ENST00000467275 TMEM229AB2RXF0 380 aa10.47□□□□□ -0.73
ATG3-204ENST00000467275 THBS1P07996 1170 aa10.47□□□□□ -0.73
ATG3-204ENST00000467275 GTF2IP78347 998 aa10.47□□□□□ -0.73
ATG3-204ENST00000467275 LBRQ14739 615 aaKnown RBP10.47□□□□□ -0.73
ATG3-204ENST00000467275 CFHR5Q9BXR6 569 aa10.47□□□□□ -0.73
ATG3-204ENST00000467275 ENAMQ9NRM1 1142 aa10.47□□□□□ -0.73
ATG3-204ENST00000467275 DEPDC4Q8N2C3 294 aa10.46□□□□□ -0.73
ATG3-204ENST00000467275 AIDAQ96BJ3 306 aa10.46□□□□□ -0.73
ATG3-204ENST00000467275 A6NJY4 79 aa10.45□□□□□ -0.74
ATG3-204ENST00000467275 USP17L5A8MUK1 530 aa10.45□□□□□ -0.74
ATG3-204ENST00000467275 HDGFL1Q5TGJ6 251 aa10.45□□□□□ -0.74
ATG3-204ENST00000467275 SLC4A9Q96Q91 983 aa10.45□□□□□ -0.74
ATG3-204ENST00000467275 BACH1O14867 736 aa10.44□□□□□ -0.74
ATG3-204ENST00000467275 CDK2AP1O14519 115 aa10.43□□□□□ -0.74
ATG3-204ENST00000467275 BCRP11274 1271 aa10.43□□□□□ -0.74
ATG3-204ENST00000467275 ADAMTS19Q8TE59 1207 aa10.43□□□□□ -0.74
ATG3-204ENST00000467275 ACDQ96AP0 544 aa10.43□□□□□ -0.74
ATG3-204ENST00000467275 MAP2K3P46734 347 aa10.42□□□□□ -0.74
ATG3-204ENST00000467275 MTFR1Q15390 333 aa10.42□□□□□ -0.74
ATG3-204ENST00000467275 TMEM151AQ8N4L1 468 aa10.42□□□□□ -0.74
ATG3-204ENST00000467275 C1orf216Q8TAB5 229 aa10.42□□□□□ -0.74
ATG3-204ENST00000467275 SCARF2Q96GP6 870 aaPredicted RBP10.42□□□□□ -0.74
ATG3-204ENST00000467275 CRISPLD1Q9H336 500 aa10.42□□□□□ -0.74
ATG3-204ENST00000467275 CABP1Q9NZU7 370 aa10.42□□□□□ -0.74
ATG3-204ENST00000467275 RASSF7Q02833 373 aa10.41□□□□□ -0.74
ATG3-204ENST00000467275 UBAP2LQ14157 1087 aaKnown RBP10.41□□□□□ -0.74
ATG3-204ENST00000467275 NBPF1Q3BBV0 1214 aa10.41□□□□□ -0.74
ATG3-204ENST00000467275 TRIM50Q86XT4 487 aa10.41□□□□□ -0.74
ATG3-204ENST00000467275 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.41□□□□□ -0.74
ATG3-204ENST00000467275 NEDD1Q8NHV4 660 aa10.41□□□□□ -0.74
ATG3-204ENST00000467275 CLUAP1Q96AJ1 413 aa10.41□□□□□ -0.74
ATG3-204ENST00000467275 ATXN7L1Q9ULK2 861 aaPredicted RBP10.41□□□□□ -0.74
ATG3-204ENST00000467275 GDF11O95390 407 aa10.4□□□□□ -0.74
ATG3-204ENST00000467275 IRS1P35568 1242 aa10.4□□□□□ -0.74
ATG3-204ENST00000467275 GSK3AP49840 483 aa10.4□□□□□ -0.74
ATG3-204ENST00000467275 ARSJQ5FYB0 599 aaPredicted RBP10.4□□□□□ -0.74
ATG3-204ENST00000467275 FIGNL1Q6PIW4 674 aa10.4□□□□□ -0.74
ATG3-204ENST00000467275 ABHD17AQ96GS6 310 aa10.4□□□□□ -0.74
ATG3-204ENST00000467275 ZNF358Q9NW07 568 aa10.4□□□□□ -0.74
ATG3-204ENST00000467275 IQSEC3Q9UPP2 1182 aaPredicted RBP10.4□□□□□ -0.74
ATG3-204ENST00000467275 USP17L3A6NCW0 530 aa10.39□□□□□ -0.75
ATG3-204ENST00000467275 USP17L4A6NCW7 530 aa10.39□□□□□ -0.75
ATG3-204ENST00000467275 TATP17735 454 aaPredicted RBP10.39□□□□□ -0.75
ATG3-204ENST00000467275 ATP4AP20648 1035 aa10.39□□□□□ -0.75
ATG3-204ENST00000467275 USP17L2Q6R6M4 530 aa10.39□□□□□ -0.75
ATG3-204ENST00000467275 USP17L1Q7RTZ2 530 aa10.39□□□□□ -0.75
ATG3-204ENST00000467275 OXCT2Q9BYC2 517 aaPredicted RBP10.39□□□□□ -0.75
ATG3-204ENST00000467275 ATP9BO43861 1147 aa10.38□□□□□ -0.75
ATG3-204ENST00000467275 ATP1A2P50993 1020 aa10.38□□□□□ -0.75
ATG3-204ENST00000467275 PROSER2Q86WR7 435 aaPredicted RBP10.38□□□□□ -0.75
ATG3-204ENST00000467275 PLEKHM2Q8IWE5 1019 aa10.38□□□□□ -0.75
ATG3-204ENST00000467275 UCN2Q96RP3 112 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms