RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 NBPF4Q96M43 638 aa12.25□□□□□ -0.45
APOBEC1-202ENST00000467171 PCDH10Q9P2E7 1040 aa12.25□□□□□ -0.45
APOBEC1-202ENST00000467171 CRB1P82279 1406 aa12.25□□□□□ -0.45
APOBEC1-202ENST00000467171 FAM83GA6ND36 823 aa12.24□□□□□ -0.45
APOBEC1-202ENST00000467171 IPO8O15397 1037 aaKnown RBP12.24□□□□□ -0.45
APOBEC1-202ENST00000467171 RTF1Q92541 710 aaKnown RBP12.24□□□□□ -0.45
APOBEC1-202ENST00000467171 KIAA0232Q92628 1395 aa12.24□□□□□ -0.45
APOBEC1-202ENST00000467171 LTV1Q96GA3 475 aaPredicted RBP12.24□□□□□ -0.45
APOBEC1-202ENST00000467171 KIF16BQ96L93 1317 aa12.24□□□□□ -0.45
APOBEC1-202ENST00000467171 PLEKHG2Q9H7P9 1386 aa12.24□□□□□ -0.45
APOBEC1-202ENST00000467171 PLSCR2Q9NRY7 297 aa12.24□□□□□ -0.45
APOBEC1-202ENST00000467171 SMC4Q9NTJ3 1288 aa12.24□□□□□ -0.45
APOBEC1-202ENST00000467171 BABAM1Q9NWV8 329 aa12.24□□□□□ -0.45
APOBEC1-202ENST00000467171 ALS2Q96Q42 1657 aa12.23□□□□□ -0.45
APOBEC1-202ENST00000467171 ABCC6O95255 1503 aa12.23□□□□□ -0.45
APOBEC1-202ENST00000467171 CPDO75976 1380 aa12.23□□□□□ -0.45
APOBEC1-202ENST00000467171 DCTN1Q14203 1278 aa12.23□□□□□ -0.45
APOBEC1-202ENST00000467171 ARHGAP45Q92619 1136 aa12.23□□□□□ -0.45
APOBEC1-202ENST00000467171 MED1Q15648 1581 aaPredicted RBP12.22□□□□□ -0.45
APOBEC1-202ENST00000467171 GNAT3A8MTJ3 354 aa12.22□□□□□ -0.45
APOBEC1-202ENST00000467171 AMOTQ4VCS5 1084 aa12.22□□□□□ -0.45
APOBEC1-202ENST00000467171 MCM10Q7L590 875 aa12.22□□□□□ -0.45
APOBEC1-202ENST00000467171 ANKRD24Q8TF21 1146 aa12.22□□□□□ -0.45
APOBEC1-202ENST00000467171 FRAT1Q92837 279 aaPredicted RBP12.22□□□□□ -0.45
APOBEC1-202ENST00000467171 DDX17Q92841 729 aaKnown RBP12.22□□□□□ -0.45
APOBEC1-202ENST00000467171 TSHZ2Q9NRE2 1034 aa12.22□□□□□ -0.45
APOBEC1-202ENST00000467171 LAS1LQ9Y4W2 734 aaKnown RBP12.22□□□□□ -0.45
APOBEC1-202ENST00000467171 MAP3K5Q99683 1374 aa12.21□□□□□ -0.45
APOBEC1-202ENST00000467171 ERBB3P21860 1342 aa12.21□□□□□ -0.45
APOBEC1-202ENST00000467171 KDM2BQ8NHM5 1336 aa12.21□□□□□ -0.45
APOBEC1-202ENST00000467171 TWISTNBQ3B726 338 aaPredicted RBP12.21□□□□□ -0.45
APOBEC1-202ENST00000467171 ATF7IPQ6VMQ6 1270 aa12.21□□□□□ -0.45
APOBEC1-202ENST00000467171 DZIP1LQ8IYY4 767 aaKnown RBP12.21□□□□□ -0.45
APOBEC1-202ENST00000467171 PDCD7Q8N8D1 485 aaKnown RBP12.21□□□□□ -0.45
APOBEC1-202ENST00000467171 PANK1Q8TE04 598 aa12.21□□□□□ -0.45
APOBEC1-202ENST00000467171 BCL2L13Q9BXK5 485 aa12.21□□□□□ -0.45
APOBEC1-202ENST00000467171 SOS1Q07889 1333 aaPredicted RBP12.2□□□□□ -0.46
APOBEC1-202ENST00000467171 PLEKHO1Q53GL0 409 aaPredicted RBP12.2□□□□□ -0.46
APOBEC1-202ENST00000467171 CENPQQ7L2Z9 268 aaPredicted RBP12.2□□□□□ -0.46
APOBEC1-202ENST00000467171 MRPL50Q8N5N7 158 aaKnown RBP12.2□□□□□ -0.46
APOBEC1-202ENST00000467171 TSPYL6Q8N831 410 aa12.2□□□□□ -0.46
APOBEC1-202ENST00000467171 C8orf58Q8NAV2 365 aa12.2□□□□□ -0.46
APOBEC1-202ENST00000467171 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.2□□□□□ -0.46
APOBEC1-202ENST00000467171 AXIN2Q9Y2T1 843 aa12.2□□□□□ -0.46
APOBEC1-202ENST00000467171 COG6Q9Y2V7 657 aa12.2□□□□□ -0.46
APOBEC1-202ENST00000467171 XIRP1Q702N8 1843 aaKnown RBP12.19□□□□□ -0.46
APOBEC1-202ENST00000467171 RLBP1P12271 317 aa12.19□□□□□ -0.46
APOBEC1-202ENST00000467171 TRIM27P14373 513 aa12.19□□□□□ -0.46
APOBEC1-202ENST00000467171 ZC3H6P61129 1189 aaKnown RBP12.19□□□□□ -0.46
APOBEC1-202ENST00000467171 MVPQ14764 893 aaKnown RBP12.19□□□□□ -0.46
APOBEC1-202ENST00000467171 IL17REQ8NFR9 667 aa12.19□□□□□ -0.46
APOBEC1-202ENST00000467171 CLUAP1Q96AJ1 413 aa12.19□□□□□ -0.46
APOBEC1-202ENST00000467171 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.19□□□□□ -0.46
APOBEC1-202ENST00000467171 NOB1Q9ULX3 412 aaKnown RBP12.19□□□□□ -0.46
APOBEC1-202ENST00000467171 CEMIPQ8WUJ3 1361 aa12.18□□□□□ -0.46
APOBEC1-202ENST00000467171 ZBTB7CA1YPR0 619 aa12.18□□□□□ -0.46
APOBEC1-202ENST00000467171 AKAP4Q5JQC9 854 aa12.18□□□□□ -0.46
APOBEC1-202ENST00000467171 FTSJ3Q8IY81 847 aaKnown RBP12.18□□□□□ -0.46
APOBEC1-202ENST00000467171 USHBP1Q8N6Y0 703 aa12.18□□□□□ -0.46
APOBEC1-202ENST00000467171 LRRC59Q96AG4 307 aaKnown RBP12.18□□□□□ -0.46
APOBEC1-202ENST00000467171 TAF7Q15545 349 aaPredicted RBP12.17□□□□□ -0.46
APOBEC1-202ENST00000467171 L3MBTL3Q96JM7 780 aaPredicted RBP12.17□□□□□ -0.46
APOBEC1-202ENST00000467171 TSPYL4Q9UJ04 414 aa12.17□□□□□ -0.46
APOBEC1-202ENST00000467171 DDX19BQ9UMR2 479 aa12.17□□□□□ -0.46
APOBEC1-202ENST00000467171 OVOS2A0A0G2JMS6 1433 aa12.17□□□□□ -0.46
APOBEC1-202ENST00000467171 LTN1O94822 1766 aa12.16□□□□□ -0.46
APOBEC1-202ENST00000467171 API5Q9BZZ5 524 aaKnown RBP12.16□□□□□ -0.46
APOBEC1-202ENST00000467171 CHMP4BQ9H444 224 aaKnown RBP12.16□□□□□ -0.46
APOBEC1-202ENST00000467171 TNNQ9UQP3 1299 aa12.16□□□□□ -0.46
APOBEC1-202ENST00000467171 CAMTA1Q9Y6Y1 1673 aa12.16□□□□□ -0.46
APOBEC1-202ENST00000467171 TCERG1O14776 1098 aaKnown RBP12.15□□□□□ -0.46
APOBEC1-202ENST00000467171 CABLES1Q8TDN4 633 aa12.15□□□□□ -0.46
APOBEC1-202ENST00000467171 LMO7Q8WWI1 1683 aa12.14□□□□□ -0.47
APOBEC1-202ENST00000467171 ELL2O00472 640 aaPredicted RBP12.14□□□□□ -0.47
APOBEC1-202ENST00000467171 ZNF530Q6P9A1 599 aaPredicted RBP12.14□□□□□ -0.47
APOBEC1-202ENST00000467171 ILDR1Q86SU0 546 aaPredicted RBP12.14□□□□□ -0.47
APOBEC1-202ENST00000467171 LRRC37A3O60309 1634 aa12.14□□□□□ -0.47
APOBEC1-202ENST00000467171 ABCC4O15439 1325 aa12.13□□□□□ -0.47
APOBEC1-202ENST00000467171 C3orf67Q6ZVT6 689 aa12.13□□□□□ -0.47
APOBEC1-202ENST00000467171 TMEM57Q8N5G2 664 aa12.13□□□□□ -0.47
APOBEC1-202ENST00000467171 RAPGEF4Q8WZA2 1011 aa12.13□□□□□ -0.47
APOBEC1-202ENST00000467171 CHMP4AQ9BY43 222 aa12.13□□□□□ -0.47
APOBEC1-202ENST00000467171 NLRP2Q9NX02 1062 aa12.13□□□□□ -0.47
APOBEC1-202ENST00000467171 DLG5Q8TDM6 1919 aa12.13□□□□□ -0.47
APOBEC1-202ENST00000467171 PTPRCP08575 1304 aa12.12□□□□□ -0.47
APOBEC1-202ENST00000467171 RNMTO43148 476 aaKnown RBP12.12□□□□□ -0.47
APOBEC1-202ENST00000467171 TATP17735 454 aaPredicted RBP12.12□□□□□ -0.47
APOBEC1-202ENST00000467171 C1orf141Q5JVX7 400 aa12.12□□□□□ -0.47
APOBEC1-202ENST00000467171 MIS18AQ9NYP9 233 aa12.12□□□□□ -0.47
APOBEC1-202ENST00000467171 LTBP4Q8N2S1 1624 aa12.11□□□□□ -0.47
APOBEC1-202ENST00000467171 COL18A1P39060 1754 aa12.11□□□□□ -0.47
APOBEC1-202ENST00000467171 SNPHO15079 494 aa12.11□□□□□ -0.47
APOBEC1-202ENST00000467171 HOXB7P09629 217 aa12.11□□□□□ -0.47
APOBEC1-202ENST00000467171 CSB-PGBD3P0DP91 1061 aa12.11□□□□□ -0.47
APOBEC1-202ENST00000467171 KRT24Q2M2I5 525 aa12.11□□□□□ -0.47
APOBEC1-202ENST00000467171 ITPRIPQ8IWB1 547 aa12.11□□□□□ -0.47
APOBEC1-202ENST00000467171 RWDD1Q9H446 243 aaPredicted RBP12.11□□□□□ -0.47
APOBEC1-202ENST00000467171 ZBTB40Q9NUA8 1239 aa12.11□□□□□ -0.47
APOBEC1-202ENST00000467171 SPG7Q9UQ90 795 aa12.11□□□□□ -0.47
APOBEC1-202ENST00000467171 PCDHB15Q9Y5E8 787 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms